Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0285700-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:9843336:9846670:1 gene:Os03g0285700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ASCORBATE PEROXIDASE 1 description:Similar to L-ascorbate peroxidase. (Os03t0285700-01)
Sequence

ATGGCTAAGAACTACCCCGTCGTGAGCGCCGAGTACCAGGAGGCCGTCGAGAAGGCCAGG
CAGAAGCTGCGCGCCCTCATCGCCGAGAAGAGCTGCGCCCCTCTCATGCTCCGCCTCGCG
TGGCACTCGGCGGGGACGTTCGACGTGTCGTCGAAGACCGGGGGCCCGTTCGGGACGATG
AAGACCCCGGCGGAGCTGTCGCACGCCGCCAACGCGGGGCTGGACATCGCGGTGCGGATG
CTCGAGCCCATCAAGGAGGAGATACCCACCATCTCCTACGCCGATTTCTACCAGCTTGCC
GGAGTTGTGGCCGTCGAGGTGTCCGGTGGACCTGCCGTCCCCTTCCACCCAGGAAGGGAG
GACAAACCTGCACCCCCACCTGAGGGCCGTCTTCCTGATGCTACCAAGGGTTCTGACCAC
CTAAGGCAGGTCTTCGGTGCGCAGATGGGCTTGAGTGATCAGGACATTGTTGCCCTCTCT
GGCGGTCACACCCTGGGAAGGTGCCACAAGGAAAGATCTGGTTTTGAGGGACCTTGGACA
AGAAACCCTCTGCAGTTTGACAACTCTTACTTCACGGAGCTTCTGAGTGGTGACAAGGAG
GGCCTTCTTCAGCTTCCTAGTGACAAAGCCCTGCTGAGTGACCCTGCCTTCCGCCCACTC
GTCGAGAAATATGCTGCAGATGAGAAGGCTTTCTTTGAAGACTACAAGGAGGCCCACCTC
AAGCTCTCCGAACTGGGGTTCGCTGATGCTTAA

Peptide Sequence

PEP ID

Os03t0285700-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:9843336:9846670:1 gene:Os03g0285700 transcript:Os03t0285700-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ASCORBATE PEROXIDASE 1 description:Similar to L-ascorbate peroxidase. (Os03t0285700-01)
Sequence

MAKNYPVVSAEYQEAVEKARQKLRALIAEKSCAPLMLRLAWHSAGTFDVSSKTGGPFGTM
KTPAELSHAANAGLDIAVRMLEPIKEEIPTISYADFYQLAGVVAVEVSGGPAVPFHPGRE
DKPAPPPEGRLPDATKGSDHLRQVFGAQMGLSDQDIVALSGGHTLGRCHKERSGFEGPWT
RNPLQFDNSYFTELLSGDKEGLLQLPSDKALLSDPAFRPLVEKYAADEKAFFEDYKEAHL
KLSELGFADA

Transcript Sequence

Transcript ID

Os03t0285700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:9843336:9846670:1 gene:Os03g0285700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ASCORBATE PEROXIDASE 1 description:Similar to L-ascorbate peroxidase. (Os03t0285700-01)
Sequence

AAGCCTTTCGAGTCGTCTTCTCCCCTTCTTCTCCTCCTCCTCCTCGATTCGGAGCTCCAC
CCGCAGCCATGGCTAAGAACTACCCCGTCGTGAGCGCCGAGTACCAGGAGGCCGTCGAGA
AGGCCAGGCAGAAGCTGCGCGCCCTCATCGCCGAGAAGAGCTGCGCCCCTCTCATGCTCC
GCCTCGCGTGGCACTCGGCGGGGACGTTCGACGTGTCGTCGAAGACCGGGGGCCCGTTCG
GGACGATGAAGACCCCGGCGGAGCTGTCGCACGCCGCCAACGCGGGGCTGGACATCGCGG
TGCGGATGCTCGAGCCCATCAAGGAGGAGATACCCACCATCTCCTACGCCGATTTCTACC
AGCTTGCCGGAGTTGTGGCCGTCGAGGTGTCCGGTGGACCTGCCGTCCCCTTCCACCCAG
GAAGGGAGGACAAACCTGCACCCCCACCTGAGGGCCGTCTTCCTGATGCTACCAAGGGTT
CTGACCACCTAAGGCAGGTCTTCGGTGCGCAGATGGGCTTGAGTGATCAGGACATTGTTG
CCCTCTCTGGCGGTCACACCCTGGGAAGGTGCCACAAGGAAAGATCTGGTTTTGAGGGAC
CTTGGACAAGAAACCCTCTGCAGTTTGACAACTCTTACTTCACGGAGCTTCTGAGTGGTG
ACAAGGAGGGCCTTCTTCAGCTTCCTAGTGACAAAGCCCTGCTGAGTGACCCTGCCTTCC
GCCCACTCGTCGAGAAATATGCTGCAGATGAGAAGGCTTTCTTTGAAGACTACAAGGAGG
CCCACCTCAAGCTCTCCGAACTGGGGTTCGCTGATGCTTAAGAGGTTTCTAGTCTACTAC
TGCTAGTACATTGCCCGTGGTACTCTTGTTTTGCATCTAGGCTAGGGCCAGTGTGAACCA
GCAGACTACCACTGTGAGTCGCCTCTGTAATAAAATTTGTTCGGCCTATGGCCATCCTCA
GTACGTTGTCAATGTCTCGGTGGGCTGTTATGCTCAACTGCAATGCTGCATCCACTGAAA
CCTCTTTCTAGATGTGTTGGTATGAAATGCGGTATTGCGTTCCCGATTTCCCC