Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0294900-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:10298971:10305409:-1 gene:Os03g0294900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Ubiquitin-activating enzyme E1. (Os03t0294900-01)
Sequence

CATCCAAGCCGAAGGGAAGGGAAGGGAAGAGGCAAGGCACAACCATCCACAGGGTGGCGG
CGCCGCGCGGAGCGAATCCCTAGCCGCCACCTTCCGATCGCCCGCATCCGGATCGGTCTC
CGTTCTTCGATCCGTACTCTGCTCCGATCGCCATTTCCTGGTGGTCCGTCGCGCTATATG
CTTCCGACGAAGAGAGCGAACGGCGCTGAGGCTGAGAGCAGCAGCGACGCGCCGGCGAAG
AAGGCGCGGGTAGGGGCATCGGCGTCGGAGGCGGAGGCGATGGTGGCTGGGGAGGCGGGC
GGCGGTGGGGGTGGGGTGAGCGGCAATGGGAGCGAGGTGGCGGAGATCGACGAGGACCTG
CACAGCAGGCAGCTCGCCGTGTACGGGAGGGAGACGATGCGGCGGCTCTTCGCGTCCAAC
GTCCTCGTCTCCGGACTGAACGGGCTTGGGGCTGAGATTGCGAAGAATCTTGCTTTAGCG
GGTGTTAAGTCTATCACCCTACATGATATGGGAAATGTGGAAATGTGGGACTTATCAGGC
AATTTCTTCCTATCTGAAGATGATATTGGAAAGAATAGGGCTGTTGCTTGCACTGCAAAG
CTGCAAGAACTCAACAATGCTGTTCTTATATCTACTCTGACAGAAGATCTGACCAATGAA
CACCTCTCAAAGTTTCAGGCTGTTGTTTTCACTGACATAAGTCTAGACAAGGCGTTTGAA
TTTGATGATTATTGTCGTAACCACCAGCCTTCAATTTCTTTTATCAAAGCAGAAGTTTGT
GGTCTTTTTGGTAGTGTATTTTGTGACTTTGGGCCTAAGTTTACCGTTCTGGATGTTGAT
GGTGAAGAACCACATACTGGTATAATTGCATCCATCAGCAATGACAATCCTGCAATGATA
TCCTGCGTTGATGATGAGCGCCTTGAATTCCAAGATGGTGATCTTGTTGTCTTCTCAGAG
GTCCAAGGGATGACAGAACTAAATGATGGCAAGCCAAGGAAGATAATAAATGCAAGGCCA
TATTCATTTTGCATCCAGGAGGATACAAGTAAATTTGGTATTTATGCAAAAGGTGGAATT
GTTACTCAGGTGAAAGAGCCGATCAACTTAGAGTTCAAGAGTCTCAGAGATTCTATAAGA
GAACCAGGGAATTTCCTTTTGAGCGATTTCTCAAAGTTTGACCGTCCTCCTCTTCTGCAC
TTCGCATTTCTAGCTTTGGATAAGTTCAGGAAAGAATTTGGGCGCTTTCCTGGTGCTGGC
TGTGACCAAGATGCTCAAAGGTTTATTGAGTTTGTTGCTTCTGTCAATGAAGCTACAATT
GATTACAAGATGGATGAGCTTGATGGGAAGTTGTTACGAAATTTTGCAAGTGGTTCTAGA
GCTGTTCTAAACCCAATGGCTGCGATGTTTGGTGGCATTGTCGGCCAAGAAGTTGTTAAG
GCATGCTCTGGGAAATTTCATCCTCAATACCAGTTCTTTTATTTTGATTCAGCGGAATCT
CTACCAACCTATCCATTGGACTCAAAAGACTTGAAACCATTGAATAGCCGCTATGATGCT
