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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0295500-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:10325025:10330450:1 gene:Os03g0295500 gene_biotype:protein_coding transcript_biotype:protein_coding description:CHCH domain containing protein. (Os03t0295500-01)
Sequence

ATGTCGGCGAGCAGCGCGCCGGTGGACGCATCGGGGGATCCGATCCCGACCTCGTCGGTG
CTGATGGCGGCGTCGAAGCACATCGCCGTGCGGTGCAGGCCGGAGAACGTGGCCTTCCTC
AACTGCAAGAAGAAGGACCCCAACCCGCAGAAGTGCCTCGAGAAGGGCCGCCAGGTCAAG
CGCTGCGTCTTCGACCTGTTGAAAGAACTTCACCAGAAGTGCCCCAAGGAGATGGACGCC
TATGCCGGCTGCATGTATTACTACACCAACGAATTTGACTTCTGTCGTAAGGAGCAGCAA
GATTTTGAGAGTGCATGCCCCGTATCTGAGTAG

Peptide Sequence

PEP ID

Os03t0295500-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:10325025:10330450:1 gene:Os03g0295500 transcript:Os03t0295500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:CHCH domain containing protein. (Os03t0295500-01)
Sequence

MSASSAPVDASGDPIPTSSVLMAASKHIAVRCRPENVAFLNCKKKDPNPQKCLEKGRQVK
RCVFDLLKELHQKCPKEMDAYAGCMYYYTNEFDFCRKEQQDFESACPVSE

Transcript Sequence

Transcript ID

Os03t0295500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:10325025:10330450:1 gene:Os03g0295500 gene_biotype:protein_coding transcript_biotype:protein_coding description:CHCH domain containing protein. (Os03t0295500-01)
Sequence

AGATCTCCAAGGCGAGAAGCCCTCGAGGCCCGCCGCGCCGCACGCAGGGATGTCGGCGAG
CAGCGCGCCGGTGGACGCATCGGGGGATCCGATCCCGACCTCGTCGGTGCTGATGGCGGC
GTCGAAGCACATCGCCGTGCGGTGCAGGCCGGAGAACGTGGCCTTCCTCAACTGCAAGAA
GAAGGACCCCAACCCGCAGAAGTGCCTCGAGAAGGGCCGCCAGGTCAAGCGCTGCGTCTT
CGACCTGTTGAAAGAACTTCACCAGAAGTGCCCCAAGGAGATGGACGCCTATGCCGGCTG
CATGTATTACTACACCAACGAATTTGACTTCTGTCGTAAGGAGCAGCAAGATTTTGAGAG
TGCATGCCCCGTATCTGAGTAGCCTCTCAGGGTTTTACTTCAAATGAATGATCTTCACAA
ATAAGGAGAAAAAGCCGACAAACCAAGTTCATGATCTCCCATGTTTGTTGTTGTCCTCAC
AGAATTTTTCTTTTCGGATGACTAGCACGCCTCTGAGCTTTTCATCCTGCTTGTCATTAT
TCTCATGCAAGATTTTCTCACCAATCAACAACACTGTTTGAGTTGGATGGCAATCTTGTT
GTCTTGAGTCAGCTGTAGCCCTAAGATAAGTTGATCGATGATGTTACTCTTATGATTTGC
AACGTTTC