Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0301200-02
CDS Infomation	cds chromosome:IRGSP-1.0:3:10599150:10601525:1 gene:Os03g0301200 gene_biotype:protein_coding transcript_biotype:protein_coding description:COBRA-like protein 7 precursor. (Os03t0301200-01);Glycosyl-phosphatidyl inositol-anchored, plant domain containing protein. (Os03t0301200-02)
Sequence	ATGGCGGGGTGTATTGTTGTTGTATTTGGGGTTCTGGTGCTGGTCGCGGGGATGGCGGCG GCGCCCACGCCGGACTGCAACGGCATCCTGCTCACCTACAACTTCGAGGGCCGCGCCAAG ATCCGGCCCTACGTGGCGGACAGGAACAAGCAGCCCTACTCGTTCAGGGCCAACGCCACC GTGCTCAACTCCGGGACGCGCCCGCTCAAGTCGTGGGCGATGCTCGTGACGTTCGGGTAC GGGGAGATCCTCGTCGGCGTCGATGGCGCCGTGCTCACCGGCGGCGGCGAGATGCCGTAC AACACCACCCAGGACGCCGGCAACGCGACGTCGTTCTCCGGCTACCCGCAGACCGACCTC CTCACCCCGATCGCCACCGCGGGGGACATCTCGCAGATCCAGGCCAAGGTCGGCATCGTC GGCACGCTCTTCGCCGGGCCAGGGCCGTTCGTGCCGCTCCCCACGGCGCTGTCGCTCGAC GACCCGGCGTACAGGTGCCCCCAGGAGACCAATGTTTCCTCCGGGGTGCTCTCCACCTGC TGCGTCCTCACCCCGGAGGCGGAGGCCAACGCCACCGTCATCAACGCCAACGCCACCGAC CCGACCAAGAACTTCCTCCCCCGCGGCACCGGCGACCTCGTCATCACCTACGACGTGCTC CAGGCCTACCCCTCGAGCTACCTCGCGCTCGTCACGCTCGACAACAACGCCAAGCTCGGC CGCCTCGACAACTGGCGGCTTTCCTGGGAGTGGCGGCGCGGCGAGTTCATCTACTCGATG AAGGGTGCGTACCCATCGGAGAAGGACACGACCGGCTGCATCTATGGGGCGGCAGGGCAG TACTATCAGAGCCTTGATTTCTCCCAGGTGCTCAACTGCGACAAGAAGCCGGTGATCCTT GACCTGCCTCTGTCCAGGTACAATGACACTCAGATTGGGAAGATTGACCATTGCTGCAGG AATGGCACAATCCTGCCGAAGTCCATGGATGAGACGCAGTCAAAATCAGCCTTCCAATTG CAGGTGTTCAAGATGCCACCGGACCTGAACCGGACAAAGCTCTTCCCACAGAGTTCCCTG ATCCAAGCGGGCTTGATTCAACGACTCTGGCGATCGCGACATGGCAGGTGGTTTGCAACA TTACCACGAGTAAGGGGGCGAAGCCGAAGTGCTGTGTAA

Peptide Sequence

PEP ID	Os03t0301200-02
PEP Infomation	pep chromosome:IRGSP-1.0:3:10599150:10601525:1 gene:Os03g0301200 transcript:Os03t0301200-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:COBRA-like protein 7 precursor. (Os03t0301200-01);Glycosyl-phosphatidyl inositol-anchored, plant domain containing protein. (Os03t0301200-02)
Sequence	MAGCIVVVFGVLVLVAGMAAAPTPDCNGILLTYNFEGRAKIRPYVADRNKQPYSFRANAT VLNSGTRPLKSWAMLVTFGYGEILVGVDGAVLTGGGEMPYNTTQDAGNATSFSGYPQTDL LTPIATAGDISQIQAKVGIVGTLFAGPGPFVPLPTALSLDDPAYRCPQETNVSSGVLSTC CVLTPEAEANATVINANATDPTKNFLPRGTGDLVITYDVLQAYPSSYLALVTLDNNAKLG RLDNWRLSWEWRRGEFIYSMKGAYPSEKDTTGCIYGAAGQYYQSLDFSQVLNCDKKPVIL DLPLSRYNDTQIGKIDHCCRNGTILPKSMDETQSKSAFQLQVFKMPPDLNRTKLFPQSSL IQAGLIQRLWRSRHGRWFATLPRVRGRSRSAV

