Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0304400-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:10752594:10759841:1 gene:Os03g0304400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os03t0304400-01)
Sequence	ATGGCCTCTCCCATCAGCGGCAGCGACGACGATGACGAGCACCTCTTCGCCGGCGTCCGC TTCTTCCTCGTCGGGTTCGACCCCCTCTCGGAGTCCCAGTATCGGTCGGAGATGGTGCGG CGCAGCGGCGTGGACGCCGGGAGGTTCGGCAGCGGGTGCACCCACGTCATCGTTTGCGGC CTCGTCTATGATGACCCGGCATGCGTGGCGGCGCGGGCGGAAGGGAAAAAGGTCGTCACC GAGCTTTGGGTGGAAGCTAGCTTGGATCGGGGAATGCTTGCCGATGCCGATAGGGTTATG TATTGGCCGGTGCGAGATTTGAATGGAATAGCAGGCAGTGAATCATTACGCATTTGCTTG ACGGGCTACCAAAGAAGTGACCGCGAAGATATAATGAGCATGGTTTCTTTGATGGGAGCG CAATTCTCCAAATCTTTGAATCCAGACGTAGTCACTCACCTTATTTGCTATAAATTTGAA GGTGAGAAGTATGAGGCTGCTAAAAAGGCGAAGTTGAAGTTCAACTTTAACATCAAACTT GTTAATCACCGGTGGTTGGAAGACTGCTTAAAGTGTTGGAAAATTCTTCCAGTAGATGAT TACAGCAAAAGTAGTTGGGAACTAGAGATAATGGAGGCGCAAGCCAAGGACTCAGAAGAT GAAGAAGATGTAGGCCAAAGATCATTTAGAAATAAGATTGTCAGATCCACTCTGAACCCA AAAGGTAGCGCGGGAACTTCTGCCAACCCTGTTGTGAATGCACCAATTCGGTCACCGACT ATTTCGAGTGGTAATATAGGGATGGTTTTGGAAAAACAGCCGAACATTCCTGGAGAGATC AGGAAAGCAGAAGATGCCGTCAACAGGATACATGATGTCGCAGTCCAAGGCACTCCTAGA ACTAGATTGGCAATGTCTGCTAACACTGATTTTAGCACACCCAGTCAGATTCCATTTATT CATAGTGATAGTAGAGGGGATGCTGCAGTAAGAGATTTGAAAAATGCAGATCAGATCCAG GGGAATAAACACAAAGATGTTGGCACAAAGACACTTGATGTTACATCCGGTGCATCAGGC ACTCCATGCTCAAGCAAGATGGTTGTTTCTGCTAACCATAACGTGCATTCCTTAAACAAG ACAAATTTTGTGGAGGATCATGGCGACACTGATGCTAGCAAAGCTGACTTGACCACCCCA TCCAGAGAAATTCTGCCTGCAAATGTACTTGATTCATCTAATGTTGCCAGAGGGCGAAGT CAAGAGGATTATGGAGCCACATGTACTCCTGATGCAGCAGCTGGTCAGTCAACCATTAAT GACAATGTCACCAATAATAATATTGGTTTGAAGTCAGGAAACAATGCTTCGCTCAACATC AACAACAAAAGTTCTTTGAAACCCTTAGAGAAGTCGGTACTGCCTGAACAATATTCAGCT AACCGTATAGGACCACTTCAGGGGGCTGATGGGAGCATGATGAGATCTGATTCTAGTATC TCGACAGCACGTAAGGGAGATAAAATAATTGCTGATCTAGCTGGCGTCCAGGTTCTGAAA GGTGGTGAAAATATACAGGATGAGAATGTACTGGATGGTGCATATTCCCAAAAAAAGAAG