Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0305000-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:10816009:10820322:-1 gene:Os03g0305000 gene_biotype:protein_coding transcript_biotype:protein_coding description:AMP-binding protein. (Os03t0305000-01)
Sequence	ATGGCGGCGGAGAGGGACATCGACGACCTGCCGCGGGGGGGCGCCAACTACACGGCGCTC ACGCCGCTCTGGTTCCTGGAGCGCGCCGCGCTGGCGCACCCGGCGCGGGCATCCGTCGTG CACGGCCCCGTGCGCTACACCTGGGCCGACACCTACCGCCGATGCCGCCGCCTCGCCTCC GCCCTCGAGCGCCGGTCCGTCGGCCACGGGAGCACGGTAGCTGTAATAGCTCCAAATATC CCAGCAGTATATGAGGCCCATTTTGGAGTTCCAATGGCTGGAGCAGTGGTGAACTGCGTC AACATTCGATTAAATGCTCCTACTGTTGCATTTCTCTTGGAGCACTCATCAGCGGAAGTT GTGATGGTTGACCAGGAATTTTTCTCCCTAGCAGAGGATTCTCTGAGGATTATTGCGGAG CAAAAGAAAGGAGCTTTCAAACAGCCACTTCTAATTGTTATTGGTGATCAAACTTGTGAT CCCGTGTCCCTCAAAAGTGCTTTGAGTAAAGGAGCCATTGAGTATGAGGAGTTTCTGGAA ACTGGCGATCCTGAATTTGCCTGGAAACCACCACAGGATGAATGGAAGAGTATTGCCTTA GGTTATACTTCCGGGACAACTTCCAACCCAAAGGGCGTGGTACTGCATCACAGGGGTGCT TACCTAATGTCACTGAGTGGTGCTCTGGTATGGGGAATGAATGAAGGCGCTGTTTATTTG TGGACTTTGCCGATGTTCCACTGTAATGGCTGGTGCTATACATGGACACTTGCTGCTCTT TGTGGAACAAGCATTTGTCTTCGTCAGGTTACAGCAAAGGCCATCTTCTCGGCGATAGCC AACCAAGGCGTGACCCACTTCTGTGGTGCACCGGTTGTCCTCAACACCATCGTCAACGCT CCGCCGGCTGACGCCATCCTCCCCCTGCCGCGTGTCGTCAACGTCATGACCGCCGGCGCC GCGCCGCCGCCGTCGGTGCTCGCGTCCATGTCGAAGCTCGGTTTCCGCATCACCCACACC TACGGGCTGTCCGAGACGTACGGCCCGTCCACGGTGTGCGCGTGGAAGCCGGAGTGGGAC GAGCTGCCGGACGACGAGCGCGCCCGCCTCCACGCCCGCCAGGGCATCCGCTACGTGGGC CTCGAGGGCCTCGACGTCGTCGACCCGAAGACGATGGCGCCCGTCCCCGCCGACGGCTCG ACGCTCGGGGAGATCGTCATGCGCGGGAACGGCGTCATGAAGGGGTACCTCAAGAACCCC AGGGCGAACGCGGAGGCGTTCGAGAACGGGTGGTTCCACTCCGGCGACCTCGGCGTGAAG CACACCGACGGGTACATCGAGGTGAAGGACAGGGCTAAGGACATCATCATCTCCGGCGGG GAGAACATCAGCAGCCTGGAGGTGGAGAAGGCGGTGTACCAGCACCCGGCGGTGCTGGAG GCGTCGGTGGTGGCGCGGGCCGACGAGCAGTGGGGGGAGTCGCCATGCGCGTTCGTGACG CCCAAGGACGGCGCCGACAGCTCCGACGAGGCGGCACTCGCCGGCGACATCATGCGGTTC TGCCGGGAGAGGCTGCCGGGGTACTGGGTGCCCAAGTCCGTCGTGTTCGGGCCGCTGCCC AAGACGGCGACGGGGAAGATCAAGAAGCACGAGCTGAGGGCCAAGGCCAAGGAATTGGGC CCGGTCCGGAAGAGCAGGATGTGA

Peptide Sequence

PEP ID	Os03t0305000-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:10816009:10820322:-1 gene:Os03g0305000 transcript:Os03t0305000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:AMP-binding protein. (Os03t0305000-01)
Sequence	MAAERDIDDLPRGGANYTALTPLWFLERAALAHPARASVVHGPVRYTWADTYRRCRRLAS ALERRSVGHGSTVAVIAPNIPAVYEAHFGVPMAGAVVNCVNIRLNAPTVAFLLEHSSAEV VMVDQEFFSLAEDSLRIIAEQKKGAFKQPLLIVIGDQTCDPVSLKSALSKGAIEYEEFLE TGDPEFAWKPPQDEWKSIALGYTSGTTSNPKGVVLHHRGAYLMSLSGALVWGMNEGAVYL WTLPMFHCNGWCYTWTLAALCGTSICLRQVTAKAIFSAIANQGVTHFCGAPVVLNTIVNA PPADAILPLPRVVNVMTAGAAPPPSVLASMSKLGFRITHTYGLSETYGPSTVCAWKPEWD ELPDDERARLHARQGIRYVGLEGLDVVDPKTMAPVPADGSTLGEIVMRGNGVMKGYLKNP RANAEAFENGWFHSGDLGVKHTDGYIEVKDRAKDIIISGGENISSLEVEKAVYQHPAVLE ASVVARADEQWGESPCAFVTPKDGADSSDEAALAGDIMRFCRERLPGYWVPKSVVFGPLP KTATGKIKKHELRAKAKELGPVRKSRM

