Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0281600-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:9637542:9642093:-1 gene:Os03g0281600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ENDOPLASMIC RETICULUM-TYPE CA2+-ATPASE1 description:Similar to Ca2+-ATPase. (Os03t0281600-01);Similar to Ca2+-ATPase (Fragment). (Os03t0281600-02)
Sequence	ATGGGCAAGGGCGGGCAGGAGGAGGGCAAGCGGCGGGACGGATCCGACGCATCCGGGTCG GAGCCGGCCGCAGCGGCCTTCCCGGCGTGGGCGCGCACGCCGAGCGAGTGCCTCGCGGAG CTGGGCGTCGCGGCGGACCGCGGGCTGTCCTCCGAGGAGGCGGCGGCGCGGCTGCGGCGG TACGGGCCCAACGAGCTGGAGCGGCACGCGGCGCCGTCGGTGTGGAAGCTGGTGCTCGAG CAGTTCGACGACACGCTCGTGCGCATCCTCCTCGCCGCCGCCGTGGTGTCGTTCGTGCTC GCGCTCTACGACGGTGCGGAGGGCGGCGAGGTCGGGGCGACCGCCTTCGTGGAGCCCCTC GTCATCTTCCTCATCCTGATAGTGAACGCCGTCGTCGGAGTCTGGCAGGAGAGCAACGCC GAGAAGGCGCTCGAGGCGCTGAAGGAGATCCAGTCCGAGCACGCAACCGTCAAGCGCGAC GGCCGGTGGTCCCATGGGCTTCCGGCGCGCGACCTCGTCCCCGGAGACATCGTGGAGCTC CGTGTTGGCGACAAGGTCCCGGCAGACATGCGTGTGCTCCAGCTTATCAGCTCCACCCTC CGTGTCGAGCAGGGTTCCCTCACTGGTGAGACTGCTTCGGTTAACAAGACCAGCCATAAA ATCGAGCTGGAGGACACAGACATCCAGGGAAAGGAGTGTATGGTTTTTGCTGGCACTACA ATTGTCAACGGCAGCGCTGTCTGTGTTGTGACGGGCACTGGAATGGACACTGAAATAGGC AAGATCCATGCCCAGATCCAGGAAGCCTCACAAGAGGAAGATGACACGCCACTGAAAAAG AAGCTCAATGAGTTTGGGGAGGCACTGACAGCCATAATTGGGGTGATCTGTGCCTTGGTT TGGCTTATCAACGTTAAGTATTTCCTCACCTGGGAGTATGTGGATGGGTGGCCCAGGAAT TTTAAGTTCTCATTTGAGAAGTGCACGTATTACTTTGAGATTGCAGTGGCACTGGCTGTT GCAGCAATTCCAGAGGGCCTGCCTGCTGTTATCACCACATGCTTGGCGCTCGGCACCAGG AAGATGGCACAAAAGAATGCACTTGTGAGGAAGTTGCCAAGTGTTGAGACACTGGGTTGC ACTACAGTGATTTGCTCCGATAAGACAGGAACATTGACCACCAACCAGATGTCAGCGGTG AAGCTTGTGGCAATTGGGAGGTGGCCTGATACACTTAGGAGCTTTAAGGTTGATGGAACC ACTTATGATCCAAGTGACGGGAAGATAAACGAGTGGCCAAGTTTGAGCATGGATGAAAAT CTCCAGATGATTGCTAAGATTGCTGCAGTTTGCAATGATGCAAGTATTGCTCACTCTGAG CATCAGTATGTTGCCACTGGGATGCCCACAGAGGCTGCTTTGAAGGTTTTGGTTGAGAAA ATGGGCCTTCCTGGTGGATATACTCCATCCCTGGATTCATCTGATTTGCTAAGGTGCTGT CAATGGTGGAACAATGCTGCTAAGAGAGTAGCTACTCTGGAGTTCGATCGGACTAGAAAA TCAATGGGAGTTATTGTAAAAAAAGCAGACTCTGGAAAGAATTTGCTGCTTGTCAAGGGA GCTGTAGAAAATTTGCTAGAAAGGAGTGGCTATATTCAGTTGCTTGATGGATCTGTTGTG CTCCTGGATGAAGGTGCCAAGGCGCTCATATTATCAACACTTCGTGAAATGTCTGCTAGT GCATTGCGATGTTTGGGTTTTGCGTACAAGGAGGATTTGGCGGAATTTGCAACATATGAT GGTGAAGAGCATGCAGCTCACAAATATCTACTTGATCCTTCATACTACTCTTCCATAGAG AGTAATTTGATATTCTGTGGTTTTGTTGGTCTAAGGGATCCTCCCCGAGAAGAAGTCCAC AAAGCAATTGAAGACTGTAGAGCTGCTGGAATACGTGTTATGGTGATTACTGGTGATAAC AAAGAAACAGCAGAGGCGATATGCCGTGAGATTGGAGTTTTTGGTTCCACGGAAGATATT