TGCTCCATTTCCCCAGTTTTGTTCAAAGTGCAAAATGGAGATACGGGGAAAGAAACTGGT GCGTTGAACTCTCCTTCTGCAAATAGGCTTAGTGACACATCTGAACCAGCAATTTGGTCA TCTGTAGGAACAAATCCAAGTGAAGCTAATAATGTTGATTTGGGAAAGCAACAGTCTGGC TCATCTAAATCAAGATCTAGGACTGCACTCAAGCATGGTAATCTGGTTGATGGAATCAAG CTCCCTGAATATTCTTCAAGTGAGACAAATGCGCAGCCTCCACCGAAACCAAAAGAATTG CTCGCCACAAGCCTTTCAGCCACTGTTCACGATGTAAAGAGATGTCCAGATTTCTCTTTT CAAAACAAGGATGGTGATTATGCACAAGATAGTGGTAATGCATTGAATCAAGATGGCTCG CCACTGATGCGCAAGACAGAAAACGTTCTTGCAAAGGTCAGAACATCTGACATATCTTTA CACAGTTCAAGGAAATCAAAACTTGTTCCCTCTTCTGGAAATGGTGATACTGAGATGTCT GATGCACTTGATATTGAAAAAAATAAGGCAGCAGTGGCTTCAAATTGCAAGCCTGAGAAA GTGGTACCTGATGAAAATATAAAAGCAGACCAGCTTAAAGACTTTCCAGGTACTTCAAAC AATGTTCTGCGCCAAACAGGTTATTTAAAGAAAGTAGCATCTCGTAAAGGAATGAAAGCA AGCACAAAGAGACCTCGTAGTGCTAGCAAGGTGGTTGATGAGCCAGTAGTTGACGATGGT AAGACTAAGACAGTGGTTTCTGAGTCAGAGCCTGATAAAATGATTGCTCACAAGCACATT GGTGAAACAGCTAAAGATGGCCCTGATAGTGTAAACGCAGCAGAACACAGAACAAATTCT TCAGACAAAGTTCTTACAGATGGAGCGAGTAGGATTTCCAGAAGACTGCAGAATGTTCAC ACCATGAAAAATGATAGACATGCAGCTTCCAACTTGGAATCCAGTAAGATGATTTCTGAG GAAAATACTGGAATTGGGATAACCCCTAAGAAGTTTGTGAGTAATGCAACTACTGAGGGA CATCAAACAAATTCACCGAAAATGTTACCCAATACCAGTATGAGGAATACATTTGCCAAG AGGTCTCGGGTATCTGACACCAAAATGACTGGTGAATCATCAGCTGATAAAACTGAAACA GTGGCTGGCAAGTCACTATTTGATGACTTATTTCCTTCCCAAAACATTGATCACCCTAAA AAGCTTTCAAGTAGTGCAAGTGCTGACGGCTGTGGATCACTATCCTGTAAGAATGCATCG CCTGCCAGAGTTAGGAATGCAGTTGCCAAGAGGAAAATAAAAGCTCTAGAAGACAAGTCA GACAGCAAGCTTGGAAAAATTGGTGGTGCCATTGTATCTGCAGCTAAAGCTGTGGCATCA AGGGGAATTGAAGAAAGCTCATGCAACATCAACAAAGTAAGTTCTGATCAAAATTCTGTG AAGACCGATGGAATGAGAGATGTATCTGGATTATTTTCGAGTGATACTTCTGTGATAGAC AGGTCAGAAAATCTGAATAACTCTAAGTTGAGATGCAGCAAAAGAAATAAATCTCTTTCT TTAGACCATGAAAAGGAGAATATGCAAGACAATGGTACTCTCAGTTCTAAATCCAATGGT AGAACTGCTATTATGAATTCCAACTTAGATGCAAATTCGATGAAGCACGGTGCAAATATG TTCAATGAGCCCAATAGAATAAAAGGAAACGGACCTGGCACCTTGATCACGCCTGAGCCT ACATGTTTTATTTTAAGTGGACATCGCCAACAGAGAAAGGACTATAGATCAATACTTCGG