CAGATATCTGTTTTTGGTTCTAAGCTTCAGAAAAAGATGAGAGATGCCAATGTTTTTGTT
GTGGGATCTGGTGCTCTTGGGTGTGAATTCTTGAAGAATCTTGCTTTAATGGGAGTATCT
TGTGGCCTTAAAGGAAAGCTAACTATAACAGATGATGATATCATTGAGAAAAGCAACTTG
AGCCGCCAATTTCTGTTTCGTGATTGGAATATTGGGCAGGCTAAATCTACTGTAGCAGCT
GCAGCGGCTAGTGCTATCAACTCCAGCCTGCATATTAATGCTCTTCAGAATCGTGCCTGT
CCAGAGACTGAGCATGTGTTCCATGACAAATTCTGGGAGGGCCTTGATGTCATCATCAAT
GCACTTGATAATGTTAATGCTAGGATGTACATGGATATGAGATGCTTGTACTTCCAGAAA
CCACTTTTGGAATCTGGAACATTGGGTCCAAAATGCAATACACAAATGGTAATTCCTCAC
CTTACTGAAAACTATGGAGCATCCCGAGACCCTCCTGAGAAACAGGCACCAATGTGCACA
GTCCACTCTTTCCCACACAATATTGACCACTGTCTGACATGGGCTCGTTCAGAGTTTGAG
GGTTTGCTAGAGAAAACTCCAAATGAAGTGAACTCTTTTATTTCCAATCCAGCTCAATAT
GCTGCTGCTATGAGAAAGGCAGGTGATGCTCAAGCAAGGGAATTGCTCGAGCGTGTTTGT
GAATGCCTTGACAAGGAGCGATGTGATGGATTTGAAGATTGCATTGCCTGGGCTAGACTG
AAATTTGAAGACTACTTCGCTAATCGTGTGAAGCAGCTAACATTCACATTTCCTGAAGAT
GCGGTCACTAGCACGGGTGCTTTTTTCTGGTCTGCCCCCAAACGGTTTCCTCGCCCACTG
CAATTCTCTACTGTGAATTCATCTCACATTCACTTCATACTGGCTGCTTCCATATTGAGA
GCAGTGTCATTCGGGATCTCCATACCCGACTGGGCAAAGAACACAAGTAATCTGGTCGAT
GCTGTTAGTAAGGTTGTAGTGCCTGAATTTGAACCGAAGAGTGGGGTTAAGATTGAGACA
GATGAGAAAGCTTCTAACATCTCTAGTGCTTCTGTTGATGATGCTTCTGTTATTGAAGAT
CTTTTAACCAAGCTGGAAGCATCTGCAAAAAAATTACCTCCTGGATTCCAGATGAAGGCT
ATTCAGTTTGAGAAGGATGATGACACAAACTTCCACATGGATTTAATTGCTGGGCTTGCA
AATATGCGTGCAAGGAACTATGGTATTCAAGAGGTCGACAAGCTGAAGGCGAAGTTCATT
GCAGGAAGAATCATTCCGGCGATCGCAACTTCGACAGCCATGGCAACAGGACTTGTGTGC
CTTGAGCTTTACAAGGTTCTGGCTGGTGGGCACCCCGTCGAAGACTACCGCAATTCGTTT
GCTAACTTGGCAATACCAATGTTCTCCATGGCTGAACCTCTTCCACCCAAGGTGATCAAG
CATCAAGACATGAGATGGACCATATGGGATCGGTGGTCTATCGAGGGCAACATCACTGTC
GCAGAACTCCTCAAGTGGCTGAGTGACAAGGGCCTGAGCGCGTACAGTGTCTCCTGCGGC
ACTTCATTGCTTTACAACACCATGTTTCCGAGACACAAGGATCGAGTGAACAAGAAGCTC
GTGGATGTCGCCAAGGAGGTGGCGAAGGTGGACGTTCCGGCATACAGGAGGCACCTGGAT
GTCGTCGTTGCCTGTGAAGATGATGATGGGAATGACGTCGACATCCCTCTCATCTCCATT
TACTTCCGGTAG

