Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0297100-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:10393657:10395829:1 gene:Os03g0297100 gene_biotype:protein_coding transcript_biotype:protein_coding description:40S ribosomal protein S7. (Os03t0297100-01)
Sequence

ATGTACACCGCGAGGAAGAAGATCCAGAAGGAGAAGGGCCTCGAGCCCTCCGAGTTCGAG
GACTCCGTCGCGCAGGCTTTCTTTGACCTCGAGAATGGCAACCAGGAGCTCAAGAGCGAG
CTCAAGGACCTGTACATCAACAATGCAGTCCAGATGGATATTGCCGGGAACAGGAAGGCT
GTGGTGATCCACGTGCCGTACCGTCTGCGCAAGGCATTCAAGAAAATCCATGTCAGGCTT
GTCAGGGAGCTCGAGAAGAAGTTCAGCGGCAAGGATGTGGTAATTGTTGCAACAAGGAGG
ATTGTGAGGCCTCCCAAGAAGGGCTCGGCTGTTCAGCGCCCTCGCACAAGAACTCTTACT
GCTGTTCATGATGGTATCTTGGAGGATGTAGTCTACCCAGCTGAGATTGTTGGCAAGCGC
ATCAGATACCGTCTGGATGGTGCCAAGGTCATCAAGATTTTCTTGGACCCAAAGGAGCGC
AACAATACCGAATACAAGCTCGAGACCTTCTCCGCGGTCTACCGCAGGCTTTGTGGGAAA
GATGTTGCCTTTGAGTACCCTATGACTGAAACTGCTTGA

Peptide Sequence

PEP ID

Os03t0297100-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:10393657:10395829:1 gene:Os03g0297100 transcript:Os03t0297100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:40S ribosomal protein S7. (Os03t0297100-01)
Sequence

MYTARKKIQKEKGLEPSEFEDSVAQAFFDLENGNQELKSELKDLYINNAVQMDIAGNRKA
VVIHVPYRLRKAFKKIHVRLVRELEKKFSGKDVVIVATRRIVRPPKKGSAVQRPRTRTLT
AVHDGILEDVVYPAEIVGKRIRYRLDGAKVIKIFLDPKERNNTEYKLETFSAVYRRLCGK
DVAFEYPMTETA

Transcript Sequence

Transcript ID

Os03t0297100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:10393657:10395829:1 gene:Os03g0297100 gene_biotype:protein_coding transcript_biotype:protein_coding description:40S ribosomal protein S7. (Os03t0297100-01)
Sequence

TCCGAACCCTAGCGCCGGCGCCGCCACTTCCCTCTCGCATCTTCTCGCGCTCAGGGGCCA
GGTAAGCGAAGATGTACACCGCGAGGAAGAAGATCCAGAAGGAGAAGGGCCTCGAGCCCT
CCGAGTTCGAGGACTCCGTCGCGCAGGCTTTCTTTGACCTCGAGAATGGCAACCAGGAGC
TCAAGAGCGAGCTCAAGGACCTGTACATCAACAATGCAGTCCAGATGGATATTGCCGGGA
ACAGGAAGGCTGTGGTGATCCACGTGCCGTACCGTCTGCGCAAGGCATTCAAGAAAATCC
ATGTCAGGCTTGTCAGGGAGCTCGAGAAGAAGTTCAGCGGCAAGGATGTGGTAATTGTTG
CAACAAGGAGGATTGTGAGGCCTCCCAAGAAGGGCTCGGCTGTTCAGCGCCCTCGCACAA
GAACTCTTACTGCTGTTCATGATGGTATCTTGGAGGATGTAGTCTACCCAGCTGAGATTG
TTGGCAAGCGCATCAGATACCGTCTGGATGGTGCCAAGGTCATCAAGATTTTCTTGGACC
CAAAGGAGCGCAACAATACCGAATACAAGCTCGAGACCTTCTCCGCGGTCTACCGCAGGC
TTTGTGGGAAAGATGTTGCCTTTGAGTACCCTATGACTGAAACTGCTTGAAGATGCATTC
CTTGGATTGTTCCCAATGTATTCCAGAAATCATAGTTTTGATGCCAAAGTTGGTACTTGG
GTATTTGTTACTTTGAGACGACAAATCGACTTGAACAATGTTAAAGTTTTGGGCATTTAA
ATTATAGACCTTTGCTTTGGCACGGTTAGCTTGTTTCAATCCATTGTTTGTTGTGGAATT
AGTTTTCACTTATGTGGTAGGGGAAGAATCTCATTATGACCGCCTATTTCATTTTTTTTG
CTCCAGCTACTCGTTATCTGTTACCTTAGTCATTTAATCGTTGTTTTGTTGGGCCTCCTG
CTTGC