Transcript Sequence

Transcript ID	Os03t0301200-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:10599150:10601525:1 gene:Os03g0301200 gene_biotype:protein_coding transcript_biotype:protein_coding description:COBRA-like protein 7 precursor. (Os03t0301200-01);Glycosyl-phosphatidyl inositol-anchored, plant domain containing protein. (Os03t0301200-02)
Sequence	GCATTCGCTAGCTCCTGATTCGGCCATGGCGGGGTGTATTGTTGTTGTATTTGGGGTTCT GGTGCTGGTCGCGGGGATGGCGGCGGCGCCCACGCCGGACTGCAACGGCATCCTGCTCAC CTACAACTTCGAGGGCCGCGCCAAGATCCGGCCCTACGTGGCGGACAGGAACAAGCAGCC CTACTCGTTCAGGGCCAACGCCACCGTGCTCAACTCCGGGACGCGCCCGCTCAAGTCGTG GGCGATGCTCGTGACGTTCGGGTACGGGGAGATCCTCGTCGGCGTCGATGGCGCCGTGCT CACCGGCGGCGGCGAGATGCCGTACAACACCACCCAGGACGCCGGCAACGCGACGTCGTT CTCCGGCTACCCGCAGACCGACCTCCTCACCCCGATCGCCACCGCGGGGGACATCTCGCA GATCCAGGCCAAGGTCGGCATCGTCGGCACGCTCTTCGCCGGGCCAGGGCCGTTCGTGCC GCTCCCCACGGCGCTGTCGCTCGACGACCCGGCGTACAGGTGCCCCCAGGAGACCAATGT TTCCTCCGGGGTGCTCTCCACCTGCTGCGTCCTCACCCCGGAGGCGGAGGCCAACGCCAC CGTCATCAACGCCAACGCCACCGACCCGACCAAGAACTTCCTCCCCCGCGGCACCGGCGA CCTCGTCATCACCTACGACGTGCTCCAGGCCTACCCCTCGAGCTACCTCGCGCTCGTCAC GCTCGACAACAACGCCAAGCTCGGCCGCCTCGACAACTGGCGGCTTTCCTGGGAGTGGCG GCGCGGCGAGTTCATCTACTCGATGAAGGGTGCGTACCCATCGGAGAAGGACACGACCGG CTGCATCTATGGGGCGGCAGGGCAGTACTATCAGAGCCTTGATTTCTCCCAGGTGCTCAA CTGCGACAAGAAGCCGGTGATCCTTGACCTGCCTCTGTCCAGGTACAATGACACTCAGAT TGGGAAGATTGACCATTGCTGCAGGAATGGCACAATCCTGCCGAAGTCCATGGATGAGAC GCAGTCAAAATCAGCCTTCCAATTGCAGGTGTTCAAGATGCCACCGGACCTGAACCGGAC AAAGCTCTTCCCACAGAGTTCCCTGATCCAAGCGGGCTTGATTCAACGACTCTGGCGATC GCGACATGGCAGGTGGTTTGCAACATTACCACGAGTAAGGGGGCGAAGCCGAAGTGCTGT GTAACCTTCTCGGCATACTACAATGATTCAGTGATCCCCTGCAACACCTGCGCCTGTGGG TGTCCGTCGAACCAGCGGGGTCCTACTTGCAGCACGACTGCTCAATCCATGCTCCTGCCA CCCGAGGCGCTGCTTGTGCCATTCGACAATCGCACACAGAAGGCATTGGCATGGGCCGAG TTGAAGCACTACAATGTGCCTAAGCCAATGCCTTGTGGTGATTACTGTGGCGTGAGCATC AATTGGCACATATCTACAGACTACAACAAGGGCTGGAGCGCTCGGATGACATTGTTCAAT TGGGACAATGTCGACTTGGCAAACTGGTTTGCTGCTATTGTCATGGACAAGGCTTATGAT GGTTTTGAGAAGGCGTACTCTTTCAATAGCACATCAGTTGGCAAGAACACCATCTTCATG CAAGGTCTTGAGGGGCTCAATTACCTGGTGAAGCAGACCAACATGAGTGGATCAGACTAC CTTGTGCCTGGGAAGCAGCAGTCAGTGCTCTCATTCACCAAGAAGCTGACTCCTGGCATC AATGTTGTTGCTGGAGATGGTTTCCCTTCAAAGGTCTTCTTCAACGGCGACGAGTGTGCA ATGCCTCAGAGGATTCCAATGAGCAATAGTGGATTCAGGACCCATCTCAGCAGTGTCCTC TCACTGGTTTTGGTCCTGGCTGCTTCGGCCTTCGTATTGCTTCAGCAATAATCCTGGCCG TTGCTCCGATTCTTTCATTCTTTCAGGTGGTTGGATCGACGCCATTTGTAAGAAACCTTT TTGTTTCTGGCGGTTTACTAGATGCGTAATGGTTGCTATGTAGCAGAATCTGGCAGCAAT TGTGCGGCGAGATGAACACATAGGGGGAGGAAACATTGTTGCAGACTTGCAACATAGCAT CAGGATCACTTTCCTGAATCCTGATGATATTTATTACTACATGTTTACATCAAGATGAGT GATATTGTACATCTCTGATTTAAGTTGGTGTAGTTGCCAGGAATGTCTTATGTTTAGTTA TGTTATATACAAAATACATTTTGCCA