Peptide Sequence

PEP ID

Os03t0294900-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:10298971:10305409:-1 gene:Os03g0294900 transcript:Os03t0294900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Ubiquitin-activating enzyme E1. (Os03t0294900-01)
Sequence

HPSRREGKGRGKAQPSTGWRRRAERIPSRHLPIARIRIGLRSSIRTLLRSPFPGGPSRYM
LPTKRANGAEAESSSDAPAKKARVGASASEAEAMVAGEAGGGGGGVSGNGSEVAEIDEDL
HSRQLAVYGRETMRRLFASNVLVSGLNGLGAEIAKNLALAGVKSITLHDMGNVEMWDLSG
NFFLSEDDIGKNRAVACTAKLQELNNAVLISTLTEDLTNEHLSKFQAVVFTDISLDKAFE
FDDYCRNHQPSISFIKAEVCGLFGSVFCDFGPKFTVLDVDGEEPHTGIIASISNDNPAMI
SCVDDERLEFQDGDLVVFSEVQGMTELNDGKPRKIINARPYSFCIQEDTSKFGIYAKGGI
VTQVKEPINLEFKSLRDSIREPGNFLLSDFSKFDRPPLLHFAFLALDKFRKEFGRFPGAG
CDQDAQRFIEFVASVNEATIDYKMDELDGKLLRNFASGSRAVLNPMAAMFGGIVGQEVVK
ACSGKFHPQYQFFYFDSAESLPTYPLDSKDLKPLNSRYDAQISVFGSKLQKKMRDANVFV
VGSGALGCEFLKNLALMGVSCGLKGKLTITDDDIIEKSNLSRQFLFRDWNIGQAKSTVAA
AAASAINSSLHINALQNRACPETEHVFHDKFWEGLDVIINALDNVNARMYMDMRCLYFQK
PLLESGTLGPKCNTQMVIPHLTENYGASRDPPEKQAPMCTVHSFPHNIDHCLTWARSEFE
GLLEKTPNEVNSFISNPAQYAAAMRKAGDAQARELLERVCECLDKERCDGFEDCIAWARL
KFEDYFANRVKQLTFTFPEDAVTSTGAFFWSAPKRFPRPLQFSTVNSSHIHFILAASILR
AVSFGISIPDWAKNTSNLVDAVSKVVVPEFEPKSGVKIETDEKASNISSASVDDASVIED
LLTKLEASAKKLPPGFQMKAIQFEKDDDTNFHMDLIAGLANMRARNYGIQEVDKLKAKFI
AGRIIPAIATSTAMATGLVCLELYKVLAGGHPVEDYRNSFANLAIPMFSMAEPLPPKVIK
HQDMRWTIWDRWSIEGNITVAELLKWLSDKGLSAYSVSCGTSLLYNTMFPRHKDRVNKKL
VDVAKEVAKVDVPAYRRHLDVVVACEDDDGNDVDIPLISIYFR

Transcript Sequence

Transcript ID

Os03t0294900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:10298971:10305409:-1 gene:Os03g0294900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Ubiquitin-activating enzyme E1. (Os03t0294900-01)
Sequence

