Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0293000-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:10206161:10208503:1 gene:Os03g0293000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ER-resident J-protein 3A, THERMOSENSITIVE MALE STERILE 1 description:Similar to DnaJ domain containing protein, expressed. (Os03t0293000-01)
Sequence	AAAAATTATGATCTCTATGGAGATGAAAAGGGTAACCCAGGATTTGGTGGTGGAAATTTT GGAAATCGTGAGGGCTACACATACTTCACTGGTGGTGGCGCCAAGACTAGCCATTTCTCA TCTGGTGATGGATGGCAAACGATGGGCGGCCAGGGAAATACAAAAACATTTTCCTTTTCA TTTGGTGGTGGTAACCCTGGTGCCGGTGGAGGAAACCCATTTAACTTTGATTTTGGTGAT GTTTTTTCCAACATATTTTCTGGTGGATCAATGGGAGGTAGTCAGCATACTGGATCTGCT GGCAAAGCCAGACGTGGTACAAAATCTTCTGGTCATGATTCTAGTTCTGTCAACATTCAG GAGGTCACGATGCAAATTTTCAATAAAGAAACAGCTGATCAAGGAATCACTTGGCTTTTG TTATTCTATACACCAAACACAAAAGGTCAATTTGTGCTAGAAAGTGTCGTGGAGGATGTA GCTCGTTCACTGGATGGTGCACTGAGGGCTGGTAAGGTAAACTGCGACCATGAAAAGGCA CTTTGCAAGAAGGCTGGTGTCTCAATAGGAAAATCAGCTCGTCTCTTCATTTATTCATAC ACAACTACAGAAAAAGGGTCTTTGCATGAGTACTCAGGAGATTATGATTCTAAGAGCCTG AAGACATTTTGTCAAGAACACCTGCCAAGATTTTCCAAAAGGGTAGACATCAACCAATTC AGCTTCCCCTCAAATATCATACCAAACCTTCCTCAAGTGCTCCTACTGTCAGCTAAGAAG GACACACCAGCAATGTGGCGTGCTGTTAGTGGGATGTTCCGCAGTCGATTAATTTTCTAT GATGCAGAGGTCCAGGATGTTTCTCATCCACTCCTCAAAAGCCTTGGTGTGAAGAATATT CCAGCTCTAATTGGTAGGTCCGTTAATGGTGAGGAACAACTTCTGAAGGATGGCATTTCA GTGAAAGATCTCAGATCTGGTATCAAAGAATTGAAGAATCTGCTCGAAAATTTTGAGAAG AAGAATAAGAAGCTTGCATCAAACCAAGCTAAGAAACCTGCTCACACAGATCAACCAAAA GAAAACAAAATTCCTCTCCTCACTGCTTCCAACTTTGAGGAGATTTGTGGTGAGAAGACA TCAGTATGTATCCTTGGCATTTTCAAATCAAGCAAAGCTAAGGAAAATCTTGAAGCCGTC CTGTCTGAGATATCTCAGAAGACTCTGATAAGGGGGCAGAACTACAACTCTGGGAACGCA GTTGCTTATGCTTTGTTGGACGGGAACAAACAGTCCGCCTTCCTGTCCACGTTTGACAAA TCAGCATTCAAGTCGTCTGATAAACTTCTCCTTGCCTACAAGCCCCGACGGGGTAGATAT GCTGTGTATGACAATGAGGTGACTATGGAAGAGGCTGAAAGGTTCGTGGTTTCTGTTTTG AATGGAGATGTTCAATTGTCTGCAGCCGGACGAAAACCAGTTCTTAGGTAG

Peptide Sequence

PEP ID	Os03t0293000-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:10206161:10208503:1 gene:Os03g0293000 transcript:Os03t0293000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ER-resident J-protein 3A, THERMOSENSITIVE MALE STERILE 1 description:Similar to DnaJ domain containing protein, expressed. (Os03t0293000-01)
Sequence	KNYDLYGDEKGNPGFGGGNFGNREGYTYFTGGGAKTSHFSSGDGWQTMGGQGNTKTFSFS FGGGNPGAGGGNPFNFDFGDVFSNIFSGGSMGGSQHTGSAGKARRGTKSSGHDSSSVNIQ EVTMQIFNKETADQGITWLLLFYTPNTKGQFVLESVVEDVARSLDGALRAGKVNCDHEKA LCKKAGVSIGKSARLFIYSYTTTEKGSLHEYSGDYDSKSLKTFCQEHLPRFSKRVDINQF SFPSNIIPNLPQVLLLSAKKDTPAMWRAVSGMFRSRLIFYDAEVQDVSHPLLKSLGVKNI PALIGRSVNGEEQLLKDGISVKDLRSGIKELKNLLENFEKKNKKLASNQAKKPAHTDQPK ENKIPLLTASNFEEICGEKTSVCILGIFKSSKAKENLEAVLSEISQKTLIRGQNYNSGNA VAYALLDGNKQSAFLSTFDKSAFKSSDKLLLAYKPRRGRYAVYDNEVTMEEAERFVVSVL NGDVQLSAAGRKPVLR

