Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0297900-00
CDS Infomation	cds chromosome:IRGSP-1.0:3:10443193:10445991:1 gene:Os03g0297900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LACCASE 12 description:Similar to laccase 90c. (Os03t0297900-00)
Sequence	ATGGCGACGACGACGAGAGGGCCGGTGACAATGAGGCTCTGCTTCTTCTCTGCCGCTGCT CTTTTCCTTCTCTGCTTCCTCGTCCCGGCCGCCGTCGCCGAGGAGCGCTTCTACGAGTTC GTGGTCCAGGAGACGCTAGTGAAGAGGCTGTGCAATACGCAGAAGATCATCACGGTGAAC GGGCAGTTCCCCGGGCCGACGATCGAGGTGTACGACGGCGACACGGTGGCGATCAGGGCC GTGAACATGGCGAGGTACAACGTGACGCTGCACTGGCACGGCCTCCGCCAGCTGCGGAAC GGGTGGGCGGACGGCCCGGAGTTCGTGACGCAGTGCCCCATCCGCCCAGGCGGCAGCTAC ACCTACCGCTTCGCCATCCAGGGGCAGGAGGGCACCCTGTGGTGGCACGCGCACAGCTCG TGGCTCCGCGCCACCGTCCACGGCGCCCTCCTCATCCGCCCTCGCCCCGGCGTCCCCTAC CCTTTCCCCAAGCCCCACTCCGAGTTCCCCATCATACTAGCGGAGTGGTGGAGGAGGGAC CCGATCGCGGTGCTGAGGCAGTCCATGATCACCGGCGCGCCGCCGAACGTGTCCGACGCG ATCCTCATCAATGGCCAGCCGGGGGATTTCCTTGAGTGCTCCGCCCAAGAGACGAGCATC ATCCCGGTGGCCGCCGGCGAGACGACCCTGCTGCGCATCATCAACGCGGCCATGAACACC GAGCTCTTCGTCTCCCTCGCCGGCCACAAGATGACCGTGGTCGCCGCCGACGCCATGTAC ACCAAGCCGTTCGAGACCACCGTCGTCCTCCTCGGCCCCGGCCAGACCACCGACGTCCTC GTCACCGCCCACGCCGCCCCGGGGCGCTACTACCTCGCCGCCCGCGCCTACGCCTCCGCA CAGGGCGTCCCCTTCGACAACACCACCGCCACCGCCATCTTCCAGTACAAGGGCGGCGCC GGCTGCCCCACTACAGCCGGCGGCGCAGGTGCCGCCGGCGCCGTTGCTGGCGCTGGCGTA GGCGCAGGAGCTGCCGTACTCCGGCGGCAACCCTGGGCGAGCCGGGCCGGCGCCAATGCT GCCGTACCTGCCGGCGTACAACGACACGAACACGGCCACGGCGTTCTCGAACAGCATCCG GAGCCCGGCGCCGGTGAAGGTGCCCGGGCCGGTGACCCAGGAGGTGTTCACCACGGTGGG GTTCGGCCTCTTCAACTGCATGCCCGGCCCGTTCTGCCAGGGACCCAACAACACCCGGTT CGGCGCGAGCATGAACAACGTGTCGTTCCAGCTCCCCAACACCGTCTCCCTCCTGCAGGC GCACTACCACCACATCCCCGGCGTGTTCACCGACGACTTCCCGCCGATGCCACCCGTGTT CTTCGACTTCACCTCCCAGAACGTCCCCCGCGCGCTGTGGCAGCCGGTGAAGGGCACCAA GCTGTACCGCGTCAGGTACGGCGCGGTGGTGCAGATCGTCTTCCAGGACACCGGCATCTT CGCCGCCGAGGAGCATCCCATGCACATCCACGGCTACCACTTCTACGTGCTCGCCACGGG GTTCGGCAACTACGACCCGGTGAGGGACGCCCACAAGTTCAACCTCGTCGACCCGCCCAG CCGGAACACCATCGGCGTGCCCGTCGGCGGGTGGGCCGTCGTGCGGTTCGTGGCGGACAA CCCCGGGGTGTGGCTGGTGCACTGCCACATCGACGCGCATCTCACCGGCGGGCTGGGCAT GGCGCTGCTGGTGGAGGACGGCGAGGCGGAGCTGGAGGCCACCATGGCGCCGCCGCTGGA CCTGCCGTTGTGCGCCCTGTAGAGAAGAACTTTTCGTTTCTTTGGGTTTGTGTAGTTGTG TACGTACGTACGTGGTGGCGATTTGAGGAGGGCTGTGTGCATTGTACGTGTCGATGGTAC ACCCTGTGTGTTTGCGTTTAG

Peptide Sequence

PEP ID	Os03t0297900-00
PEP Infomation	pep chromosome:IRGSP-1.0:3:10443193:10445991:1 gene:Os03g0297900 transcript:Os03t0297900-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LACCASE 12 description:Similar to laccase 90c. (Os03t0297900-00)
Sequence	MATTTRGPVTMRLCFFSAAALFLLCFLVPAAVAEERFYEFVVQETLVKRLCNTQKIITVN GQFPGPTIEVYDGDTVAIRAVNMARYNVTLHWHGLRQLRNGWADGPEFVTQCPIRPGGSY TYRFAIQGQEGTLWWHAHSSWLRATVHGALLIRPRPGVPYPFPKPHSEFPIILAEWWRRD PIAVLRQSMITGAPPNVSDAILINGQPGDFLECSAQETSIIPVAAGETTLLRIINAAMNT ELFVSLAGHKMTVVAADAMYTKPFETTVVLLGPGQTTDVLVTAHAAPGRYYLAARAYASA QGVPFDNTTATAIFQYKGGAGCPTTAGGAGAAGAVAGAGVGAGAAVLRRQPWASRAGANA AVPAGVQRHEHGHGVLEQHPEPGAGEGARAGDPGGVHHGGVRPLQLHARPVLPGTQQHPV RREHEQRVVPAPQHRLPPAGALPPHPRRVHRRLPADATRVLRLHLPERPPRAVAAGEGHQ AVPRQVRRGGADRLPGHRHLRRRGASHAHPRLPLLRARHGVRQLRPGEGRPQVQPRRPAQ PEHHRRARRRVGRRAVRGGQPRGVAGALPHRRASHRRAGHGAAGGGRRGGAGGHHGAAAG PAVVRPVEKNFSFLWVCVVVYVRTWWRFEEGCVHCTCRWYTLCVCV