AGTTCAAAGAGCTTCACAGGGAAGGAATTCATGTCTCTTTCAGATAAGAAGAAACTCTTA AGGCAAACAGGTGGCCTTCTCTTCTCTAGGGCTGAGCCGAAACATAAGCAGGAGATAGTT AGATTGCTCAAAGAAGATGGTGAAGTGGTTGCTATGACTGGTGATGGAGTGAATGATGCA CCAGCTCTGAAGTTGGCTGACATTGGAGTTGCTATGGGCATTACAGGGACTGAGGTTGCA AAAGAAGCTTCAGATATGGTTCTTGCAGATGATAACTTCAGTACAATAGTCGCAGCTGTT GGTGAAGGGAGGTCAATCTACGACAATATGAAGGCATTTATAAGATATATGATCTCTTCA AACATCGGGGAAGTTGCTTCCATATTTCTAACGTCAGCTTTAGGTATTCCTGAAGGTCTC ATCCCTGTGCAACTTCTGTGGGTCAATCTTGTTACAGATGGTCCTCCTGCAACGGCTTTG GGGTTCAACCCACCTG

Peptide Sequence

PEP ID	Os03t0281600-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:9637542:9642093:-1 gene:Os03g0281600 transcript:Os03t0281600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ENDOPLASMIC RETICULUM-TYPE CA2+-ATPASE1 description:Similar to Ca2+-ATPase. (Os03t0281600-01);Similar to Ca2+-ATPase (Fragment). (Os03t0281600-02)
Sequence	MGKGGQEEGKRRDGSDASGSEPAAAAFPAWARTPSECLAELGVAADRGLSSEEAAARLRR YGPNELERHAAPSVWKLVLEQFDDTLVRILLAAAVVSFVLALYDGAEGGEVGATAFVEPL VIFLILIVNAVVGVWQESNAEKALEALKEIQSEHATVKRDGRWSHGLPARDLVPGDIVEL RVGDKVPADMRVLQLISSTLRVEQGSLTGETASVNKTSHKIELEDTDIQGKECMVFAGTT IVNGSAVCVVTGTGMDTEIGKIHAQIQEASQEEDDTPLKKKLNEFGEALTAIIGVICALV WLINVKYFLTWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTR KMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMSAVKLVAIGRWPDTLRSFKVDGT TYDPSDGKINEWPSLSMDENLQMIAKIAAVCNDASIAHSEHQYVATGMPTEAALKVLVEK MGLPGGYTPSLDSSDLLRCCQWWNNAAKRVATLEFDRTRKSMGVIVKKADSGKNLLLVKG AVENLLERSGYIQLLDGSVVLLDEGAKALILSTLREMSASALRCLGFAYKEDLAEFATYD GEEHAAHKYLLDPSYYSSIESNLIFCGFVGLRDPPREEVHKAIEDCRAAGIRVMVITGDN KETAEAICREIGVFGSTEDISSKSFTGKEFMSLSDKKKLLRQTGGLLFSRAEPKHKQEIV RLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFSTIVAAV GEGRSIYDNMKAFIRYMISSNIGEVASIFLTSALGIPEGLIPVQLLWVNLVTDGPPATAL GFNPP

Transcript Sequence

Transcript ID	Os03t0281600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:9637542:9642093:-1 gene:Os03g0281600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ENDOPLASMIC RETICULUM-TYPE CA2+-ATPASE1 description:Similar to Ca2+-ATPase. (Os03t0281600-01);Similar to Ca2+-ATPase (Fragment). (Os03t0281600-02)