TGCCTGAAGGCACGAGTTTGCAGGGATTCACATCATTGGTCATACCAAGCGACACATTTT ATTGCCCCAGACCCTCTCAAGAGAACTGAAAAATTCTTTGCAGCTGCAGCAGCTGGCAAG TGGATACTGAAAACTGATTACTTGACCTCTTGCAATGAGGTTGGCAAATTGTTGGACGAA GAACCATTTGAATGGTCTGGTACAGGCCTTAATGACGGGGAAACAATCAGCTTTGAAGCT CCCAAGAAATGGCGTGTTTTGAGGCAGCAGATGGGCCATGGTGCCTTCTATGGGATGCAG ATAATTGTATATGGACAGCTCGTTAGTCCATCGCTGGATACAGTAAAGCGTGCAGTACGA TCTGGCGATGGCACCATCTTAGCAACCTCGCCACCGTACACACGGTTCTTGAACTCTGGC GTCGACTTCGCTGTGGTATCTTCGGCCATGCCAAGTGCAGACGCATGGGTTCAACAATTC ATCAGTCACGATATTCCTTGTATCACTGCTGATTATCTTGTTGAGTACGTCTGCAAGCAT GGGCATCCGCTCGACAGGCATGTTCTCTTCAACACAAACGATCTGGCCAACAAGTCCCTC AAGAAACTACTGCAAAACCAGCAAGAGGTGGCCACAGATGTACTGAAGCCACAGGAGGAC GGAGATCCCGACGACCTGAGCTGCTCGGCGTGCGGGAGTACGGACCGGGGCGAGGTGATG CTCATCTGCGGCAACGAGGATGGCTCGACCGGCTGCGGTGTAGGTATGCACATCGACTGC TGCGACCCTCCCCTGGAAGCTGTCCCAGAACATGACTGGCTGTGCCCCCAGTGCGAAATG CCCAAAGCGACGAAGAAATCTGCGTCACGCGTAGCTAGCAAATCGAGAGTATCCAAGCGA AAAAGGTGA

Peptide Sequence

PEP ID	Os03t0304400-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:10752594:10759841:1 gene:Os03g0304400 transcript:Os03t0304400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os03t0304400-01)
Sequence	MASPISGSDDDDEHLFAGVRFFLVGFDPLSESQYRSEMVRRSGVDAGRFGSGCTHVIVCG LVYDDPACVAARAEGKKVVTELWVEASLDRGMLADADRVMYWPVRDLNGIAGSESLRICL TGYQRSDREDIMSMVSLMGAQFSKSLNPDVVTHLICYKFEGEKYEAAKKAKLKFNFNIKL VNHRWLEDCLKCWKILPVDDYSKSSWELEIMEAQAKDSEDEEDVGQRSFRNKIVRSTLNP KGSAGTSANPVVNAPIRSPTISSGNIGMVLEKQPNIPGEIRKAEDAVNRIHDVAVQGTPR TRLAMSANTDFSTPSQIPFIHSDSRGDAAVRDLKNADQIQGNKHKDVGTKTLDVTSGASG TPCSSKMVVSANHNVHSLNKTNFVEDHGDTDASKADLTTPSREILPANVLDSSNVARGRS QEDYGATCTPDAAAGQSTINDNVTNNNIGLKSGNNASLNINNKSSLKPLEKSVLPEQYSA NRIGPLQGADGSMMRSDSSISTARKGDKIIADLAGVQVLKGGENIQDENVLDGAYSQKKK CSISPVLFKVQNGDTGKETGALNSPSANRLSDTSEPAIWSSVGTNPSEANNVDLGKQQSG SSKSRSRTALKHGNLVDGIKLPEYSSSETNAQPPPKPKELLATSLSATVHDVKRCPDFSF QNKDGDYAQDSGNALNQDGSPLMRKTENVLAKVRTSDISLHSSRKSKLVPSSGNGDTEMS