Transcript Sequence

Transcript ID	Os03t0305000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:10816009:10820322:-1 gene:Os03g0305000 gene_biotype:protein_coding transcript_biotype:protein_coding description:AMP-binding protein. (Os03t0305000-01)
Sequence	GCCAAGCCACGCGAGACGAGTGCGTGCGTGCGGAGAGAGAGAGAGAGAGAGAGAGAGAGA GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCATCGCGGGGATGGCGGCGGAGAGGGA CATCGACGACCTGCCGCGGGGGGGCGCCAACTACACGGCGCTCACGCCGCTCTGGTTCCT GGAGCGCGCCGCGCTGGCGCACCCGGCGCGGGCATCCGTCGTGCACGGCCCCGTGCGCTA CACCTGGGCCGACACCTACCGCCGATGCCGCCGCCTCGCCTCCGCCCTCGAGCGCCGGTC CGTCGGCCACGGGAGCACGGTAGCTGTAATAGCTCCAAATATCCCAGCAGTATATGAGGC CCATTTTGGAGTTCCAATGGCTGGAGCAGTGGTGAACTGCGTCAACATTCGATTAAATGC TCCTACTGTTGCATTTCTCTTGGAGCACTCATCAGCGGAAGTTGTGATGGTTGACCAGGA ATTTTTCTCCCTAGCAGAGGATTCTCTGAGGATTATTGCGGAGCAAAAGAAAGGAGCTTT CAAACAGCCACTTCTAATTGTTATTGGTGATCAAACTTGTGATCCCGTGTCCCTCAAAAG TGCTTTGAGTAAAGGAGCCATTGAGTATGAGGAGTTTCTGGAAACTGGCGATCCTGAATT TGCCTGGAAACCACCACAGGATGAATGGAAGAGTATTGCCTTAGGTTATACTTCCGGGAC AACTTCCAACCCAAAGGGCGTGGTACTGCATCACAGGGGTGCTTACCTAATGTCACTGAG TGGTGCTCTGGTATGGGGAATGAATGAAGGCGCTGTTTATTTGTGGACTTTGCCGATGTT CCACTGTAATGGCTGGTGCTATACATGGACACTTGCTGCTCTTTGTGGAACAAGCATTTG TCTTCGTCAGGTTACAGCAAAGGCCATCTTCTCGGCGATAGCCAACCAAGGCGTGACCCA CTTCTGTGGTGCACCGGTTGTCCTCAACACCATCGTCAACGCTCCGCCGGCTGACGCCAT CCTCCCCCTGCCGCGTGTCGTCAACGTCATGACCGCCGGCGCCGCGCCGCCGCCGTCGGT GCTCGCGTCCATGTCGAAGCTCGGTTTCCGCATCACCCACACCTACGGGCTGTCCGAGAC GTACGGCCCGTCCACGGTGTGCGCGTGGAAGCCGGAGTGGGACGAGCTGCCGGACGACGA GCGCGCCCGCCTCCACGCCCGCCAGGGCATCCGCTACGTGGGCCTCGAGGGCCTCGACGT CGTCGACCCGAAGACGATGGCGCCCGTCCCCGCCGACGGCTCGACGCTCGGGGAGATCGT CATGCGCGGGAACGGCGTCATGAAGGGGTACCTCAAGAACCCCAGGGCGAACGCGGAGGC GTTCGAGAACGGGTGGTTCCACTCCGGCGACCTCGGCGTGAAGCACACCGACGGGTACAT CGAGGTGAAGGACAGGGCTAAGGACATCATCATCTCCGGCGGGGAGAACATCAGCAGCCT GGAGGTGGAGAAGGCGGTGTACCAGCACCCGGCGGTGCTGGAGGCGTCGGTGGTGGCGCG GGCCGACGAGCAGTGGGGGGAGTCGCCATGCGCGTTCGTGACGCCCAAGGACGGCGCCGA CAGCTCCGACGAGGCGGCACTCGCCGGCGACATCATGCGGTTCTGCCGGGAGAGGCTGCC GGGGTACTGGGTGCCCAAGTCCGTCGTGTTCGGGCCGCTGCCCAAGACGGCGACGGGGAA GATCAAGAAGCACGAGCTGAGGGCCAAGGCCAAGGAATTGGGCCCGGTCCGGAAGAGCAG GATGTGAGCCCATCAATCTTGAGCTCTCTGAATTTGCTGCGCTCTGAACTGAACTCTTGT TACTGTATCTGCTATGGTCATCGTCACATCATCGTTGCCACGAATTTTAGGACCGTGTTG TAAACTGTAATCTCATACTCATATTTTTATATCACGAACACACCTGATCCTGATGAGTGA ATTTTTAAAGAGCTTGAAATAATACAAAAGCAGGTGAATGAACACTGTTGCC