Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0300000-02
CDS Infomation	cds chromosome:IRGSP-1.0:3:10547473:10548669:-1 gene:Os03g0300000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:xyloglucan 6-xylosytransferase 1, short root hair2 description:Similar to Xyloglucan 6-xylosyltransferase (EC 2.4.2.39) (AtXT1). (Os03t0300000-01);Similar to glycosyltransferase 5. (Os03t0300000-02)
Sequence	TGGGACGAGCAGCGGGCCGCGTGGCACCGCCGCCACCCGGAGACGCCGCCCTTCGTCAAC GACGTCAAGCCGCGGGTGCTGCTCGTCACGGGCTCCTCGCCCAAGCCGTGCGAGAACCCC GTCGGCGACCACTACCTCCTCAAGTCCATCAAGAACAAGATGGACTACTGCCGCGTCCAC GGCCTCGAGATCTTCTACAACATGGCGCTGCTCGACGCCGAGATGGCCGGATTCTGGGCC AAGCTCCCGCTCCTCCGCGCGCTGCTCCTCGCGCACCCGGAGATCGAGTTCCTCTGGTGG ATGGACTCCGACGCCATGTTCTCCGACATGGCATTCGAGCTGCCATGGGAGCGGTACGGC CCCTACAACCTCATCATGCACGGCTGGGATGAGATGGTCTACGACGACAAGAACTGGATT GGCCTCAACACAGGCAGCTTCTTGCTGCGCAACTGCCAATGGTCGCTTGATTTCCTTGAT ACATGGGCACCAATGGGACCAAAGGGCCCTGTCCGTATTGAGGCCGGGAAGGTTTTGACC AAGTACTTGAAGGATCGGCCGGTGTTTGAGGCTGATGATCAGTCGGCCATGGTATACATC CTTGCTACAGAGCGTGAGAAATGGGGTGACAAGGTGTACCTTGAGAATGGGTATTACCTC CATGGATATTGGGGTATCTTGGTTGATAGGTATGAGGAAATGCTTGAGAATTACCATCCA GGACTTGGTGATCACCGGTGGCCACTGGTCACTCACTTTGTCGGATGCAAGCCGTGTGGG AAGTTTGGGGATTACCCTGTGGAGAGGTGCCTCAAGCAGATGGAGCGTGCTTTCAATTTT GGGGATAATCAGATCTTGCAAATGTATGGGTTTACACACAAGTCGCTTGGCAGCAGGAAG GTGAAGAGGATCAGGAATGAGACTAGCAACCCACTTGATGTCAAGGATGAACTAGGGTTG CTCCACCCAGCATTCAAGGCCATGAAGACTACTTCTACGTGA

Peptide Sequence

PEP ID	Os03t0300000-02
PEP Infomation	pep chromosome:IRGSP-1.0:3:10547473:10548669:-1 gene:Os03g0300000 transcript:Os03t0300000-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:xyloglucan 6-xylosytransferase 1, short root hair2 description:Similar to Xyloglucan 6-xylosyltransferase (EC 2.4.2.39) (AtXT1). (Os03t0300000-01);Similar to glycosyltransferase 5. (Os03t0300000-02)
Sequence	WDEQRAAWHRRHPETPPFVNDVKPRVLLVTGSSPKPCENPVGDHYLLKSIKNKMDYCRVH GLEIFYNMALLDAEMAGFWAKLPLLRALLLAHPEIEFLWWMDSDAMFSDMAFELPWERYG PYNLIMHGWDEMVYDDKNWIGLNTGSFLLRNCQWSLDFLDTWAPMGPKGPVRIEAGKVLT KYLKDRPVFEADDQSAMVYILATEREKWGDKVYLENGYYLHGYWGILVDRYEEMLENYHP GLGDHRWPLVTHFVGCKPCGKFGDYPVERCLKQMERAFNFGDNQILQMYGFTHKSLGSRK VKRIRNETSNPLDVKDELGLLHPAFKAMKTTST

Transcript Sequence

Transcript ID	Os03t0300000-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:10547473:10548669:-1 gene:Os03g0300000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:xyloglucan 6-xylosytransferase 1, short root hair2 description:Similar to Xyloglucan 6-xylosyltransferase (EC 2.4.2.39) (AtXT1). (Os03t0300000-01);Similar to glycosyltransferase 5. (Os03t0300000-02)
Sequence	TGGGACGAGCAGCGGGCCGCGTGGCACCGCCGCCACCCGGAGACGCCGCCCTTCGTCAAC GACGTCAAGCCGCGGGTGCTGCTCGTCACGGGCTCCTCGCCCAAGCCGTGCGAGAACCCC GTCGGCGACCACTACCTCCTCAAGTCCATCAAGAACAAGATGGACTACTGCCGCGTCCAC GGCCTCGAGATCTTCTACAACATGGCGCTGCTCGACGCCGAGATGGCCGGATTCTGGGCC AAGCTCCCGCTCCTCCGCGCGCTGCTCCTCGCGCACCCGGAGATCGAGTTCCTCTGGTGG ATGGACTCCGACGCCATGTTCTCCGACATGGCATTCGAGCTGCCATGGGAGCGGTACGGC CCCTACAACCTCATCATGCACGGCTGGGATGAGATGGTCTACGACGACAAGAACTGGATT GGCCTCAACACAGGCAGCTTCTTGCTGCGCAACTGCCAATGGTCGCTTGATTTCCTTGAT ACATGGGCACCAATGGGACCAAAGGGCCCTGTCCGTATTGAGGCCGGGAAGGTTTTGACC AAGTACTTGAAGGATCGGCCGGTGTTTGAGGCTGATGATCAGTCGGCCATGGTATACATC CTTGCTACAGAGCGTGAGAAATGGGGTGACAAGGTGTACCTTGAGAATGGGTATTACCTC CATGGATATTGGGGTATCTTGGTTGATAGGTATGAGGAAATGCTTGAGAATTACCATCCA GGACTTGGTGATCACCGGTGGCCACTGGTCACTCACTTTGTCGGATGCAAGCCGTGTGGG AAGTTTGGGGATTACCCTGTGGAGAGGTGCCTCAAGCAGATGGAGCGTGCTTTCAATTTT GGGGATAATCAGATCTTGCAAATGTATGGGTTTACACACAAGTCGCTTGGCAGCAGGAAG GTGAAGAGGATCAGGAATGAGACTAGCAACCCACTTGATGTCAAGGATGAACTAGGGTTG CTCCACCCAGCATTCAAGGCCATGAAGACTACTTCTACGTGATAAGTGATAATTAGAGTA CAATGCCACGCGTTATTTCGTTCATTGTAGATCCTTTTGGGTCTAAAATCTTAAAAAGGT GTTCTTTTTGTAGACTTGGGTTGACAAGGGAGTTTGGGTTGGGATCAAACATCAAAGGAT GGATATCTATGTTGTAATGTGAAATTTTAGGAGAACAATGGTATGTTTATTGCTGGC