Transcript Sequence

Transcript ID	Os03t0293000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:10206161:10208503:1 gene:Os03g0293000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ER-resident J-protein 3A, THERMOSENSITIVE MALE STERILE 1 description:Similar to DnaJ domain containing protein, expressed. (Os03t0293000-01)
Sequence	AAAAATTATGATCTCTATGGAGATGAAAAGGGTAACCCAGGATTTGGTGGTGGAAATTTT GGAAATCGTGAGGGCTACACATACTTCACTGGTGGTGGCGCCAAGACTAGCCATTTCTCA TCTGGTGATGGATGGCAAACGATGGGCGGCCAGGGAAATACAAAAACATTTTCCTTTTCA TTTGGTGGTGGTAACCCTGGTGCCGGTGGAGGAAACCCATTTAACTTTGATTTTGGTGAT GTTTTTTCCAACATATTTTCTGGTGGATCAATGGGAGGTAGTCAGCATACTGGATCTGCT GGCAAAGCCAGACGTGGTACAAAATCTTCTGGTCATGATTCTAGTTCTGTCAACATTCAG GAGGTCACGATGCAAATTTTCAATAAAGAAACAGCTGATCAAGGAATCACTTGGCTTTTG TTATTCTATACACCAAACACAAAAGGTCAATTTGTGCTAGAAAGTGTCGTGGAGGATGTA GCTCGTTCACTGGATGGTGCACTGAGGGCTGGTAAGGTAAACTGCGACCATGAAAAGGCA CTTTGCAAGAAGGCTGGTGTCTCAATAGGAAAATCAGCTCGTCTCTTCATTTATTCATAC ACAACTACAGAAAAAGGGTCTTTGCATGAGTACTCAGGAGATTATGATTCTAAGAGCCTG AAGACATTTTGTCAAGAACACCTGCCAAGATTTTCCAAAAGGGTAGACATCAACCAATTC AGCTTCCCCTCAAATATCATACCAAACCTTCCTCAAGTGCTCCTACTGTCAGCTAAGAAG GACACACCAGCAATGTGGCGTGCTGTTAGTGGGATGTTCCGCAGTCGATTAATTTTCTAT GATGCAGAGGTCCAGGATGTTTCTCATCCACTCCTCAAAAGCCTTGGTGTGAAGAATATT CCAGCTCTAATTGGTAGGTCCGTTAATGGTGAGGAACAACTTCTGAAGGATGGCATTTCA GTGAAAGATCTCAGATCTGGTATCAAAGAATTGAAGAATCTGCTCGAAAATTTTGAGAAG AAGAATAAGAAGCTTGCATCAAACCAAGCTAAGAAACCTGCTCACACAGATCAACCAAAA GAAAACAAAATTCCTCTCCTCACTGCTTCCAACTTTGAGGAGATTTGTGGTGAGAAGACA TCAGTATGTATCCTTGGCATTTTCAAATCAAGCAAAGCTAAGGAAAATCTTGAAGCCGTC CTGTCTGAGATATCTCAGAAGACTCTGATAAGGGGGCAGAACTACAACTCTGGGAACGCA GTTGCTTATGCTTTGTTGGACGGGAACAAACAGTCCGCCTTCCTGTCCACGTTTGACAAA TCAGCATTCAAGTCGTCTGATAAACTTCTCCTTGCCTACAAGCCCCGACGGGGTAGATAT GCTGTGTATGACAATGAGGTGACTATGGAAGAGGCTGAAAGGTTCGTGGTTTCTGTTTTG AATGGAGATGTTCAATTGTCTGCAGCCGGACGAAAACCAGTTCTTAGGTAGAGCCGTAGA GGCTATCTCTGCAATTGCAAACCTTGTTTTCTTGGGAACGATTGCAAGTAAAGTGTATAT ATATAGTTCTTATAGTGTAGTACCTCCTTAAGGAGGTAACTTGGGAACGTTTTCTGCTTG TACATAGCTGAATCTGATTGGAATGAAGAGAGTAAAATATTCTGCAGTCGGCACTTTTGT TGTGTCATGAACTGGAATACCCTGACATGGGGCAGTCGGCACTTTTGTTGTGTCATGAAC TGGAATACCCTGACATGGGAGAGATCACTCCCCCTGTAACATGAGCTGTTTTGATGTCAA AGAACTCAAATCTGGAT