Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0291500-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:10120289:10124384:-1 gene:Os03g0291500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ASPARAGINE SYNTHETASE 1 description:Asparagine synthetase, Biosynthesis of asparagine following the supply of ammonium (Os03t0291500-01)
Sequence	ATGTGCGGGATCCTGGCCGTGCTCGGCGCCGCCGACTGGTCGCAGGCGAAGAGGGCTCAC GTCCTCTCCTGCTCCCGCAGGCTGAAGCACAGGGGACCCGACTGGTCCGGGTTGTACCAG TGCGAGGGAAACTTCCTCGCTCAGCAGCGTCTCGCCATCGTCTCCCCGCTCTCCGGCGAC CAGCCGCTGTACAACGCGGACCGGACCATCGTCGTCGTGGCCAATGGAGAGATCTACAAC CACAAGAAGATCAGGAAGCAGTTCGCCTCCAAGCACACGTTCAGCACCGGCAGCGACTGC GAGGTCATCATCCCGCTGTATGAGGAGTACGGCGAGGACTTCGTCGACATGCTGGACGGC GTGTTCGCCTTCGTCCTCTACGACACCCGCACCAAGACGTACATGGCCGCCCGCGACGCC ATCGGCGTCAACCCCCTCTACATCGGCAGGGGCAGCGACGGCGCCGTCTGGATATCGTCC GAGATGAAGGCGCTGAACGAGGACTGCGTGGAGTTCGAGATCTTCCCTCCGGGCCACCTC TACTCCAGCGCCGCCGGCGGGCTCCGGCGGTGGTACAAGCCGCAGTGGTTCGCCGAGAAC GTCCCGGCGACGCCGTACCAGCCACTCCTCCTCAGAGAGGCCTTCGAGAAGGCCGTCATC AAGAGGCTCATGACCGACGTGCCCTTCGGCGTCCTCCTCTCCGGCGGCCTCGACTCCTCC CTCGTCGCCGCGGTGACCAAGCGCCACCTCATCAAGACTGAAGCCGCCGAGAAGTTCGGA GCTGAGCTCCATTCCTTCGTCGTTGGCCTTGAGGGTTCCCCTGACCTGATAGCTGCACGA GAGGTCGCTGACCACCTAGGAACCATCCATCACGAGTTCCACTTCACTGTCCAGGATGGC ATCGACGCGATCGAGGAGGTCATCTACCACGACGAGACGTACGACGTGACGACGATACGG GCCAGCACGCCGATGTTCCTGATGGCGCGCAAGATCAAGGCGCTCGGGGTTAAGATGGTG CTGTCCGGTGAAGGCTCCGACGAGCTCCTCGGCGGTTACCTCTACTTCCACTTCGCCCCC AACAAGGAAGAGTTCCACAAGGAGACCTGCCGCAAGGTGAAAGCACTTCATCAGTATGAC TGTCTGCGTGCTAACAAGGCGACGTCTGCCTGGGGACTGGAGGTCCGTGTGCCGTTCCTC GACAAGGAGTTCATCAACGTCGCCATGAGCATGGACCCTGAGTGGAAGATGTACAATGCT GATCTTGGTCGCATCGAGAAGTGGGTTATGAGGAAGGCGTTCGACGACGAGGAGCATCCT TACCTGCCGAAGCACATACTGTACAGGCAGAAAGAGCAGTTCAGTGATGGCGTCGGCTAC AACTGGATCGATGGCCTGAAGGCTTTCACCGAGCAGCAGGTCAGTGATGAAATGATGAAG AACGCTGCCAAAGTGTACCCGCACAACACGCCCGTCAACAAGGAGGCGTACTACTACCGC ATGATATTTGAGAGGCTCTTCCCGCAGGAATCGGCGAGGGAGACGGTGCCGTGGGGCCCG AGCATCGCGTGCAGCACGCCGGCGGCGATCGAGTGGGTGGAGCAGTGGAAGGCGTCGCAC GACCCATCCGGCCGGCTGATCGCCTCCCACAACTCCGCCTCCGCCTCCGCCAACCACACC AACCACGCAAACGCCAACGCCAACGGCAACAGCAACGGCAAGGCCAACGGCAACTGCGCG ATGGCGGCCAACGGGACGAACGGCGTCGGCCTGGTTGTGGCCAACGGGACAGCCAACGGG AAGATGGAAGCATAA

Peptide Sequence

PEP ID	Os03t0291500-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:10120289:10124384:-1 gene:Os03g0291500 transcript:Os03t0291500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ASPARAGINE SYNTHETASE 1 description:Asparagine synthetase, Biosynthesis of asparagine following the supply of ammonium (Os03t0291500-01)
Sequence	MCGILAVLGAADWSQAKRAHVLSCSRRLKHRGPDWSGLYQCEGNFLAQQRLAIVSPLSGD QPLYNADRTIVVVANGEIYNHKKIRKQFASKHTFSTGSDCEVIIPLYEEYGEDFVDMLDG VFAFVLYDTRTKTYMAARDAIGVNPLYIGRGSDGAVWISSEMKALNEDCVEFEIFPPGHL YSSAAGGLRRWYKPQWFAENVPATPYQPLLLREAFEKAVIKRLMTDVPFGVLLSGGLDSS LVAAVTKRHLIKTEAAEKFGAELHSFVVGLEGSPDLIAAREVADHLGTIHHEFHFTVQDG IDAIEEVIYHDETYDVTTIRASTPMFLMARKIKALGVKMVLSGEGSDELLGGYLYFHFAP NKEEFHKETCRKVKALHQYDCLRANKATSAWGLEVRVPFLDKEFINVAMSMDPEWKMYNA DLGRIEKWVMRKAFDDEEHPYLPKHILYRQKEQFSDGVGYNWIDGLKAFTEQQVSDEMMK NAAKVYPHNTPVNKEAYYYRMIFERLFPQESARETVPWGPSIACSTPAAIEWVEQWKASH DPSGRLIASHNSASASANHTNHANANANGNSNGKANGNCAMAANGTNGVGLVVANGTANG KMEA

