Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0297700-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:10428927:10433729:1 gene:Os03g0297700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os03t0297700-01)
Sequence	CTAAAAACGTACAGTAGCCTCCCGGCCCACTCTGAGATGCTCCGTCGTCTGCTTCCGAGC CGCCACCACTGCGTCCTCCTGCAAACCCTACCGCCGGCGGCCACCGCCGCAAGGGAAATA CTGCGACGGCGGCAGTGCTCTTCGGTGGTGTCCTCGAGCCCGAGCCTCTCGATATGGAGG CGGAAGAAGGAGATGGGGAAGGAAGGCCTGATGGTGGTCGGGCAGCTGAAGCGGCTTGCG GCGCTGCCCCCGGCCGGTGGAAGCCCACGGTTGGAGCAGTTCATGCGCTCGCATGTTTCA CGGCTCCTCCGCAACGACCTCCTCGCTGTACTCGCCGAGCTGCTCCGCCAGGACCACGTC CTCCTCTCCATGAAGATATATAGCGTCGTGCGGAAAGAAATATGGTACCGCCCTGATATG TACTTCTACCGGGACATGCTGTATATGCTAGCTAGGAACAAGAAGATTGAGGAGACAAGG CAGGTCTGGGCAGATCTTAAGTCTGAAGACGTGTTATTTGATCAGCACACCTATGGTGAC ATCGTTAGAGCCTTCTGTGATGCCGGCTTGATTGATCTGGCAATGGAATTTTACGAAGAC ATGAGAAGCTCTCCAGATCCACCCCTCTCATTGCCGTTCCGGGTTATACTTAAAGGCCTG GTTCCATATCCTGACCTAAGGGAGAAGATAAAGCAAGATTTTCTAGAACTCTTCCCTGAT ATGATTGTATATGACCCTCCAGATAGCCTGTCAGATGTGGACGATGAATTCAAATTTTGA

Peptide Sequence

PEP ID	Os03t0297700-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:10428927:10433729:1 gene:Os03g0297700 transcript:Os03t0297700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os03t0297700-01)
Sequence	LKTYSSLPAHSEMLRRLLPSRHHCVLLQTLPPAATAAREILRRRQCSSVVSSSPSLSIWR RKKEMGKEGLMVVGQLKRLAALPPAGGSPRLEQFMRSHVSRLLRNDLLAVLAELLRQDHV LLSMKIYSVVRKEIWYRPDMYFYRDMLYMLARNKKIEETRQVWADLKSEDVLFDQHTYGD IVRAFCDAGLIDLAMEFYEDMRSSPDPPLSLPFRVILKGLVPYPDLREKIKQDFLELFPD MIVYDPPDSLSDVDDEFKF

Transcript Sequence

Transcript ID	Os03t0297700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:10428927:10433729:1 gene:Os03g0297700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os03t0297700-01)
Sequence	GAGATTCCAGGTCTCCAGCCGGCGCCGCCACCCTCGCGTCCTCGCCCCGCGCGCGGCGCG CGTCGCCGGCGTCTCCCACCTGCCCGGCTGCCCTGCCCCATCCTCGTCAAGCCCTCCTCC GCTGCGGCCGTCAACGTGGTCGTCGTCTCCGCGGCCGCCGCGGGCGGCGGAGGGGGCGCG GCCGCGCGGGGGGAGGAGGAGGAGGGGTCGGGGTGGTGGTCGGGCCCCGTCGTCCCGCCG GCGGCAAGCGTCCACGAGCTGCTCGAGTGCCCCGTCTGCACGAACTCCATGTACCCGCCC ATCCACCAGGTTTTTCACATTTAAGCTAAGTACTTGGAAATAGGCGAAACAGACGCCATC AAGAAGGTATTGCAGGACCACTCCCTCTGGGTCGATAGCAAGGTTGTGAAGGCCAAAATC TAGGACAAAACTGACTAAAAACGTACAGTAGCCTCCCGGCCCACTCTGAGATGCTCCGTC GTCTGCTTCCGAGCCGCCACCACTGCGTCCTCCTGCAAACCCTACCGCCGGCGGCCACCG CCGCAAGGGAAATACTGCGACGGCGGCAGTGCTCTTCGGTGGTGTCCTCGAGCCCGAGCC TCTCGATATGGAGGCGGAAGAAGGAGATGGGGAAGGAAGGCCTGATGGTGGTCGGGCAGC TGAAGCGGCTTGCGGCGCTGCCCCCGGCCGGTGGAAGCCCACGGTTGGAGCAGTTCATGC GCTCGCATGTTTCACGGCTCCTCCGCAACGACCTCCTCGCTGTACTCGCCGAGCTGCTCC GCCAGGACCACGTCCTCCTCTCCATGAAGATATATAGCGTCGTGCGGAAAGAAATATGGT ACCGCCCTGATATGTACTTCTACCGGGACATGCTGTATATGCTAGCTAGGAACAAGAAGA TTGAGGAGACAAGGCAGGTCTGGGCAGATCTTAAGTCTGAAGACGTGTTATTTGATCAGC ACACCTATGGTGACATCGTTAGAGCCTTCTGTGATGCCGGCTTGATTGATCTGGCAATGG AATTTTACGAAGACATGAGAAGCTCTCCAGATCCACCCCTCTCATTGCCGTTCCGGGTTA TACTTAAAGGCCTGGTTCCATATCCTGACCTAAGGGAGAAGATAAAGCAAGATTTTCTAG AACTCTTCCCTGATATGATTGTATATGACCCTCCAGATAGCCTGTCAGATGTGGACGATG AATTCAAATTTTGATCAGTTACACATCCCTACCTTCATTTCTGAGGTCTTTCTGGTAATA CCATGAAAAGGTACACACGAAGTTCAATTTCTCAGCTAATGCTTTGCTCTCTGCATTGTG CACTAGCCG