Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0281300-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:9619836:9628261:-1 gene:Os03g0281300 gene_biotype:protein_coding transcript_biotype:protein_coding description:phosphotransferase system, PEP-utilising enzyme, N-terminal domain containing protein. (Os03t0281300-01)
Sequence	ATGTCGTGGCTCCGCAACGCGGTGCACCGCGCGGTGGAGGCGAGCGGCGGGCCCCTCCTC ACCCGCACCGTCCGCTCCTCCCTCGGCACCGTCGTCCACCACGCCGGCCAGGCCGTCGCG GGCGGCGCCAGGCTCATCAACGACCGCATCGGGAGCCGGAGCTACAAGAGCATGAGGCTG ACGGCGAAGAGGCTGGAGGACGCGGCGCTGTCCTACAGAGGGGAGGACCGGGTGCAGCTG CTGCGCCGGTGGCTCGTCATGCTCAGGGAGACCCAGCGCGCGGCCGCGGCGGAGAAGGAG GCGAAGCGCGCGGGCCATCCTGATCAACACCTGCCCGTGTTGGATCTGTATATGGATTAC GAGACCGGGGCCGAGCCGATGAACTTTATCCATGTCTTCCTCTACAGCCAAGCGCTCGAA TGCCTCGTTTTATCCATGATTATGGAATTCCCTACTGAAGAAGAAGCCTCGCTTCTCTCA GAAGTTTTTGGATTGTGTCTTCCTGGAGGAAAGGATGTCCACAATGCAATACTTAGTAGC ATAAAGGAGTTGGCAAAGTTATTTTCAACTTACCATGATGAAGTGTTGGCAAAACGTGCT GAGCTGCTTCAATTTGCTCAATGTGCAATCTCAGGGTTAAAAATAAATCCTGAAATTTCA AGATTAGATGATGAAATCTTGCAGCTACAACAACGGATAAATGGAATGGACGCTCTTCGA TCTAATTCGACCAGTAGGCGTAGCAAAGCATCACAAACAGTCGCGGAGGGTTTCAGAACT GCAGTTAATGAGATTCGCTTATGCTCTAGAATGGAAGAACTTGTATTGATGAAGAAATCA ATGCATCATGGCAACTCATTCGAGACTTATTTTGAGAAGGTTAATAAATTGAAGGTTTTG TCAGAATCACTTGCAAATTCAGCTGCAAAAGCAGAAAGGAGAATCATGGAAAATAGGCTA CAAAAGGAGGAATCTCTTATTTTCCGAGTTACCAAAACAAATGAAGTTAGTGTAACTGAA AAGGAAATACTGGCTGAGATCTCTGGGCTTCAGAAGCAAAAGGATCTACTTGAGGATGAA CTAAAGAAAGTAAATAATATACTGAATGCGGCTGTAATGAAGCTTAAAAAAACTAGAGAG GAGAGAGACCAATTCGATGAAGCCAGCAATCAGATTGTGCTGCACTTGAAAGCAAAGGAG GAAGAACTGTCAAGATCTATTGCTTCCTGCAAAGTTGAGTCAAGCACTGTCGGTGCATGG ATCATATTTTTAGAAGATACATGGAAGTTGCAGTCTTTGTATGAAGAACTAAGGAAAAAA CAAGCCAATGATGAACTGGACAAGTGTGCGACTTGCTTTGCAAAATTGATTAATCATCAT CTTTATGCACGAGTGGAAGAGCTGAGCACTTGCATTGATAGTATAAAGACCTTTGTTGAT AACTTGAAAATATTTGATAACAGATCGGTATCAGCGGAAGATGGAAACAATGGTTCGTCC AAGCAATCAAATCCACGTAAATACCTTGAGGAAGAATATCTGGAAGCTGAGAAAAAGGTG GTAGCAGCATTCAGTTTGGTTGATAACATCAGAGCAATATATTTGTCCAATCAAGATTAT