Transcript Sequence

Transcript ID	Os03t0291500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:10120289:10124384:-1 gene:Os03g0291500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ASPARAGINE SYNTHETASE 1 description:Asparagine synthetase, Biosynthesis of asparagine following the supply of ammonium (Os03t0291500-01)
Sequence	ACAGCATCACACTCCCCACCCATACGCATCCATCCACCGTCTCAATCTCGGTAGTAATCC TCGCGGCCTCGCCGTTAGTTCCACCACCGGGCGCCACCATGTGCGGGATCCTGGCCGTGC TCGGCGCCGCCGACTGGTCGCAGGCGAAGAGGGCTCACGTCCTCTCCTGCTCCCGCAGGC TGAAGCACAGGGGACCCGACTGGTCCGGGTTGTACCAGTGCGAGGGAAACTTCCTCGCTC AGCAGCGTCTCGCCATCGTCTCCCCGCTCTCCGGCGACCAGCCGCTGTACAACGCGGACC GGACCATCGTCGTCGTGGCCAATGGAGAGATCTACAACCACAAGAAGATCAGGAAGCAGT TCGCCTCCAAGCACACGTTCAGCACCGGCAGCGACTGCGAGGTCATCATCCCGCTGTATG AGGAGTACGGCGAGGACTTCGTCGACATGCTGGACGGCGTGTTCGCCTTCGTCCTCTACG ACACCCGCACCAAGACGTACATGGCCGCCCGCGACGCCATCGGCGTCAACCCCCTCTACA TCGGCAGGGGCAGCGACGGCGCCGTCTGGATATCGTCCGAGATGAAGGCGCTGAACGAGG ACTGCGTGGAGTTCGAGATCTTCCCTCCGGGCCACCTCTACTCCAGCGCCGCCGGCGGGC TCCGGCGGTGGTACAAGCCGCAGTGGTTCGCCGAGAACGTCCCGGCGACGCCGTACCAGC CACTCCTCCTCAGAGAGGCCTTCGAGAAGGCCGTCATCAAGAGGCTCATGACCGACGTGC CCTTCGGCGTCCTCCTCTCCGGCGGCCTCGACTCCTCCCTCGTCGCCGCGGTGACCAAGC GCCACCTCATCAAGACTGAAGCCGCCGAGAAGTTCGGAGCTGAGCTCCATTCCTTCGTCG TTGGCCTTGAGGGTTCCCCTGACCTGATAGCTGCACGAGAGGTCGCTGACCACCTAGGAA CCATCCATCACGAGTTCCACTTCACTGTCCAGGATGGCATCGACGCGATCGAGGAGGTCA TCTACCACGACGAGACGTACGACGTGACGACGATACGGGCCAGCACGCCGATGTTCCTGA TGGCGCGCAAGATCAAGGCGCTCGGGGTTAAGATGGTGCTGTCCGGTGAAGGCTCCGACG AGCTCCTCGGCGGTTACCTCTACTTCCACTTCGCCCCCAACAAGGAAGAGTTCCACAAGG AGACCTGCCGCAAGGTGAAAGCACTTCATCAGTATGACTGTCTGCGTGCTAACAAGGCGA CGTCTGCCTGGGGACTGGAGGTCCGTGTGCCGTTCCTCGACAAGGAGTTCATCAACGTCG CCATGAGCATGGACCCTGAGTGGAAGATGTACAATGCTGATCTTGGTCGCATCGAGAAGT GGGTTATGAGGAAGGCGTTCGACGACGAGGAGCATCCTTACCTGCCGAAGCACATACTGT ACAGGCAGAAAGAGCAGTTCAGTGATGGCGTCGGCTACAACTGGATCGATGGCCTGAAGG CTTTCACCGAGCAGCAGGTCAGTGATGAAATGATGAAGAACGCTGCCAAAGTGTACCCGC ACAACACGCCCGTCAACAAGGAGGCGTACTACTACCGCATGATATTTGAGAGGCTCTTCC CGCAGGAATCGGCGAGGGAGACGGTGCCGTGGGGCCCGAGCATCGCGTGCAGCACGCCGG CGGCGATCGAGTGGGTGGAGCAGTGGAAGGCGTCGCACGACCCATCCGGCCGGCTGATCG CCTCCCACAACTCCGCCTCCGCCTCCGCCAACCACACCAACCACGCAAACGCCAACGCCA ACGGCAACAGCAACGGCAAGGCCAACGGCAACTGCGCGATGGCGGCCAACGGGACGAACG GCGTCGGCCTGGTTGTGGCCAACGGGACAGCCAACGGGAAGATGGAAGCATAACGCTCGA AGCTGGCCGGCCGGACGGCCATTGATCGCGCTAGCCGATGAGATCGTCGACGGCCGTGTG GTGTACACTAAAAAAGGATAAAGCTAGTACTAGTAGGTGTGCGTGTTTTCTCACCAATCG CCCATGACGTTGGCGCGTTCTGTAGTACTACCCGTGTACGTGCGTGTTTGTTGCCGCTGC TGTTGTACCGTCTCCCCTTGTCGTTGTACGTGTGCGAGAGAGACCGATCCAAGTATGTGG AGAGTGATCGATCACTCATCCGAACTCATCCTTGAAACGATACACCGTAATTAATATATC TCCTCATTTTTCGCTGTC