Transcript Sequence

Transcript ID	Os03t0297900-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:10443193:10445991:1 gene:Os03g0297900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LACCASE 12 description:Similar to laccase 90c. (Os03t0297900-00)
Sequence	CCAGCCTGCAACCAAAGCATCGGAGAGCAATGGCGACGACGACGAGAGGGCCGGTGACAA TGAGGCTCTGCTTCTTCTCTGCCGCTGCTCTTTTCCTTCTCTGCTTCCTCGTCCCGGCCG CCGTCGCCGAGGAGCGCTTCTACGAGTTCGTGGTCCAGGAGACGCTAGTGAAGAGGCTGT GCAATACGCAGAAGATCATCACGGTGAACGGGCAGTTCCCCGGGCCGACGATCGAGGTGT ACGACGGCGACACGGTGGCGATCAGGGCCGTGAACATGGCGAGGTACAACGTGACGCTGC ACTGGCACGGCCTCCGCCAGCTGCGGAACGGGTGGGCGGACGGCCCGGAGTTCGTGACGC AGTGCCCCATCCGCCCAGGCGGCAGCTACACCTACCGCTTCGCCATCCAGGGGCAGGAGG GCACCCTGTGGTGGCACGCGCACAGCTCGTGGCTCCGCGCCACCGTCCACGGCGCCCTCC TCATCCGCCCTCGCCCCGGCGTCCCCTACCCTTTCCCCAAGCCCCACTCCGAGTTCCCCA TCATACTAGCGGAGTGGTGGAGGAGGGACCCGATCGCGGTGCTGAGGCAGTCCATGATCA CCGGCGCGCCGCCGAACGTGTCCGACGCGATCCTCATCAATGGCCAGCCGGGGGATTTCC TTGAGTGCTCCGCCCAAGAGACGAGCATCATCCCGGTGGCCGCCGGCGAGACGACCCTGC TGCGCATCATCAACGCGGCCATGAACACCGAGCTCTTCGTCTCCCTCGCCGGCCACAAGA TGACCGTGGTCGCCGCCGACGCCATGTACACCAAGCCGTTCGAGACCACCGTCGTCCTCC TCGGCCCCGGCCAGACCACCGACGTCCTCGTCACCGCCCACGCCGCCCCGGGGCGCTACT ACCTCGCCGCCCGCGCCTACGCCTCCGCACAGGGCGTCCCCTTCGACAACACCACCGCCA CCGCCATCTTCCAGTACAAGGGCGGCGCCGGCTGCCCCACTACAGCCGGCGGCGCAGGTG CCGCCGGCGCCGTTGCTGGCGCTGGCGTAGGCGCAGGAGCTGCCGTACTCCGGCGGCAAC CCTGGGCGAGCCGGGCCGGCGCCAATGCTGCCGTACCTGCCGGCGTACAACGACACGAAC ACGGCCACGGCGTTCTCGAACAGCATCCGGAGCCCGGCGCCGGTGAAGGTGCCCGGGCCG GTGACCCAGGAGGTGTTCACCACGGTGGGGTTCGGCCTCTTCAACTGCATGCCCGGCCCG TTCTGCCAGGGACCCAACAACACCCGGTTCGGCGCGAGCATGAACAACGTGTCGTTCCAG CTCCCCAACACCGTCTCCCTCCTGCAGGCGCACTACCACCACATCCCCGGCGTGTTCACC GACGACTTCCCGCCGATGCCACCCGTGTTCTTCGACTTCACCTCCCAGAACGTCCCCCGC GCGCTGTGGCAGCCGGTGAAGGGCACCAAGCTGTACCGCGTCAGGTACGGCGCGGTGGTG CAGATCGTCTTCCAGGACACCGGCATCTTCGCCGCCGAGGAGCATCCCATGCACATCCAC GGCTACCACTTCTACGTGCTCGCCACGGGGTTCGGCAACTACGACCCGGTGAGGGACGCC CACAAGTTCAACCTCGTCGACCCGCCCAGCCGGAACACCATCGGCGTGCCCGTCGGCGGG TGGGCCGTCGTGCGGTTCGTGGCGGACAACCCCGGGGTGTGGCTGGTGCACTGCCACATC GACGCGCATCTCACCGGCGGGCTGGGCATGGCGCTGCTGGTGGAGGACGGCGAGGCGGAG CTGGAGGCCACCATGGCGCCGCCGCTGGACCTGCCGTTGTGCGCCCTGTAGAGAAGAACT TTTCGTTTCTTTGGGTTTGTGTAGTTGTGTACGTACGTACGTGGTGGCGATTTGAGGAGG GCTGTGTGCATTGTACGTGTCGATGGTACACCCTGTGTGTTTGCGTTTAGAATTTGGCAT ATTGTATTTTGGATTTCGATTTG