Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0280000-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:9557535:9566491:-1 gene:Os03g0280000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ABC TRANSPORTER B FAMILY MEMBER 13 description:Similar to MDR-like ABC transporter. (Os03t0280000-01)
Sequence	ATGATGCCGACGGGGCTGTTTGGATGGGCGTCTCCGCATGTGCAGCCGCTTACCCCGGTG TCCGAGGTGTCGGAGCCGCCGGAGTCGCCTTCGCCGTACGGGGATGGGCCGGCGGGGGAT GCTGGGGTGGGGGCGAGGGAAGGGGAAGGCCTCGGCCCCGGCGAGGAGGAGGTGGAGGAC GACGAGGTCGAGCCCCCGCCCTCCGCGGTGTCGTTCTGGAGGCTGTTCGAGTTCGCTGAC GGAATCGACTGGGCGCTCATGGTCGCTGGCGCTCTCGCCGCCGCGGCACACGGCGCTGCT CTTGTTATCTACCTCCACTACTTTGGCAGGTCCTTGAATTTGCTCGACTCTGAACGGGTT GAGTCTGCTCTCCACGGCCGCAGTGATGAACTCCTTCACCGGTTTAAGGAGCATGCTCTG TATATTGTCTATATAGCTGGTGGTGTGTTTGCTGCAGGATGGATAGAGGTGTCCTGTTGG ATTCTTACTGGGGAACGGCAGACTGCTGTCATAAGATCAAAATATGTTCAGGTCTTGCTA AATCAAGACATGAGTTTCTTTGATACGTATGGAAACAACGGTGATATAGTTAGTCAAGTG CTGAGCGATGTATTGCTTATTCAGTCAGCCATCAGTGAGAAAGTTGGGAACTACATACAC AATATGGCTACATTTGTTGGTGGTCTTGTTGTTGGGCTGATCAATTGTTGGCAAATAACT CTTCTAACACTTGCCACTGGTCCCTTGATTGTTGCTGCTGGAGGAATATCTAACATATTT CTTCACAGGCTGGCCGAGAACATTCAAGATGCATATGCTGAAGCAGCTAGTATTGCTGAG CAGGCCATTGCATACATCAGGACGCTATATGCTTTTACAAATGAAACTCTGGCAAAGTAC TCATATGCTACGTCTCTTCAAGCAACTCTGAGATATGGAATATTGATAAGCCTTGTGCAA GGGATTGGCCTTGGATTTACTTATGGGCTTGCCATTTGTTCTTGTGCTCTGCAACTTTGG GTTGGAAGGCACCTGATTGCTCGGGGAAAAGCTGATGGTGGTCAAGTTGTGGTAGCTTTG TTCTCCGTAATTCTAAGTGGCCTTGGTTTGAACCAAGCAGCTACGAACTTCTATTCATTT GAACAAGGACGTATTGCTGCTTATAGACTGTATGAGATGATAAGCCGTTCAACTTCCAGC ACCAATCAAGAAGGCTCCACCTTGCCTCTAGTGCAAGGGAACATTGAATTCAGGAATGTG TATTTTAGTTATCTCTCCCGGCCTGAAATTCCAATTTTAAGTGGTTTCTTTCTCACTGTA CCTGCCAGAAAAACTGTTGCACTTGTTGGTAGAAACGGCTCAGGGAAAAGTAGCATAATT CCTCTAATGGAGAGATTCTATGATCCAACCTTAGGAGAAGTACTTTTGGATGGGGAAAAT ATAAAAAATTTGAAAGTAGAATGGTTGAGAAGCCAAATTGGTCTAGTGACCCAAGAACCC GCATTGTTGAGTTTGAGCATTCGGGAAAATATTGCTTACGGAAGATCTGCTACCTTTGAT CAGATAGAAGAGGCAGCTAAGACAGCACATGCCCATGGGTTCATTAGTTCACTTGAAAAG GGATATGAAACCCAGGTGGGTCGAGCTGGTATGGCCCTGAGTGATGAACAAAAGATCAAA ATTTCTATTGCCCGGGCCGTGCTTTCAAACCCTTCAATTCTTTTGCTTGATGAGGTCACA GGAGGGCTTGATTTTGAAGCTGAAAAAGCTGTGCAAGAAGCATTAGATGTTCTCATGTTG