Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0297400-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:10400794:10404233:-1 gene:Os03g0297400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Acyl transferase domain containing protein. (Os03t0297400-01)
Sequence

ATGCTCCGCTGCCCGCCTCCTCGCCGCCTCTGCCTCCGCCTCGGCTCGCCGGTGTCTACG
ATGGCCTCCACGCTCGCCTTCCTCAGGCCCTCCGCGCCGGCCCCGCTCGCAGCCTCGCGC
GGCGCCGCGAGGGGCGTCCCCGCGGCCGTGAGGGTGCCGTGCAGATCTAGGGTCTCGGCG
GCCGGCGTGTCCCTCGGATCGGAGGTGGCGGTGGGCTCCGACGCGCTCTTCGCCGACTAC
AAGCCCACCACCGCATTCCTCTTCCCCGGCCAGGGTGCTCAGACTGTTGGGATGGGTGCA
GAAGCAGTGAATGTTCCTGCAGCTGCCAAACTATTTGATAAGGCAAATGATATACTTGGG
TATGACTTGTTGGATTTTTGCACCAATGGACCAAAAGAAAAGCTTGACTCGACAGTAATC
AGTCAGCCAGCTATATATGTCACCAGCCTTGCAGCCGTAGAGGTACTACGCTCACGTGAT
GGAGGCCAAAATGTAATTGACTCTGTAGATGTCACATGCGGTCTCAGCTTAGGGGAATAC
ACTGCACTTGCATTTGCTGGTGCCTTTAGCTTTGAGGATGGTCTGAAGCTTGTCAAGCTT
AGAGGAGAAGCCATGCAGGATGCTTCAGATGCTGCCAGCAGTGCTATGGTCAGTGTGATT
GGTCTAGATTCAGAGAAGGTGCAGCAATTATGCGATGCTGCTAACGAGGAAGTAGATGAA
AAGGAAAGAGTTCAAATAGCAAACTTTCTGTGTCCTGGGAACTATGCAGTTTCTGGTGGT
GTGAAGGGGATTGAAGCAGTCGAAGCCAAAGCAAAGTCCTTTAAGGCCAGAATGACGGTG
CGCCTAGCTGTTGCTGGTGCTTTCCATACAAGCTTCATGCAACCTGCTGTTTCAAGATTG
GAATCTGCATTAGCTGAGACAGAGATAAAAACACCAAGAATCCCAGTTATCTCCAATGTG
GATGCATCACCCCACTCAGATCCTGACACAATCAAGAAGATTTTGGCGCGACAGGTAACT
TCCCCTGTGCAATGGGAGAGTACCGTGAAGACTCTGATGGGTAAAGGACTTGAGAAAAGC
TATGAACTTGGTCCTGGAAAGGTTATAGCAGGAATTCTTAAAAGGATTGACAAAGGCGCA
AGCATTGAGAACATTGGTGCATGA

Peptide Sequence

PEP ID

Os03t0297400-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:10400794:10404233:-1 gene:Os03g0297400 transcript:Os03t0297400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Acyl transferase domain containing protein. (Os03t0297400-01)
Sequence

MLRCPPPRRLCLRLGSPVSTMASTLAFLRPSAPAPLAASRGAARGVPAAVRVPCRSRVSA
AGVSLGSEVAVGSDALFADYKPTTAFLFPGQGAQTVGMGAEAVNVPAAAKLFDKANDILG
YDLLDFCTNGPKEKLDSTVISQPAIYVTSLAAVEVLRSRDGGQNVIDSVDVTCGLSLGEY
TALAFAGAFSFEDGLKLVKLRGEAMQDASDAASSAMVSVIGLDSEKVQQLCDAANEEVDE
KERVQIANFLCPGNYAVSGGVKGIEAVEAKAKSFKARMTVRLAVAGAFHTSFMQPAVSRL
ESALAETEIKTPRIPVISNVDASPHSDPDTIKKILARQVTSPVQWESTVKTLMGKGLEKS
YELGPGKVIAGILKRIDKGASIENIGA

Transcript Sequence

Transcript ID

Os03t0297400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:10400794:10404233:-1 gene:Os03g0297400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Acyl transferase domain containing protein. (Os03t0297400-01)
Sequence

ACCTCGCTGCTGCTCCGCCAGCTAGTAGCCGCCATCCTCCACGCCTACAAAGCTCGCGGC
CCCGCAGGTGCATGCTCCGCTGCCCGCCTCCTCGCCGCCTCTGCCTCCGCCTCGGCTCGC
CGGTGTCTACGATGGCCTCCACGCTCGCCTTCCTCAGGCCCTCCGCGCCGGCCCCGCTCG
CAGCCTCGCGCGGCGCCGCGAGGGGCGTCCCCGCGGCCGTGAGGGTGCCGTGCAGATCTA
GGGTCTCGGCGGCCGGCGTGTCCCTCGGATCGGAGGTGGCGGTGGGCTCCGACGCGCTCT
TCGCCGACTACAAGCCCACCACCGCATTCCTCTTCCCCGGCCAGGGTGCTCAGACTGTTG
GGATGGGTGCAGAAGCAGTGAATGTTCCTGCAGCTGCCAAACTATTTGATAAGGCAAATG
ATATACTTGGGTATGACTTGTTGGATTTTTGCACCAATGGACCAAAAGAAAAGCTTGACT
CGACAGTAATCAGTCAGCCAGCTATATATGTCACCAGCCTTGCAGCCGTAGAGGTACTAC
GCTCACGTGATGGAGGCCAAAATGTAATTGACTCTGTAGATGTCACATGCGGTCTCAGCT
TAGGGGAATACACTGCACTTGCATTTGCTGGTGCCTTTAGCTTTGAGGATGGTCTGAAGC
TTGTCAAGCTTAGAGGAGAAGCCATGCAGGATGCTTCAGATGCTGCCAGCAGTGCTATGG
TCAGTGTGATTGGTCTAGATTCAGAGAAGGTGCAGCAATTATGCGATGCTGCTAACGAGG
AAGTAGATGAAAAGGAAAGAGTTCAAATAGCAAACTTTCTGTGTCCTGGGAACTATGCAG
TTTCTGGTGGTGTGAAGGGGATTGAAGCAGTCGAAGCCAAAGCAAAGTCCTTTAAGGCCA
GAATGACGGTGCGCCTAGCTGTTGCTGGTGCTTTCCATACAAGCTTCATGCAACCTGCTG
TTTCAAGATTGGAATCTGCATTAGCTGAGACAGAGATAAAAACACCAAGAATCCCAGTTA
TCTCCAATGTGGATGCATCACCCCACTCAGATCCTGACACAATCAAGAAGATTTTGGCGC
GACAGGTAACTTCCCCTGTGCAATGGGAGAGTACCGTGAAGACTCTGATGGGTAAAGGAC
TTGAGAAAAGCTATGAACTTGGTCCTGGAAAGGTTATAGCAGGAATTCTTAAAAGGATTG
ACAAAGGCGCAAGCATTGAGAACATTGGTGCATGAGTTTGGAGGTATCAAGAGTCAAAGA
CTATAGGGATAATAAGGTTAGGGAGAGCCTGCAAATTCAAGCAGTACTCCGAATGTATCA
AATGTTAGCCAACATGGCTGTTGTGGCAAACTGGCAATTGCCGTCTGAGGAAACGATATT
GATTACTGTTGAGGCCCATAATTTGGAGACTTTTGTGGTTTATTTACAGCCTGCTGTTCA
GATTTAACCAAGATATGAACGTGTGAATGTGTGATAACTCATGATAG