DALDIEKNKAAVASNCKPEKVVPDENIKADQLKDFPGTSNNVLRQTGYLKKVASRKGMKA STKRPRSASKVVDEPVVDDGKTKTVVSESEPDKMIAHKHIGETAKDGPDSVNAAEHRTNS SDKVLTDGASRISRRLQNVHTMKNDRHAASNLESSKMISEENTGIGITPKKFVSNATTEG HQTNSPKMLPNTSMRNTFAKRSRVSDTKMTGESSADKTETVAGKSLFDDLFPSQNIDHPK KLSSSASADGCGSLSCKNASPARVRNAVAKRKIKALEDKSDSKLGKIGGAIVSAAKAVAS RGIEESSCNINKVSSDQNSVKTDGMRDVSGLFSSDTSVIDRSENLNNSKLRCSKRNKSLS LDHEKENMQDNGTLSSKSNGRTAIMNSNLDANSMKHGANMFNEPNRIKGNGPGTLITPEP TCFILSGHRQQRKDYRSILRCLKARVCRDSHHWSYQATHFIAPDPLKRTEKFFAAAAAGK WILKTDYLTSCNEVGKLLDEEPFEWSGTGLNDGETISFEAPKKWRVLRQQMGHGAFYGMQ IIVYGQLVSPSLDTVKRAVRSGDGTILATSPPYTRFLNSGVDFAVVSSAMPSADAWVQQF ISHDIPCITADYLVEYVCKHGHPLDRHVLFNTNDLANKSLKKLLQNQQEVATDVLKPQED GDPDDLSCSACGSTDRGEVMLICGNEDGSTGCGVGMHIDCCDPPLEAVPEHDWLCPQCEM PKATKKSASRVASKSRVSKRKR

Transcript Sequence

Transcript ID	Os03t0304400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:10752594:10759841:1 gene:Os03g0304400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os03t0304400-01)
Sequence	GGAGGAGGAGAAGTAGAAATCCCCAAATCAAAGGGACAAACCCTAGCCCCTGCTCCGATC CAGACGCCCCCTCGCATCAATGGCCTCTCCCATCAGCGGCAGCGACGACGATGACGAGCA CCTCTTCGCCGGCGTCCGCTTCTTCCTCGTCGGGTTCGACCCCCTCTCGGAGTCCCAGTA TCGGTCGGAGATGGTGCGGCGCAGCGGCGTGGACGCCGGGAGGTTCGGCAGCGGGTGCAC CCACGTCATCGTTTGCGGCCTCGTCTATGATGACCCGGCATGCGTGGCGGCGCGGGCGGA AGGGAAAAAGGTCGTCACCGAGCTTTGGGTGGAAGCTAGCTTGGATCGGGGAATGCTTGC CGATGCCGATAGGGTTATGTATTGGCCGGTGCGAGATTTGAATGGAATAGCAGGCAGTGA ATCATTACGCATTTGCTTGACGGGCTACCAAAGAAGTGACCGCGAAGATATAATGAGCAT GGTTTCTTTGATGGGAGCGCAATTCTCCAAATCTTTGAATCCAGACGTAGTCACTCACCT TATTTGCTATAAATTTGAAGGTGAGAAGTATGAGGCTGCTAAAAAGGCGAAGTTGAAGTT CAACTTTAACATCAAACTTGTTAATCACCGGTGGTTGGAAGACTGCTTAAAGTGTTGGAA AATTCTTCCAGTAGATGATTACAGCAAAAGTAGTTGGGAACTAGAGATAATGGAGGCGCA AGCCAAGGACTCAGAAGATGAAGAAGATGTAGGCCAAAGATCATTTAGAAATAAGATTGT CAGATCCACTCTGAACCCAAAAGGTAGCGCGGGAACTTCTGCCAACCCTGTTGTGAATGC ACCAATTCGGTCACCGACTATTTCGAGTGGTAATATAGGGATGGTTTTGGAAAAACAGCC