Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0282900-02
CDS Infomation

cds chromosome:IRGSP-1.0:3:9703719:9707167:1 gene:Os03g0282900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os03t0282900-01);Conserved hypothetical protein. (Os03t0282900-02)
Sequence

ATGACGAGGCTCGCGGCAGCCGCGCTCCGGAGGGCCACCGCCGCATCTGGGATCCCCTCG
TCCTCCTCGCGCTCGTCCGTGCTTGCTCCGTTCGCGCCTCGCCTCTTCTCCACCGAGGCG
TCCGGAGAAACCCCCGCGGCGGGCGCCGCCGCCCAGGGGTCGCAGGACGAGCCTTTCTTC
AAGCCTTCTGACGAAGGTGTGGCATATGGAAGGTTCTACAGTGTTATTCCTGGAGGCAGC
CGTCTCCCTAAGAGCATGCTCAAAACTGATATTATCCACCACCTTGATAAATCTGAACTG
TCACTGGACGATGTGAAGATTGATTATAACAGGGGATATTATCCAGTGGGCGCGTTGTTG
AGGTTTTCTTCAGTGCCATTATTTAACACAGCAGTCAGGCAAACACGAGAAGGTCGTCAG
TACAGGCTTGAGATGATCAGTCGTGAGGAGTTTGATCTGAAGCAGTCTTATGATGGAAAA
GCTATACTATTGCAAGGAGTCCCTCGAAATGCTGTACCAGAGGACATAGAACGATTCCTG
TGTGGCACCAATGTTGAACCTCCGCCATTTGAAAGCTTTCTCAGACCTGGTGTCCCAGAT
CCTATCAGAGTGGTGCTGGTTAAATTCCGCTCAAGGACTGATGCCGCCAATGCTTTCATT
ACTAAGAACCGGGGTTTCTGCCTGAACAACCCTGTGAGCATGCGTGTTCTTCAATAG

Peptide Sequence

PEP ID

Os03t0282900-02
PEP Infomation

pep chromosome:IRGSP-1.0:3:9703719:9707167:1 gene:Os03g0282900 transcript:Os03t0282900-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os03t0282900-01);Conserved hypothetical protein. (Os03t0282900-02)
Sequence

MTRLAAAALRRATAASGIPSSSSRSSVLAPFAPRLFSTEASGETPAAGAAAQGSQDEPFF
KPSDEGVAYGRFYSVIPGGSRLPKSMLKTDIIHHLDKSELSLDDVKIDYNRGYYPVGALL
RFSSVPLFNTAVRQTREGRQYRLEMISREEFDLKQSYDGKAILLQGVPRNAVPEDIERFL
CGTNVEPPPFESFLRPGVPDPIRVVLVKFRSRTDAANAFITKNRGFCLNNPVSMRVLQ

Transcript Sequence

Transcript ID

Os03t0282900-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:9703719:9707167:1 gene:Os03g0282900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os03t0282900-01);Conserved hypothetical protein. (Os03t0282900-02)
Sequence

GTTGCTCCGTCGGTCGTGTGTCCCCCAAAGGCTCCAAGCTCCGTCGTTCCTCTCCTCCTC
CGCCGCCGCCGCCGCCGAAGCCGACGAGCAGTAGCCGGTAGGCATGACGAGGCTCGCGGC
AGCCGCGCTCCGGAGGGCCACCGCCGCATCTGGGATCCCCTCGTCCTCCTCGCGCTCGTC
CGTGCTTGCTCCGTTCGCGCCTCGCCTCTTCTCCACCGAGGCGTCCGGAGAAACCCCCGC
GGCGGGCGCCGCCGCCCAGGGGTCGCAGGACGAGCCTTTCTTCAAGCCTTCTGACGAAGG
TGTGGCATATGGAAGGTTCTACAGTGTTATTCCTGGAGGCAGCCGTCTCCCTAAGAGCAT
GCTCAAAACTGATATTATCCACCACCTTGATAAATCTGAACTGTCACTGGACGATGTGAA
GATTGATTATAACAGGGGATATTATCCAGTGGGCGCGTTGTTGAGGTTTTCTTCAGTGCC
ATTATTTAACACAGCAGTCAGGCAAACACGAGAAGGTCGTCAGTACAGGCTTGAGATGAT
CAGTCGTGAGGAGTTTGATCTGAAGCAGTCTTATGATGGAAAAGCTATACTATTGCAAGG
AGTCCCTCGAAATGCTGTACCAGAGGACATAGAACGATTCCTGTGTGGCACCAATGTTGA
ACCTCCGCCATTTGAAAGCTTTCTCAGACCTGGTGTCCCAGATCCTATCAGAGTGGTGCT
GGTTAAATTCCGCTCAAGGACTGATGCCGCCAATGCTTTCATTACTAAGAACCGGGGTTT
CTGCCTGAACAACCCTGTGAGCATGCGTGTTCTTCAATAGCCCGTCCATTTTTATCGTGC
TTATGGCAATCAGCTCCAAAATGAACCCTCTCAGCCTTTGGATCTGAACTCCTATCTGCA
AATGTGGTAGAAAGTTTGACTTTGTACGTTTGCACTCTACTGTCAGTCGCTTTTATGTTA
TTTTGTTTGTGCTTTTAGTTGTGCTACTTCATTTCTCTAATTTCATGTGTAAACTGGAAG
TTGCTGTTGCCCCCAGTTTACAACAGAAACATCAGAAGGAATTATCCGTAATAAATGTTC
AAAATTGCAC