Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0301950-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:10645184:10646734:1 gene:Os03g0301950 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PEROXIN 11-2 description:Peroxisomal protein (Os03t0301950-01)
Sequence

ATGGTCACCGCCGCAGGCTCCCCCTCCTCCTCCTCAGCCCGCAAGCCAGCCTCCCGCCCG
CGGCTGCCATGCCGCGACATCCTCGTCCACATCGAGGCCTACCTCTCCCGCCGCGACGGC
GTCGACAACCTCCTCAAGGTCTCCCTCTACGCCGCCCGCCTCGCCCTCGCCCTCGCCGCC
GGGCAGCCGCCGCTGCCCCACGCCGCCACCGCCCGCCTCAGGTCCTTCGAGTCCAGCGTC
GGCCTCAGCCGCAAGGCCTTCCGCCTCGGCAAGTTCGTCCAGTCCATCAACGCCCTCCGC
GCCGCCGCCTACCACCCCCACCCCCACGTGCACCCGCTCCTCGTCCTCCTCGCGTACGGC
GGCCAGGGCGTCTACAACTTCCTCGAGCAGTTCGCGTGGCTGGCCAAGGCCGGCCTCCTG
CCCGCGCGCCTCCTCCCCCGCCGCCTCCATCGCATCGGCGTCTGGGCGCAGCTGCTGGCG
CACGTCGGCTCCATCGCGATCAAGCTGGAGGAGGTGGCAGAGCTGGAGTGTGGCGTCGAG
GCGCGGCTCGAGGAAGGTTGCGGAGAGGAGAGCGAGGTGGTGAGAACGCTGAGCCGGAAG
CTGCTGCTCAAGCTGATGTCCCTTGTGCAGGACATGGTGGATTCCGCGATGACGGTAGGG
GACGTGACCGGCCGGAAGGGTTTGCTCGGCAGCTCGACGCTAATGGCGTCCGCCGGCTTG
CTGTCCGCGCTGATCAGCGTTCACAAGAACTGGAATTCGTGCTGA

Peptide Sequence

PEP ID

Os03t0301950-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:10645184:10646734:1 gene:Os03g0301950 transcript:Os03t0301950-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PEROXIN 11-2 description:Peroxisomal protein (Os03t0301950-01)
Sequence

MVTAAGSPSSSSARKPASRPRLPCRDILVHIEAYLSRRDGVDNLLKVSLYAARLALALAA
GQPPLPHAATARLRSFESSVGLSRKAFRLGKFVQSINALRAAAYHPHPHVHPLLVLLAYG
GQGVYNFLEQFAWLAKAGLLPARLLPRRLHRIGVWAQLLAHVGSIAIKLEEVAELECGVE
ARLEEGCGEESEVVRTLSRKLLLKLMSLVQDMVDSAMTVGDVTGRKGLLGSSTLMASAGL
LSALISVHKNWNSC

Transcript Sequence

Transcript ID

Os03t0301950-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:10645184:10646734:1 gene:Os03g0301950 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PEROXIN 11-2 description:Peroxisomal protein (Os03t0301950-01)
Sequence

GATGAGAGAGAGGAGGAAGGGAGAGAAGAAGAGGAAGAGCAAGGGGTGTGACATGGAAAC
CCTGACATGTAGGGCTCATATGGTCGCACGCTGACTCAATCGTCGCGTCATGGGTCCCAC
GCTGACTCAACCGTCAGATGGTTTTATAAGTTAAGAGATATTCTATATCTGGTATTATGG
TTGAGGACGATTACGTAACTCAATTACAAGTTGAGGATCTTCGGTGTACTTTTTTTCATA
CTGGGAGGAGGCATGTGGGATTGTGGGCCATCCACATGGTTGCGAGTTGCGACCCACAGC
AATGGCAGCAGTCTGACACCATTGTCGGTGGTCGAGGTGGCATTACCGACAGAGCAGAAC
AGAAGATGAGAAAGAGGGGAAAACGAACAAAGATAGCGATACATCAACTCAGGGTTAGTA
CATTGTCAAGTCTAAGCTTTGTGTCGTACAAAAACACAAAACGCTCACGAACTCCGCGGC
ACACAGGCTGCGACGAGACGACGACTCAAAGTGATCGCCGGGTTTCCCAGCGAAACGCCC
ATTCCTCTACCACGCTATAGCCAGCGTCGCACACGGAAACAACCGCACATAACACATTCG
CGCGCGCGCCAGCGCCATGGTCACCGCCGCAGGCTCCCCCTCCTCCTCCTCAGCCCGCAA
GCCAGCCTCCCGCCCGCGGCTGCCATGCCGCGACATCCTCGTCCACATCGAGGCCTACCT
CTCCCGCCGCGACGGCGTCGACAACCTCCTCAAGGTCTCCCTCTACGCCGCCCGCCTCGC
CCTCGCCCTCGCCGCCGGGCAGCCGCCGCTGCCCCACGCCGCCACCGCCCGCCTCAGGTC
CTTCGAGTCCAGCGTCGGCCTCAGCCGCAAGGCCTTCCGCCTCGGCAAGTTCGTCCAGTC
CATCAACGCCCTCCGCGCCGCCGCCTACCACCCCCACCCCCACGTGCACCCGCTCCTCGT
CCTCCTCGCGTACGGCGGCCAGGGCGTCTACAACTTCCTCGAGCAGTTCGCGTGGCTGGC
CAAGGCCGGCCTCCTGCCCGCGCGCCTCCTCCCCCGCCGCCTCCATCGCATCGGCGTCTG
GGCGCAGCTGCTGGCGCACGTCGGCTCCATCGCGATCAAGCTGGAGGAGGTGGCAGAGCT
GGAGTGTGGCGTCGAGGCGCGGCTCGAGGAAGGTTGCGGAGAGGAGAGCGAGGTGGTGAG
AACGCTGAGCCGGAAGCTGCTGCTCAAGCTGATGTCCCTTGTGCAGGACATGGTGGATTC
CGCGATGACGGTAGGGGACGTGACCGGCCGGAAGGGTTTGCTCGGCAGCTCGACGCTAAT
GGCGTCCGCCGGCTTGCTGTCCGCGCTGATCAGCGTTCACAAGAACTGGAATTCGTGCTG
AACTGAAAGCCCACCAAAGGTACATGTTATAAAACATGATGTAATTGAACAATAATTAAA
TCTTAAAGTGGTGAGAGTTTGAATTAGTAAATCAAATTACTCCTGGACTCTGGATGTCGG
GGTATAAATTAATCAAAAGGTGGTGCTGGTGCATTTGAGCGGATACAAAAA