Sequence	GGAAGGGAGAAAAAGCTTCTCCTCTCTTCCGCATTGCGTTGCGCCACCAATCTCCTCTCC CCATCTCGGCCTCCTCGCCGCCACCATCCGCCTCTAGGGTTTCGGTTCCATGCGATCTCG CCGCGGCGGCGGAAGGGAACCCTAGGTAGGAGGCTCTCCTCTTGTTGAGTTTGAATCTGA GGTTCGTGAACCAATGGGCAAGGGCGGGCAGGAGGAGGGCAAGCGGCGGGACGGATCCGA CGCATCCGGGTCGGAGCCGGCCGCAGCGGCCTTCCCGGCGTGGGCGCGCACGCCGAGCGA GTGCCTCGCGGAGCTGGGCGTCGCGGCGGACCGCGGGCTGTCCTCCGAGGAGGCGGCGGC GCGGCTGCGGCGGTACGGGCCCAACGAGCTGGAGCGGCACGCGGCGCCGTCGGTGTGGAA GCTGGTGCTCGAGCAGTTCGACGACACGCTCGTGCGCATCCTCCTCGCCGCCGCCGTGGT GTCGTTCGTGCTCGCGCTCTACGACGGTGCGGAGGGCGGCGAGGTCGGGGCGACCGCCTT CGTGGAGCCCCTCGTCATCTTCCTCATCCTGATAGTGAACGCCGTCGTCGGAGTCTGGCA GGAGAGCAACGCCGAGAAGGCGCTCGAGGCGCTGAAGGAGATCCAGTCCGAGCACGCAAC CGTCAAGCGCGACGGCCGGTGGTCCCATGGGCTTCCGGCGCGCGACCTCGTCCCCGGAGA CATCGTGGAGCTCCGTGTTGGCGACAAGGTCCCGGCAGACATGCGTGTGCTCCAGCTTAT CAGCTCCACCCTCCGTGTCGAGCAGGGTTCCCTCACTGGTGAGACTGCTTCGGTTAACAA GACCAGCCATAAAATCGAGCTGGAGGACACAGACATCCAGGGAAAGGAGTGTATGGTTTT TGCTGGCACTACAATTGTCAACGGCAGCGCTGTCTGTGTTGTGACGGGCACTGGAATGGA CACTGAAATAGGCAAGATCCATGCCCAGATCCAGGAAGCCTCACAAGAGGAAGATGACAC GCCACTGAAAAAGAAGCTCAATGAGTTTGGGGAGGCACTGACAGCCATAATTGGGGTGAT CTGTGCCTTGGTTTGGCTTATCAACGTTAAGTATTTCCTCACCTGGGAGTATGTGGATGG GTGGCCCAGGAATTTTAAGTTCTCATTTGAGAAGTGCACGTATTACTTTGAGATTGCAGT GGCACTGGCTGTTGCAGCAATTCCAGAGGGCCTGCCTGCTGTTATCACCACATGCTTGGC GCTCGGCACCAGGAAGATGGCACAAAAGAATGCACTTGTGAGGAAGTTGCCAAGTGTTGA GACACTGGGTTGCACTACAGTGATTTGCTCCGATAAGACAGGAACATTGACCACCAACCA GATGTCAGCGGTGAAGCTTGTGGCAATTGGGAGGTGGCCTGATACACTTAGGAGCTTTAA GGTTGATGGAACCACTTATGATCCAAGTGACGGGAAGATAAACGAGTGGCCAAGTTTGAG CATGGATGAAAATCTCCAGATGATTGCTAAGATTGCTGCAGTTTGCAATGATGCAAGTAT TGCTCACTCTGAGCATCAGTATGTTGCCACTGGGATGCCCACAGAGGCTGCTTTGAAGGT TTTGGTTGAGAAAATGGGCCTTCCTGGTGGATATACTCCATCCCTGGATTCATCTGATTT GCTAAGGTGCTGTCAATGGTGGAACAATGCTGCTAAGAGAGTAGCTACTCTGGAGTTCGA TCGGACTAGAAAATCAATGGGAGTTATTGTAAAAAAAGCAGACTCTGGAAAGAATTTGCT GCTTGTCAAGGGAGCTGTAGAAAATTTGCTAGAAAGGAGTGGCTATATTCAGTTGCTTGA TGGATCTGTTGTGCTCCTGGATGAAGGTGCCAAGGCGCTCATATTATCAACACTTCGTGA AATGTCTGCTAGTGCATTGCGATGTTTGGGTTTTGCGTACAAGGAGGATTTGGCGGAATT TGCAACATATGATGGTGAAGAGCATGCAGCTCACAAATATCTACTTGATCCTTCATACTA CTCTTCCATAGAGAGTAATTTGATATTCTGTGGTTTTGTTGGTCTAAGGGATCCTCCCCG AGAAGAAGTCCACAAAGCAATTGAAGACTGTAGAGCTGCTGGAATACGTGTTATGGTGAT TACTGGTGATAACAAAGAAACAGCAGAGGCGATATGCCGTGAGATTGGAGTTTTTGGTTC CACGGAAGATATTAGTTCAAAGAGCTTCACAGGGAAGGAATTCATGTCTCTTTCAGATAA GAAGAAACTCTTAAGGCAAACAGGTGGCCTTCTCTTCTCTAGGGCTGAGCCGAAACATAA GCAGGAGATAGTTAGATTGCTCAAAGAAGATGGTGAAGTGGTTGCTATGACTGGTGATGG AGTGAATGATGCACCAGCTCTGAAGTTGGCTGACATTGGAGTTGCTATGGGCATTACAGG GACTGAGGTTGCAAAAGAAGCTTCAGATATGGTTCTTGCAGATGATAACTTCAGTACAAT AGTCGCAGCTGTTGGTGAAGGGAGGTCAATCTACGACAATATGAAGGCATTTATAAGATA TATGATCTCTTCAAACATCGGGGAAGTTGCTTCCATATTTCTAACGTCAGCTTTAGGTAT TCCTGAAGGTCTCATCCCTGTGCAACTTCTGTGGGTCAATCTTGTTACAGATGGTCCTCC TGCAACGGCTTTGGGGTTCAACCCACCTG