GAACATTCCTGGAGAGATCAGGAAAGCAGAAGATGCCGTCAACAGGATACATGATGTCGC AGTCCAAGGCACTCCTAGAACTAGATTGGCAATGTCTGCTAACACTGATTTTAGCACACC CAGTCAGATTCCATTTATTCATAGTGATAGTAGAGGGGATGCTGCAGTAAGAGATTTGAA AAATGCAGATCAGATCCAGGGGAATAAACACAAAGATGTTGGCACAAAGACACTTGATGT TACATCCGGTGCATCAGGCACTCCATGCTCAAGCAAGATGGTTGTTTCTGCTAACCATAA CGTGCATTCCTTAAACAAGACAAATTTTGTGGAGGATCATGGCGACACTGATGCTAGCAA AGCTGACTTGACCACCCCATCCAGAGAAATTCTGCCTGCAAATGTACTTGATTCATCTAA TGTTGCCAGAGGGCGAAGTCAAGAGGATTATGGAGCCACATGTACTCCTGATGCAGCAGC TGGTCAGTCAACCATTAATGACAATGTCACCAATAATAATATTGGTTTGAAGTCAGGAAA CAATGCTTCGCTCAACATCAACAACAAAAGTTCTTTGAAACCCTTAGAGAAGTCGGTACT GCCTGAACAATATTCAGCTAACCGTATAGGACCACTTCAGGGGGCTGATGGGAGCATGAT GAGATCTGATTCTAGTATCTCGACAGCACGTAAGGGAGATAAAATAATTGCTGATCTAGC TGGCGTCCAGGTTCTGAAAGGTGGTGAAAATATACAGGATGAGAATGTACTGGATGGTGC ATATTCCCAAAAAAAGAAGTGCTCCATTTCCCCAGTTTTGTTCAAAGTGCAAAATGGAGA TACGGGGAAAGAAACTGGTGCGTTGAACTCTCCTTCTGCAAATAGGCTTAGTGACACATC TGAACCAGCAATTTGGTCATCTGTAGGAACAAATCCAAGTGAAGCTAATAATGTTGATTT GGGAAAGCAACAGTCTGGCTCATCTAAATCAAGATCTAGGACTGCACTCAAGCATGGTAA TCTGGTTGATGGAATCAAGCTCCCTGAATATTCTTCAAGTGAGACAAATGCGCAGCCTCC ACCGAAACCAAAAGAATTGCTCGCCACAAGCCTTTCAGCCACTGTTCACGATGTAAAGAG ATGTCCAGATTTCTCTTTTCAAAACAAGGATGGTGATTATGCACAAGATAGTGGTAATGC ATTGAATCAAGATGGCTCGCCACTGATGCGCAAGACAGAAAACGTTCTTGCAAAGGTCAG AACATCTGACATATCTTTACACAGTTCAAGGAAATCAAAACTTGTTCCCTCTTCTGGAAA TGGTGATACTGAGATGTCTGATGCACTTGATATTGAAAAAAATAAGGCAGCAGTGGCTTC AAATTGCAAGCCTGAGAAAGTGGTACCTGATGAAAATATAAAAGCAGACCAGCTTAAAGA CTTTCCAGGTACTTCAAACAATGTTCTGCGCCAAACAGGTTATTTAAAGAAAGTAGCATC TCGTAAAGGAATGAAAGCAAGCACAAAGAGACCTCGTAGTGCTAGCAAGGTGGTTGATGA GCCAGTAGTTGACGATGGTAAGACTAAGACAGTGGTTTCTGAGTCAGAGCCTGATAAAAT GATTGCTCACAAGCACATTGGTGAAACAGCTAAAGATGGCCCTGATAGTGTAAACGCAGC AGAACACAGAACAAATTCTTCAGACAAAGTTCTTACAGATGGAGCGAGTAGGATTTCCAG AAGACTGCAGAATGTTCACACCATGAAAAATGATAGACATGCAGCTTCCAACTTGGAATC CAGTAAGATGATTTCTGAGGAAAATACTGGAATTGGGATAACCCCTAAGAAGTTTGTGAG