Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0300500-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:10564710:10566806:-1 gene:Os03g0300500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PECTIN METHYLESTERASE 10 description:Similar to Pectin methylesterase 6 (Fragment). (Os03t0300500-01)
Sequence	ATGAGCAAAGGCGCGATCATCGGCGCGTCGACCGTGCTGGTGGTGGCGGTGGTGGCGGCG GTGTGCGTGGTGTCGTTCAAGAACGGGTCGAGCAATGCCAAGGAGGACGGCGAGCTGTCG ACGTCGGTGAAGTCGATCAAGTCGTTCTGCCAGCCGGTGGACTACCGGGAGACGTGCGAG ACCACGCTGGAGCAGACGGCGGGCAACGCGACGAACCCGACGGACCTCGCCAAGGCCATC TTCAAGGCGACGTCGGAGCGGATCGAGAAGGCGGTGAGGGAGTCCGCCGTGCTCAACGAC CTCAAGAACGACCCGCGCACGTCCGACGCGCTCAAGGACTGCGAGGAGCTGCTCGACTAC GCCATCGACGACCTCAAGACGACGTTCGACAAGCTCGGCGGGTTCCAGACGAGCAACTTC AAGCGCGCCGTGGACGACGTCAAGACGTGGCTCAGCTCGGCGCTGACGTACCAGGAGACG TGCCTCGACGGGTTCGAGAACTCTACGTCGACGGAGGCGTCGGAGAAGATGCGCAAGGCG CTCAAGAGCTCGCAGGAGCTGACGGAGAACATCCTCGCCATCGTGGACCAGTTCGCCGAC ACGCTGGCGAACCTGGACATCACCGGATTCAGCCGCCGGCTGCTCGGCGACGACGGCGTG CCCGTGTGGATGTCCAACGCGAAGCGCCGGCTGCTGGAGGCGACCCCGGGCTCCAAGGAG TTCAAGCCGGACGTGACGGTGGCGGCGGACGGCAGCGGCGACTTCAAGACCATCAATGAG GCGCTGGCCAAGGTGCCGGTCAAGAGCACGGGGACGTACGTGATGTACGTGAAGGCCGGG ACGTACAAGGAGTACGTGTCGGTGGCGCGCAACGTGACGAACCTGGTGATGATCGGCGAC GGCGCCACCAAGACCATCATCACGGGGAACAAGAGCTTCATGCTCAACATCACCACCAAG GACACGGCCACCATGGAGGCGATCGGCAACGGGTTCTTCATGCGCGGCATCGGCGTGGAG AACACGGCCGGGTCCAAGAACCACCAGGCGGTGGCGCTCCGCGTGCAGAGCGACCAGTCG GCGTTCTACGAGTGCCAGTTCGACGGGCACCAGGACACGCTCTACACCCACACCAGCAGG CAGTACTACCGCGACTGCACCATCACCGGCACCATCGACTTCATCTTCGGCAACGCGCAG GTGGTGCTCCAGAACTGCCGGATCCAGGTGCGCCGGTGCATGGACAACCAGCAGAACATC GTGACGGCGCAGGGGCGCAAGGAGAAGCACTCCGCGGGCGGCACGGTGATCCACAACTGC ACCATCGAGCCGCACGAGGACTTCAAGGCCGACGCCGCCAAGTTCAAGACGTTCCTCGGC CGCCCGTGGAAGGAGTACTCGCGGACGCTCTACATCCAGTCCGACATCGGCGGGTTCATC GACCCGCAGGGGTGGCTGCCGTGGCTCGGCGACTTCGGCCTCAACACCTGCTACTACGCC GAGGTGGAGAACCGCGGCGACGGCGCCGACATGAGCAAGCGCGCCAAGTGGAGAGGGGTC AAGACGGTCACGTACCAGCAGGCGCAGCAGAAGTACACCGTCGAGAGGTTCATCCAGGGA CAGACGTGGCTCCCAAAGTTCGGCGTGCCGTTCATCCCCGGCCTGTTGCCGCAGGAGCAG TCAGGGAGGATACACTGA

Peptide Sequence

PEP ID	Os03t0300500-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:10564710:10566806:-1 gene:Os03g0300500 transcript:Os03t0300500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PECTIN METHYLESTERASE 10 description:Similar to Pectin methylesterase 6 (Fragment). (Os03t0300500-01)
Sequence	MSKGAIIGASTVLVVAVVAAVCVVSFKNGSSNAKEDGELSTSVKSIKSFCQPVDYRETCE TTLEQTAGNATNPTDLAKAIFKATSERIEKAVRESAVLNDLKNDPRTSDALKDCEELLDY AIDDLKTTFDKLGGFQTSNFKRAVDDVKTWLSSALTYQETCLDGFENSTSTEASEKMRKA LKSSQELTENILAIVDQFADTLANLDITGFSRRLLGDDGVPVWMSNAKRRLLEATPGSKE FKPDVTVAADGSGDFKTINEALAKVPVKSTGTYVMYVKAGTYKEYVSVARNVTNLVMIGD GATKTIITGNKSFMLNITTKDTATMEAIGNGFFMRGIGVENTAGSKNHQAVALRVQSDQS AFYECQFDGHQDTLYTHTSRQYYRDCTITGTIDFIFGNAQVVLQNCRIQVRRCMDNQQNI VTAQGRKEKHSAGGTVIHNCTIEPHEDFKADAAKFKTFLGRPWKEYSRTLYIQSDIGGFI DPQGWLPWLGDFGLNTCYYAEVENRGDGADMSKRAKWRGVKTVTYQQAQQKYTVERFIQG QTWLPKFGVPFIPGLLPQEQSGRIH

