Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0298300-02
CDS Infomation

cds chromosome:IRGSP-1.0:3:10457009:10459575:1 gene:Os03g0298300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0497, trans-membrane plant domain containing protein. (Os03t0298300-01);Uncharacterised protein family UPF0497, trans-membrane plant domain containing protein. (Os03t0298300-02)
Sequence

ATGGCGATGGTCCCCGCCGACGCCGACGCCGCCGCCAAGCCGCCGCCGGACGTGGAGAAG
CCGGACTACAGCTCCCAGAACGGCGCCCCCAACTCGGCCGCCGCCGCCGCCGGGGGGGGC
GGCGGCGGCGTGGTGGATTCGGTGGTGGCGCGGTGGCGGCGGGAGGACATGCTCGACAAG
AGCCCCCTCGCGCTGCACGCGGCCGCCGCGGCGTTCGCCTTCGTCGCGCTCGTGCTCGTC
GCCTCCAACCAGCACGGGGACTGGATGGAGTTCGACCGGTACCAGGAGTACAGGTATCTG
CTCGCGATTGCGGCACTGGCGTTCGCCTACTCGCTCGCGCAGGCGCTGCGGCATGCTCTC
CGGATGCGCCGCGGCGTCGACCCCGTCCCGACGGCGTCCGGGCGGCTCCTCGATTTCGCC
AGTGATCAGGTAGTCGCATACTTGCTGATGTCTGCTCTCTCTGCTGCTACACCCATTACA
AATCGGATGAGATCTGCAGTAATCAACCGCTTCACCGACACGACTGCTGCTGCAATCAGC
ATGGCCTTCTTGGCATTTGTATCCCTCGCCTTGTCAGCGATAGTTTCTGGATACAAACTC
TCCAAACAAACCTACATGTGA

Peptide Sequence

PEP ID

Os03t0298300-02
PEP Infomation

pep chromosome:IRGSP-1.0:3:10457009:10459575:1 gene:Os03g0298300 transcript:Os03t0298300-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0497, trans-membrane plant domain containing protein. (Os03t0298300-01);Uncharacterised protein family UPF0497, trans-membrane plant domain containing protein. (Os03t0298300-02)
Sequence

MAMVPADADAAAKPPPDVEKPDYSSQNGAPNSAAAAAGGGGGGVVDSVVARWRREDMLDK
SPLALHAAAAAFAFVALVLVASNQHGDWMEFDRYQEYRYLLAIAALAFAYSLAQALRHAL
RMRRGVDPVPTASGRLLDFASDQVVAYLLMSALSAATPITNRMRSAVINRFTDTTAAAIS
MAFLAFVSLALSAIVSGYKLSKQTYM

Transcript Sequence

Transcript ID

Os03t0298300-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:10457009:10459575:1 gene:Os03g0298300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0497, trans-membrane plant domain containing protein. (Os03t0298300-01);Uncharacterised protein family UPF0497, trans-membrane plant domain containing protein. (Os03t0298300-02)
Sequence

ACACAAAGCACCTCGCTTACGGTTTTTAGCACCCACACACACTCCCGGCCAACATCTCAC
CACCCCCGAGAGAGAAGGCCGCGCGCCGCGCGCTGCTAGTAGTGCTCGATGGCGATGGTC
CCCGCCGACGCCGACGCCGCCGCCAAGCCGCCGCCGGACGTGGAGAAGCCGGACTACAGC
TCCCAGAACGGCGCCCCCAACTCGGCCGCCGCCGCCGCCGGGGGGGGCGGCGGCGGCGTG
GTGGATTCGGTGGTGGCGCGGTGGCGGCGGGAGGACATGCTCGACAAGAGCCCCCTCGCG
CTGCACGCGGCCGCCGCGGCGTTCGCCTTCGTCGCGCTCGTGCTCGTCGCCTCCAACCAG
CACGGGGACTGGATGGAGTTCGACCGGTACCAGGAGTACAGGTATCTGCTCGCGATTGCG
GCACTGGCGTTCGCCTACTCGCTCGCGCAGGCGCTGCGGCATGCTCTCCGGATGCGCCGC
GGCGTCGACCCCGTCCCGACGGCGTCCGGGCGGCTCCTCGATTTCGCCAGTGATCAGGTA
GTCGCATACTTGCTGATGTCTGCTCTCTCTGCTGCTACACCCATTACAAATCGGATGAGA
TCTGCAGTAATCAACCGCTTCACCGACACGACTGCTGCTGCAATCAGCATGGCCTTCTTG
GCATTTGTATCCCTCGCCTTGTCAGCGATAGTTTCTGGATACAAACTCTCCAAACAAACC
TACATGTGAAGCATCGTTCTATAGGAGTAAAGCCCATTTCATGTGATCCATTCATCCTGG
AGATGCAAGAACTTATGATGACATGAAGGCGTAGTGGTGATTGCTGTTACCTATTGGTAG
CTTACACATGTGTACATAAGCTTAGATGCAACATGCCTGAAGCTCTGAAGACCGCAATAT
TTGTTTAAAATTTGTGCTACCCTTTGACTACCAGAACAACATTTCTGCGGTGATGAGAAG
GTGAGAACTGCTTGTTCTGAAGATACAGATAAGTGTACCTATGTGAGCATTTATTGTAGC
ATCTTTTGTATGTGAGACTGTTATCATTTTATTGTAGCGTCTAAGTTCAATTTGTGTACT
AAATTTTTAGCGTGAGGAATTTATGGGCTAGATTTGTCATTTCT