TATATACTCTTCTCCGCCGGCATAGCATCCAAGCCGAAGGGAAGGGAAGGGAAGAGGCAA
GGCACAACCATCCACAGGGTGGCGGCGCCGCGCGGAGCGAATCCCTAGCCGCCACCTTCC
GATCGCCCGCATCCGGATCGGTCTCCGTTCTTCGATCCGTACTCTGCTCCGATCGCCATT
TCCTGGTGGTCCGTCGCGCTATATGCTTCCGACGAAGAGAGCGAACGGCGCTGAGGCTGA
GAGCAGCAGCGACGCGCCGGCGAAGAAGGCGCGGGTAGGGGCATCGGCGTCGGAGGCGGA
GGCGATGGTGGCTGGGGAGGCGGGCGGCGGTGGGGGTGGGGTGAGCGGCAATGGGAGCGA
GGTGGCGGAGATCGACGAGGACCTGCACAGCAGGCAGCTCGCCGTGTACGGGAGGGAGAC
GATGCGGCGGCTCTTCGCGTCCAACGTCCTCGTCTCCGGACTGAACGGGCTTGGGGCTGA
GATTGCGAAGAATCTTGCTTTAGCGGGTGTTAAGTCTATCACCCTACATGATATGGGAAA
TGTGGAAATGTGGGACTTATCAGGCAATTTCTTCCTATCTGAAGATGATATTGGAAAGAA
TAGGGCTGTTGCTTGCACTGCAAAGCTGCAAGAACTCAACAATGCTGTTCTTATATCTAC
TCTGACAGAAGATCTGACCAATGAACACCTCTCAAAGTTTCAGGCTGTTGTTTTCACTGA
CATAAGTCTAGACAAGGCGTTTGAATTTGATGATTATTGTCGTAACCACCAGCCTTCAAT
TTCTTTTATCAAAGCAGAAGTTTGTGGTCTTTTTGGTAGTGTATTTTGTGACTTTGGGCC
TAAGTTTACCGTTCTGGATGTTGATGGTGAAGAACCACATACTGGTATAATTGCATCCAT
CAGCAATGACAATCCTGCAATGATATCCTGCGTTGATGATGAGCGCCTTGAATTCCAAGA
TGGTGATCTTGTTGTCTTCTCAGAGGTCCAAGGGATGACAGAACTAAATGATGGCAAGCC
AAGGAAGATAATAAATGCAAGGCCATATTCATTTTGCATCCAGGAGGATACAAGTAAATT
TGGTATTTATGCAAAAGGTGGAATTGTTACTCAGGTGAAAGAGCCGATCAACTTAGAGTT
CAAGAGTCTCAGAGATTCTATAAGAGAACCAGGGAATTTCCTTTTGAGCGATTTCTCAAA
GTTTGACCGTCCTCCTCTTCTGCACTTCGCATTTCTAGCTTTGGATAAGTTCAGGAAAGA
ATTTGGGCGCTTTCCTGGTGCTGGCTGTGACCAAGATGCTCAAAGGTTTATTGAGTTTGT
TGCTTCTGTCAATGAAGCTACAATTGATTACAAGATGGATGAGCTTGATGGGAAGTTGTT
ACGAAATTTTGCAAGTGGTTCTAGAGCTGTTCTAAACCCAATGGCTGCGATGTTTGGTGG
CATTGTCGGCCAAGAAGTTGTTAAGGCATGCTCTGGGAAATTTCATCCTCAATACCAGTT
CTTTTATTTTGATTCAGCGGAATCTCTACCAACCTATCCATTGGACTCAAAAGACTTGAA
ACCATTGAATAGCCGCTATGATGCTCAGATATCTGTTTTTGGTTCTAAGCTTCAGAAAAA
GATGAGAGATGCCAATGTTTTTGTTGTGGGATCTGGTGCTCTTGGGTGTGAATTCTTGAA
GAATCTTGCTTTAATGGGAGTATCTTGTGGCCTTAAAGGAAAGCTAACTATAACAGATGA
TGATATCATTGAGAAAAGCAACTTGAGCCGCCAATTTCTGTTTCGTGATTGGAATATTGG
GCAGGCTAAATCTACTGTAGCAGCTGCAGCGGCTAGTGCTATCAACTCCAGCCTGCATAT