Transcript Sequence

Transcript ID	Os03t0300500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:10564710:10566806:-1 gene:Os03g0300500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PECTIN METHYLESTERASE 10 description:Similar to Pectin methylesterase 6 (Fragment). (Os03t0300500-01)
Sequence	CTGGTAGGGGACGACGCATCGATCGATCCCGACGCCTTTGCGCGCGCGCGCAAAATCGAT CATTTGATACATATCTCGCGTGAATCGTCGACTGGTGGTTGCATTGTGTTGCAATGAGCA AAGGCGCGATCATCGGCGCGTCGACCGTGCTGGTGGTGGCGGTGGTGGCGGCGGTGTGCG TGGTGTCGTTCAAGAACGGGTCGAGCAATGCCAAGGAGGACGGCGAGCTGTCGACGTCGG TGAAGTCGATCAAGTCGTTCTGCCAGCCGGTGGACTACCGGGAGACGTGCGAGACCACGC TGGAGCAGACGGCGGGCAACGCGACGAACCCGACGGACCTCGCCAAGGCCATCTTCAAGG CGACGTCGGAGCGGATCGAGAAGGCGGTGAGGGAGTCCGCCGTGCTCAACGACCTCAAGA ACGACCCGCGCACGTCCGACGCGCTCAAGGACTGCGAGGAGCTGCTCGACTACGCCATCG ACGACCTCAAGACGACGTTCGACAAGCTCGGCGGGTTCCAGACGAGCAACTTCAAGCGCG CCGTGGACGACGTCAAGACGTGGCTCAGCTCGGCGCTGACGTACCAGGAGACGTGCCTCG ACGGGTTCGAGAACTCTACGTCGACGGAGGCGTCGGAGAAGATGCGCAAGGCGCTCAAGA GCTCGCAGGAGCTGACGGAGAACATCCTCGCCATCGTGGACCAGTTCGCCGACACGCTGG CGAACCTGGACATCACCGGATTCAGCCGCCGGCTGCTCGGCGACGACGGCGTGCCCGTGT GGATGTCCAACGCGAAGCGCCGGCTGCTGGAGGCGACCCCGGGCTCCAAGGAGTTCAAGC CGGACGTGACGGTGGCGGCGGACGGCAGCGGCGACTTCAAGACCATCAATGAGGCGCTGG CCAAGGTGCCGGTCAAGAGCACGGGGACGTACGTGATGTACGTGAAGGCCGGGACGTACA AGGAGTACGTGTCGGTGGCGCGCAACGTGACGAACCTGGTGATGATCGGCGACGGCGCCA CCAAGACCATCATCACGGGGAACAAGAGCTTCATGCTCAACATCACCACCAAGGACACGG CCACCATGGAGGCGATCGGCAACGGGTTCTTCATGCGCGGCATCGGCGTGGAGAACACGG CCGGGTCCAAGAACCACCAGGCGGTGGCGCTCCGCGTGCAGAGCGACCAGTCGGCGTTCT ACGAGTGCCAGTTCGACGGGCACCAGGACACGCTCTACACCCACACCAGCAGGCAGTACT ACCGCGACTGCACCATCACCGGCACCATCGACTTCATCTTCGGCAACGCGCAGGTGGTGC TCCAGAACTGCCGGATCCAGGTGCGCCGGTGCATGGACAACCAGCAGAACATCGTGACGG CGCAGGGGCGCAAGGAGAAGCACTCCGCGGGCGGCACGGTGATCCACAACTGCACCATCG AGCCGCACGAGGACTTCAAGGCCGACGCCGCCAAGTTCAAGACGTTCCTCGGCCGCCCGT GGAAGGAGTACTCGCGGACGCTCTACATCCAGTCCGACATCGGCGGGTTCATCGACCCGC AGGGGTGGCTGCCGTGGCTCGGCGACTTCGGCCTCAACACCTGCTACTACGCCGAGGTGG AGAACCGCGGCGACGGCGCCGACATGAGCAAGCGCGCCAAGTGGAGAGGGGTCAAGACGG TCACGTACCAGCAGGCGCAGCAGAAGTACACCGTCGAGAGGTTCATCCAGGGACAGACGT GGCTCCCAAAGTTCGGCGTGCCGTTCATCCCCGGCCTGTTGCCGCAGGAGCAGTCAGGGA GGATACACTGATCCATCGTGCGTCGTCTCGTCGGCCTATATATATGCTAGCGGGTAATTG TTTGCATCATGTTGCTGTCGTCGTCAACTCCTGTGATCTCTATAGCGTTCTCTGCTGTAC TCTAATCCATAGAAATGCATTCTTTTCTCCATAGAATTTGCGTACGCGTAGTACATTGCA TATACTAGTACTACTTAATTATATTTACGTGTTGTACGGGTTGTTACGAATCGATTATTG TTTTTACTGATCGACAAATGGTGAAACTAATAGATAAGGTTTGACAGAGTTTTACTT