TAATGCAACTACTGAGGGACATCAAACAAATTCACCGAAAATGTTACCCAATACCAGTAT GAGGAATACATTTGCCAAGAGGTCTCGGGTATCTGACACCAAAATGACTGGTGAATCATC AGCTGATAAAACTGAAACAGTGGCTGGCAAGTCACTATTTGATGACTTATTTCCTTCCCA AAACATTGATCACCCTAAAAAGCTTTCAAGTAGTGCAAGTGCTGACGGCTGTGGATCACT ATCCTGTAAGAATGCATCGCCTGCCAGAGTTAGGAATGCAGTTGCCAAGAGGAAAATAAA AGCTCTAGAAGACAAGTCAGACAGCAAGCTTGGAAAAATTGGTGGTGCCATTGTATCTGC AGCTAAAGCTGTGGCATCAAGGGGAATTGAAGAAAGCTCATGCAACATCAACAAAGTAAG TTCTGATCAAAATTCTGTGAAGACCGATGGAATGAGAGATGTATCTGGATTATTTTCGAG TGATACTTCTGTGATAGACAGGTCAGAAAATCTGAATAACTCTAAGTTGAGATGCAGCAA AAGAAATAAATCTCTTTCTTTAGACCATGAAAAGGAGAATATGCAAGACAATGGTACTCT CAGTTCTAAATCCAATGGTAGAACTGCTATTATGAATTCCAACTTAGATGCAAATTCGAT GAAGCACGGTGCAAATATGTTCAATGAGCCCAATAGAATAAAAGGAAACGGACCTGGCAC CTTGATCACGCCTGAGCCTACATGTTTTATTTTAAGTGGACATCGCCAACAGAGAAAGGA CTATAGATCAATACTTCGGTGCCTGAAGGCACGAGTTTGCAGGGATTCACATCATTGGTC ATACCAAGCGACACATTTTATTGCCCCAGACCCTCTCAAGAGAACTGAAAAATTCTTTGC AGCTGCAGCAGCTGGCAAGTGGATACTGAAAACTGATTACTTGACCTCTTGCAATGAGGT TGGCAAATTGTTGGACGAAGAACCATTTGAATGGTCTGGTACAGGCCTTAATGACGGGGA AACAATCAGCTTTGAAGCTCCCAAGAAATGGCGTGTTTTGAGGCAGCAGATGGGCCATGG TGCCTTCTATGGGATGCAGATAATTGTATATGGACAGCTCGTTAGTCCATCGCTGGATAC AGTAAAGCGTGCAGTACGATCTGGCGATGGCACCATCTTAGCAACCTCGCCACCGTACAC ACGGTTCTTGAACTCTGGCGTCGACTTCGCTGTGGTATCTTCGGCCATGCCAAGTGCAGA CGCATGGGTTCAACAATTCATCAGTCACGATATTCCTTGTATCACTGCTGATTATCTTGT TGAGTACGTCTGCAAGCATGGGCATCCGCTCGACAGGCATGTTCTCTTCAACACAAACGA TCTGGCCAACAAGTCCCTCAAGAAACTACTGCAAAACCAGCAAGAGGTGGCCACAGATGT ACTGAAGCCACAGGAGGACGGAGATCCCGACGACCTGAGCTGCTCGGCGTGCGGGAGTAC GGACCGGGGCGAGGTGATGCTCATCTGCGGCAACGAGGATGGCTCGACCGGCTGCGGTGT AGGTATGCACATCGACTGCTGCGACCCTCCCCTGGAAGCTGTCCCAGAACATGACTGGCT GTGCCCCCAGTGCGAAATGCCCAAAGCGACGAAGAAATCTGCGTCACGCGTAGCTAGCAA ATCGAGAGTATCCAAGCGAAAAAGGTGATTTTTCTGCCTTTTTTTTCTGCTTTCACCCTG TTTTATTGAACAGAATAAACGGTGTGTTTATTTTCGTCCGTTGTAAAGTTTTTATCAGTG GCAGAGATGCTGTCTCGGCATTTCTGAGTGTAGTTTTTTCTCATTCTGCTGCTATACAGG CGTGTTTTCC