TAATGCTCTTCAGAATCGTGCCTGTCCAGAGACTGAGCATGTGTTCCATGACAAATTCTG
GGAGGGCCTTGATGTCATCATCAATGCACTTGATAATGTTAATGCTAGGATGTACATGGA
TATGAGATGCTTGTACTTCCAGAAACCACTTTTGGAATCTGGAACATTGGGTCCAAAATG
CAATACACAAATGGTAATTCCTCACCTTACTGAAAACTATGGAGCATCCCGAGACCCTCC
TGAGAAACAGGCACCAATGTGCACAGTCCACTCTTTCCCACACAATATTGACCACTGTCT
GACATGGGCTCGTTCAGAGTTTGAGGGTTTGCTAGAGAAAACTCCAAATGAAGTGAACTC
TTTTATTTCCAATCCAGCTCAATATGCTGCTGCTATGAGAAAGGCAGGTGATGCTCAAGC
AAGGGAATTGCTCGAGCGTGTTTGTGAATGCCTTGACAAGGAGCGATGTGATGGATTTGA
AGATTGCATTGCCTGGGCTAGACTGAAATTTGAAGACTACTTCGCTAATCGTGTGAAGCA
GCTAACATTCACATTTCCTGAAGATGCGGTCACTAGCACGGGTGCTTTTTTCTGGTCTGC
CCCCAAACGGTTTCCTCGCCCACTGCAATTCTCTACTGTGAATTCATCTCACATTCACTT
CATACTGGCTGCTTCCATATTGAGAGCAGTGTCATTCGGGATCTCCATACCCGACTGGGC
AAAGAACACAAGTAATCTGGTCGATGCTGTTAGTAAGGTTGTAGTGCCTGAATTTGAACC
GAAGAGTGGGGTTAAGATTGAGACAGATGAGAAAGCTTCTAACATCTCTAGTGCTTCTGT
TGATGATGCTTCTGTTATTGAAGATCTTTTAACCAAGCTGGAAGCATCTGCAAAAAAATT
ACCTCCTGGATTCCAGATGAAGGCTATTCAGTTTGAGAAGGATGATGACACAAACTTCCA
CATGGATTTAATTGCTGGGCTTGCAAATATGCGTGCAAGGAACTATGGTATTCAAGAGGT
CGACAAGCTGAAGGCGAAGTTCATTGCAGGAAGAATCATTCCGGCGATCGCAACTTCGAC
AGCCATGGCAACAGGACTTGTGTGCCTTGAGCTTTACAAGGTTCTGGCTGGTGGGCACCC
CGTCGAAGACTACCGCAATTCGTTTGCTAACTTGGCAATACCAATGTTCTCCATGGCTGA
ACCTCTTCCACCCAAGGTGATCAAGCATCAAGACATGAGATGGACCATATGGGATCGGTG
GTCTATCGAGGGCAACATCACTGTCGCAGAACTCCTCAAGTGGCTGAGTGACAAGGGCCT
GAGCGCGTACAGTGTCTCCTGCGGCACTTCATTGCTTTACAACACCATGTTTCCGAGACA
CAAGGATCGAGTGAACAAGAAGCTCGTGGATGTCGCCAAGGAGGTGGCGAAGGTGGACGT
TCCGGCATACAGGAGGCACCTGGATGTCGTCGTTGCCTGTGAAGATGATGATGGGAATGA
CGTCGACATCCCTCTCATCTCCATTTACTTCCGGTAGGTAGGATCATTCCTGTAAAAAAA
AAGAGGTGAAAATAGATTGAGCATTCGTAAGTCTCTTCGTCAGTTCGCTCTTTCTATGCA
TTATTTAGTAGCCAGTGATCGCCGCAGTGTGTTGGTTGCTCGTGGCGATTCTCCTTGCCG
TTTTATGTGGGTGTTCTCCCTTTGCTGTTGCATGCCGACTATTTGCAGGTGTGCAATGCG
GCCCCATCTCATGGATGTTTTGTTGACTGAATGCATAATATCTGCAATTGGATTGAGGTG
TTTCCCACTTTTTGAGTCCC