Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0298800-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:10478466:10482571:-1 gene:Os03g0298800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Spliceosomal protein. (Os03t0298800-01)
Sequence

ATGTTGTCCGGCGACATACCCCCGAACCAGACGGTCTACCTCAGGAACCTCAACGAGAAG
GTCAAGAAAGAAGAATTAAAGAGATCACTCTATGCGTTGTGCTCCCAATATGGGAGGATA
CTGGATGTGGTGGCCTTAAAAACACCTAAACTGAGGGGGCAGGCATGGGTGGTCTTCAGC
GAAATTACCGCCGCCACAAATGCTTTCCGTGGACTGCAGGAATTCGATTTTTATGGCAAA
AGAATGCGAGTACAATATGCGAAAACAAGATCTGACTGTCTTGCAACCGAAGATGGTTCT
ACTGCTCCAAAAGAGAAAAGAAAGAAGCAAGAGGAGAAAGCAGCGGAGAAAAAACGACGA
GCTGAAGAGGCGCAACAATCTGGTCCTAATGCTGCTGCCCAAAGCAATGGGACTGGTTAT
CAAGCCTCACGCCTGGGCAAGACTTCGCAAGAGCCACCTGCACCTCCAAACAATATCCTT
TTCATCCAGAACTTACCAGCTGAGACTACAAGCATGATGCTCCAGATCCTGTTCCAGCAG
TACCCTGGTTTCAGGGAAGTCCGGATGATCGAAGCCAAGCCAGGCATTGCTTTTGTGGAA
TACGAGGACGACAGCCAGTCTATGGTTGCAATGCAAGCTCTGCAGGGTTTCAAGATCACC
CCATACAACCCAATGGCTATATCCTACGCAAAGAAGTGA

Peptide Sequence

PEP ID

Os03t0298800-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:10478466:10482571:-1 gene:Os03g0298800 transcript:Os03t0298800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Spliceosomal protein. (Os03t0298800-01)
Sequence

MLSGDIPPNQTVYLRNLNEKVKKEELKRSLYALCSQYGRILDVVALKTPKLRGQAWVVFS
EITAATNAFRGLQEFDFYGKRMRVQYAKTRSDCLATEDGSTAPKEKRKKQEEKAAEKKRR
AEEAQQSGPNAAAQSNGTGYQASRLGKTSQEPPAPPNNILFIQNLPAETTSMMLQILFQQ
YPGFREVRMIEAKPGIAFVEYEDDSQSMVAMQALQGFKITPYNPMAISYAKK

Transcript Sequence

Transcript ID

Os03t0298800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:10478466:10482571:-1 gene:Os03g0298800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Spliceosomal protein. (Os03t0298800-01)
Sequence

CCTCTCTCCTGCTCGTCTCGTCTCCCTTCCTCCTCGTCTTCGGCGGCGGCGCGGCGGAGA
TGTTGTCCGGCGACATACCCCCGAACCAGACGGTCTACCTCAGGAACCTCAACGAGAAGG
TCAAGAAAGAAGAATTAAAGAGATCACTCTATGCGTTGTGCTCCCAATATGGGAGGATAC
TGGATGTGGTGGCCTTAAAAACACCTAAACTGAGGGGGCAGGCATGGGTGGTCTTCAGCG
AAATTACCGCCGCCACAAATGCTTTCCGTGGACTGCAGGAATTCGATTTTTATGGCAAAA
GAATGCGAGTACAATATGCGAAAACAAGATCTGACTGTCTTGCAACCGAAGATGGTTCTA
CTGCTCCAAAAGAGAAAAGAAAGAAGCAAGAGGAGAAAGCAGCGGAGAAAAAACGACGAG
CTGAAGAGGCGCAACAATCTGGTCCTAATGCTGCTGCCCAAAGCAATGGGACTGGTTATC
AAGCCTCACGCCTGGGCAAGACTTCGCAAGAGCCACCTGCACCTCCAAACAATATCCTTT
TCATCCAGAACTTACCAGCTGAGACTACAAGCATGATGCTCCAGATCCTGTTCCAGCAGT
ACCCTGGTTTCAGGGAAGTCCGGATGATCGAAGCCAAGCCAGGCATTGCTTTTGTGGAAT
ACGAGGACGACAGCCAGTCTATGGTTGCAATGCAAGCTCTGCAGGGTTTCAAGATCACCC
CATACAACCCAATGGCTATATCCTACGCAAAGAAGTGAATGATCCATGGGATCCCACAAT
CTGGCAAGAAAACCTCTGTACTTGTAAGACTTTCCGCCCTTAGCTTTCAAACTGCTGTAT
CAGTTTTCTAACACTGTATTTTTGGAAAGCAATTGCTTAGTTTAGAAGTCTTTGTTGCTT
AAATCATATTTGGTCTTC