CAAGCCAGGAGAGATGATCCTGACGTGAAAAAACTATTTGCCAACATTGACAAGCTGCGG GTCGAGTTTGAATCGGTTCCACGGCCACTGCTGCAAATCGAGATCAAAGAAAGAGAAGAG AGAGCAAAGCAATCTCGTTCCTTGCAGGCTGCTCGCTCATCAAGACAAGCAGGACACGAG TCCCCAATACCTGCTCAACTCAGGACACGCCTGCCATCAGAGTCCGACTCAGAACTGGCG AAATCTGACCCAGAGTACAGGGAGTATTCGGCTGATGACATAAGTGGGTGGGAGTTTGAT GACCTTGAAGATGATGGGGCAAGGCTTTCAGTGAAATCTATATAG

Peptide Sequence

PEP ID	Os03t0281300-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:9619836:9628261:-1 gene:Os03g0281300 transcript:Os03t0281300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:phosphotransferase system, PEP-utilising enzyme, N-terminal domain containing protein. (Os03t0281300-01)
Sequence	MSWLRNAVHRAVEASGGPLLTRTVRSSLGTVVHHAGQAVAGGARLINDRIGSRSYKSMRL TAKRLEDAALSYRGEDRVQLLRRWLVMLRETQRAAAAEKEAKRAGHPDQHLPVLDLYMDY ETGAEPMNFIHVFLYSQALECLVLSMIMEFPTEEEASLLSEVFGLCLPGGKDVHNAILSS IKELAKLFSTYHDEVLAKRAELLQFAQCAISGLKINPEISRLDDEILQLQQRINGMDALR SNSTSRRSKASQTVAEGFRTAVNEIRLCSRMEELVLMKKSMHHGNSFETYFEKVNKLKVL SESLANSAAKAERRIMENRLQKEESLIFRVTKTNEVSVTEKEILAEISGLQKQKDLLEDE LKKVNNILNAAVMKLKKTREERDQFDEASNQIVLHLKAKEEELSRSIASCKVESSTVGAW IIFLEDTWKLQSLYEELRKKQANDELDKCATCFAKLINHHLYARVEELSTCIDSIKTFVD NLKIFDNRSVSAEDGNNGSSKQSNPRKYLEEEYLEAEKKVVAAFSLVDNIRAIYLSNQDY QARRDDPDVKKLFANIDKLRVEFESVPRPLLQIEIKEREERAKQSRSLQAARSSRQAGHE SPIPAQLRTRLPSESDSELAKSDPEYREYSADDISGWEFDDLEDDGARLSVKSI

Transcript Sequence

Transcript ID	Os03t0281300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:9619836:9628261:-1 gene:Os03g0281300 gene_biotype:protein_coding transcript_biotype:protein_coding description:phosphotransferase system, PEP-utilising enzyme, N-terminal domain containing protein. (Os03t0281300-01)
Sequence	ATTCCCAACCCGCGCGCGCCCCCTCCTCCCCCTCCTCCTCCTCTTCCTCCTCCTCCCTGG ATTCCTACCTCTCGTTTCCCCGAGCAGACGCTCCCCTATCCCGCTGCGAAGGAGAGGAGG CGGTGGCGGAGGCGGAGGTGGAGATCGACCTAGCTAGCTAGCTCACGATGTCGTGGCTCC GCAACGCGGTGCACCGCGCGGTGGAGGCGAGCGGCGGGCCCCTCCTCACCCGCACCGTCC GCTCCTCCCTCGGCACCGTCGTCCACCACGCCGGCCAGGCCGTCGCGGGCGGCGCCAGGC