GGAAGGTCAACCATTATAATAGCTCGGCGTCTCAGCCTCATTAAAAATGCTGATTACATA GCTGTGATGGAGGAGGGACATCTTGTTGAAATGGGGACACATGATGAACTCCTGAACTTG GATGGCCTTTATGCTGAGCTTTTAAGGTGTGAGGAAGCAACAAAGCTTCCCAAGAGGATG CCAACCAAGAATGGCAAGGAGCGTAAGTCACTCCAAATTGAGGATCTGTCGGCCAGCCAA AGTTTTCAAGAATCATCCTCTCCCAAGATGGCCAAATCACCTTCTCTTCAAAGAACACAT GGAATGCTTCAGTTTTGGCGATCAGACACAAACAAAAACTCTCATGATTCCCCGAAGGAT CAGAGCCCACCTTCAGAACAAACTATAGACAACGGGATACCTTTGGTTGCAACCGAGAGA GTGCCATCCATCAAGAGACAGGATAGTTTTGAAATGAAATTGCCCGATCTTCCAAAAGTT GACATCCATCCCATTCAACGACAGTCTTCAAAAAATTCAGAACCTGACTCACCTATATCT CCTCTCTTAACTTCTGATCCAAAGAACGAGCGATCACATTCACAAACTTTTAGTAGGCCG CAGAGTGAACGGGATGATACAAGTTCTGAACAGAGTGAACCAGAAGAGTTGCAACACCAT AAACCTCCATCCTTTTGGAGACTTGCAGCACTTAGTATTGCTGAATGGCCCTATGCACTT TTAGGCACAATCGGTGCGGCTATATTTGGTTCCTTCAATCCACTGCTTGCTTACACAATA GCACTAATAGTGTCAGCATATTACCGAATAGATGTTAGCGACATGCACCATGAAGTGAAC AGGTGGTGCTTATTCATAGTAGGCATGGGTGTTATTACAGTGCTGGTCAACTGGTTGCAA CATTTCTATTTTGGAATAATGGGAGAGAAGATGACCGAGCGCATAAGAAGAATGATGTTC TCTGCAATTCTGCGCAATGAAGTTGGATGGTTTGACAAAGAGGAGAACAGTGCTGATACA CTATCCATGCGCTTGGCAAATGATGCTACATTTGTCCGTGCCGCATTCAGTAATCGCCTT TCCATATTCATACAAGACACCGCTGCAGTTTCAGTGGCTCTTCTTATTGGAATGCTGTTG GGATGGCGGGTTGCACTTGTTGCTCTTGCAACTTTACCTGTTCTTGTCATCTCTGCTATT GCTCAGAAATTGTGGCTTGCTGGCTTCTCAAAAGGAATCCAGGAAATGCATAGAAAGGCC TCACTAGTTCTTGAAGACGCAGTCCGAAACATTTACACTGTTGTAGCCTTCTGTGCTGGG AACAAGATAATGGAACTATACAGGTTACATCTTTGTAAGATACTGAAGCAGAGTCTATTG CAAGGATTGGCCATAGGTTTTGGCTTTGGATTCTCGCAGTTTCTTCTTTTTGCCTGCAAT GCCCTTCTTCTTTGGTACACTGCCATTTCAGTGGACAAGCAGCGACTCACAATTGCCACA GGGTTAAAAGAGTACATTCTCTTTTCATTTGCATCATTTGCATTGGTGGAGCCTTTTGGA CTCGCTCCTTACATTCTTAAAAGGCGGAAGTCTCTCATTTCAGTGTTTCAAATCATTGAC CGGGAACCAAAGATTGATCCTGATGATAACACCGGTTTAAAACCACCTAATGTTTACGGG AGCATTGAATTCAAGAATGTTGATTTCTCTTATCCAGCTCGTCCTGAAATTCTTGTGCTG AGCAATTTTAATCTTAAAGTGAGTGGTGGACAAACAGTTGCCGTGGTAGGGGTTTCAGGA TCGGGGAAGAGCACTATAATTTCTTTAATTGAGAGATTCTATGACCCAGTGACTGGCCAA GTTCTGTTGGATGGCCGAGATATAAAATCATTCAACCTGAGATGGTTGCGAAGTCACATG GGCCTAATTCAGCAAGAGCCAGTTATTTTCTCGACAACGATAAGAGAGAACATTATTTAT GCAAGGCACAATGCAACAGAGGCTGAGATGAAGGAAGCTGCGAGGATAGCAAATGCCCAC CATTTCATTAGCAGCTTGCCACATGGCTACGACACTCATGTTGGAATGAGGGGGGTTGAC