TCATCAACGACCGCATCGGGAGCCGGAGCTACAAGAGCATGAGGCTGACGGCGAAGAGGC TGGAGGACGCGGCGCTGTCCTACAGAGGGGAGGACCGGGTGCAGCTGCTGCGCCGGTGGC TCGTCATGCTCAGGGAGACCCAGCGCGCGGCCGCGGCGGAGAAGGAGGCGAAGCGCGCGG GCCATCCTGATCAACACCTGCCCGTGTTGGATCTGTATATGGATTACGAGACCGGGGCCG AGCCGATGAACTTTATCCATGTCTTCCTCTACAGCCAAGCGCTCGAATGCCTCGTTTTAT CCATGATTATGGAATTCCCTACTGAAGAAGAAGCCTCGCTTCTCTCAGAAGTTTTTGGAT TGTGTCTTCCTGGAGGAAAGGATGTCCACAATGCAATACTTAGTAGCATAAAGGAGTTGG CAAAGTTATTTTCAACTTACCATGATGAAGTGTTGGCAAAACGTGCTGAGCTGCTTCAAT TTGCTCAATGTGCAATCTCAGGGTTAAAAATAAATCCTGAAATTTCAAGATTAGATGATG AAATCTTGCAGCTACAACAACGGATAAATGGAATGGACGCTCTTCGATCTAATTCGACCA GTAGGCGTAGCAAAGCATCACAAACAGTCGCGGAGGGTTTCAGAACTGCAGTTAATGAGA TTCGCTTATGCTCTAGAATGGAAGAACTTGTATTGATGAAGAAATCAATGCATCATGGCA ACTCATTCGAGACTTATTTTGAGAAGGTTAATAAATTGAAGGTTTTGTCAGAATCACTTG CAAATTCAGCTGCAAAAGCAGAAAGGAGAATCATGGAAAATAGGCTACAAAAGGAGGAAT CTCTTATTTTCCGAGTTACCAAAACAAATGAAGTTAGTGTAACTGAAAAGGAAATACTGG CTGAGATCTCTGGGCTTCAGAAGCAAAAGGATCTACTTGAGGATGAACTAAAGAAAGTAA ATAATATACTGAATGCGGCTGTAATGAAGCTTAAAAAAACTAGAGAGGAGAGAGACCAAT TCGATGAAGCCAGCAATCAGATTGTGCTGCACTTGAAAGCAAAGGAGGAAGAACTGTCAA GATCTATTGCTTCCTGCAAAGTTGAGTCAAGCACTGTCGGTGCATGGATCATATTTTTAG AAGATACATGGAAGTTGCAGTCTTTGTATGAAGAACTAAGGAAAAAACAAGCCAATGATG AACTGGACAAGTGTGCGACTTGCTTTGCAAAATTGATTAATCATCATCTTTATGCACGAG TGGAAGAGCTGAGCACTTGCATTGATAGTATAAAGACCTTTGTTGATAACTTGAAAATAT TTGATAACAGATCGGTATCAGCGGAAGATGGAAACAATGGTTCGTCCAAGCAATCAAATC CACGTAAATACCTTGAGGAAGAATATCTGGAAGCTGAGAAAAAGGTGGTAGCAGCATTCA GTTTGGTTGATAACATCAGAGCAATATATTTGTCCAATCAAGATTATCAAGCCAGGAGAG ATGATCCTGACGTGAAAAAACTATTTGCCAACATTGACAAGCTGCGGGTCGAGTTTGAAT CGGTTCCACGGCCACTGCTGCAAATCGAGATCAAAGAAAGAGAAGAGAGAGCAAAGCAAT CTCGTTCCTTGCAGGCTGCTCGCTCATCAAGACAAGCAGGACACGAGTCCCCAATACCTG CTCAACTCAGGACACGCCTGCCATCAGAGTCCGACTCAGAACTGGCGAAATCTGACCCAG AGTACAGGGAGTATTCGGCTGATGACATAAGTGGGTGGGAGTTTGATGACCTTGAAGATG ATGGGGCAAGGCTTTCAGTGAAATCTATATAGGAGGAGCATCAAATCTGGGCTCAAGTCC TGAATAGTTCGTGTAGGGATAGAATCACTGGCCCAAAAATTTGGAGAACGTGTTGTAGTG GAGTGCTGTGTACAAAACTGTACATTGTAGCCTTCGTTGCCGTAAAGATTTCTTTGCTTC ATCTTG