CTTACAGCTGGGCAGAAGCAACGAATTGCAATTGCTAGGGTGGTTTTGAAGAATGCACCT ATTTTGTTGTTAGATGAGGCCAGCTCCGCAATTGAGTCTGAATCAAGTAGGGTGGTGCAG GAAGCTCTTGACACATTGGTCATGGGGAACAAAACAACCATCCTCATTGCGCACAGGGCA GCGATGATGAAGCATGTGGATAACATTGTCGTCCTAAATGGTGGTAGGATAGTTGAGCAG GGTACACATGACTCTCTGATGGACCTGAATGGTCTCTATGTTAGATTGATGCAACCCCAT TTTGGCAAGGGCCTTCGCCAGCATCGGCTAATGTAA

Peptide Sequence

PEP ID	Os03t0280000-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:9557535:9566491:-1 gene:Os03g0280000 transcript:Os03t0280000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ABC TRANSPORTER B FAMILY MEMBER 13 description:Similar to MDR-like ABC transporter. (Os03t0280000-01)
Sequence	MMPTGLFGWASPHVQPLTPVSEVSEPPESPSPYGDGPAGDAGVGAREGEGLGPGEEEVED DEVEPPPSAVSFWRLFEFADGIDWALMVAGALAAAAHGAALVIYLHYFGRSLNLLDSERV ESALHGRSDELLHRFKEHALYIVYIAGGVFAAGWIEVSCWILTGERQTAVIRSKYVQVLL NQDMSFFDTYGNNGDIVSQVLSDVLLIQSAISEKVGNYIHNMATFVGGLVVGLINCWQIT LLTLATGPLIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAIAYIRTLYAFTNETLAKY SYATSLQATLRYGILISLVQGIGLGFTYGLAICSCALQLWVGRHLIARGKADGGQVVVAL FSVILSGLGLNQAATNFYSFEQGRIAAYRLYEMISRSTSSTNQEGSTLPLVQGNIEFRNV YFSYLSRPEIPILSGFFLTVPARKTVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGEN IKNLKVEWLRSQIGLVTQEPALLSLSIRENIAYGRSATFDQIEEAAKTAHAHGFISSLEK GYETQVGRAGMALSDEQKIKISIARAVLSNPSILLLDEVTGGLDFEAEKAVQEALDVLML GRSTIIIARRLSLIKNADYIAVMEEGHLVEMGTHDELLNLDGLYAELLRCEEATKLPKRM PTKNGKERKSLQIEDLSASQSFQESSSPKMAKSPSLQRTHGMLQFWRSDTNKNSHDSPKD QSPPSEQTIDNGIPLVATERVPSIKRQDSFEMKLPDLPKVDIHPIQRQSSKNSEPDSPIS PLLTSDPKNERSHSQTFSRPQSERDDTSSEQSEPEELQHHKPPSFWRLAALSIAEWPYAL LGTIGAAIFGSFNPLLAYTIALIVSAYYRIDVSDMHHEVNRWCLFIVGMGVITVLVNWLQ HFYFGIMGEKMTERIRRMMFSAILRNEVGWFDKEENSADTLSMRLANDATFVRAAFSNRL SIFIQDTAAVSVALLIGMLLGWRVALVALATLPVLVISAIAQKLWLAGFSKGIQEMHRKA SLVLEDAVRNIYTVVAFCAGNKIMELYRLHLCKILKQSLLQGLAIGFGFGFSQFLLFACN ALLLWYTAISVDKQRLTIATGLKEYILFSFASFALVEPFGLAPYILKRRKSLISVFQIID REPKIDPDDNTGLKPPNVYGSIEFKNVDFSYPARPEILVLSNFNLKVSGGQTVAVVGVSG SGKSTIISLIERFYDPVTGQVLLDGRDIKSFNLRWLRSHMGLIQQEPVIFSTTIRENIIY ARHNATEAEMKEAARIANAHHFISSLPHGYDTHVGMRGVDLTAGQKQRIAIARVVLKNAP ILLLDEASSAIESESSRVVQEALDTLVMGNKTTILIAHRAAMMKHVDNIVVLNGGRIVEQ GTHDSLMDLNGLYVRLMQPHFGKGLRQHRLM

Transcript Sequence

Transcript ID	Os03t0280000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:9557535:9566491:-1 gene:Os03g0280000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ABC TRANSPORTER B FAMILY MEMBER 13 description:Similar to MDR-like ABC transporter. (Os03t0280000-01)
Sequence	AGGAGAAACCCACGCACGCACAACCCACCCACCCCCACCCACCCGGCAGCGCCGCGCCTG CCTCCTCCTCGCCGGCGACGAGCCGCCGCCGCCGCCGCTTCTCCTCGGTTGCTGCTCGCC GGAGGAGGGGGGAGATTCCGGTGTGGCGTGGGTGCACTCCCGTGTGGGAGACGCGGCCGA ATTTCTCTGACCGGGTCTCCCTTCTGAGTTGCCGTGTGCTACCGAGAAGCTTTCAAAAGA GGCATTCGGTTTTGTGGCGCTGGTCTCTTCGCGGAGGCTAATTTAATCGGAGTCTCGCTT GGGGGAAGTGACCTGGTCGCCGCCTCCGCCGCCGCCGCCGCCGCCGCTCGTCGTTGCCGT CGAGGGGAGAGAGGGGAGCTGATGAGCTCCTCCGAATCCTAGGGTTTTTGACCGTGTCCT CGAGCTCTGCAAGGCTTTGGAGTAGTTGATGATGCCGACGGGGCTGTTTGGATGGGCGTC TCCGCATGTGCAGCCGCTTACCCCGGTGTCCGAGGTGTCGGAGCCGCCGGAGTCGCCTTC GCCGTACGGGGATGGGCCGGCGGGGGATGCTGGGGTGGGGGCGAGGGAAGGGGAAGGCCT CGGCCCCGGCGAGGAGGAGGTGGAGGACGACGAGGTCGAGCCCCCGCCCTCCGCGGTGTC GTTCTGGAGGCTGTTCGAGTTCGCTGACGGAATCGACTGGGCGCTCATGGTCGCTGGCGC TCTCGCCGCCGCGGCACACGGCGCTGCTCTTGTTATCTACCTCCACTACTTTGGCAGGTC CTTGAATTTGCTCGACTCTGAACGGGTTGAGTCTGCTCTCCACGGCCGCAGTGATGAACT CCTTCACCGGTTTAAGGAGCATGCTCTGTATATTGTCTATATAGCTGGTGGTGTGTTTGC TGCAGGATGGATAGAGGTGTCCTGTTGGATTCTTACTGGGGAACGGCAGACTGCTGTCAT AAGATCAAAATATGTTCAGGTCTTGCTAAATCAAGACATGAGTTTCTTTGATACGTATGG AAACAACGGTGATATAGTTAGTCAAGTGCTGAGCGATGTATTGCTTATTCAGTCAGCCAT CAGTGAGAAAGTTGGGAACTACATACACAATATGGCTACATTTGTTGGTGGTCTTGTTGT TGGGCTGATCAATTGTTGGCAAATAACTCTTCTAACACTTGCCACTGGTCCCTTGATTGT TGCTGCTGGAGGAATATCTAACATATTTCTTCACAGGCTGGCCGAGAACATTCAAGATGC ATATGCTGAAGCAGCTAGTATTGCTGAGCAGGCCATTGCATACATCAGGACGCTATATGC TTTTACAAATGAAACTCTGGCAAAGTACTCATATGCTACGTCTCTTCAAGCAACTCTGAG ATATGGAATATTGATAAGCCTTGTGCAAGGGATTGGCCTTGGATTTACTTATGGGCTTGC CATTTGTTCTTGTGCTCTGCAACTTTGGGTTGGAAGGCACCTGATTGCTCGGGGAAAAGC TGATGGTGGTCAAGTTGTGGTAGCTTTGTTCTCCGTAATTCTAAGTGGCCTTGGTTTGAA CCAAGCAGCTACGAACTTCTATTCATTTGAACAAGGACGTATTGCTGCTTATAGACTGTA TGAGATGATAAGCCGTTCAACTTCCAGCACCAATCAAGAAGGCTCCACCTTGCCTCTAGT GCAAGGGAACATTGAATTCAGGAATGTGTATTTTAGTTATCTCTCCCGGCCTGAAATTCC AATTTTAAGTGGTTTCTTTCTCACTGTACCTGCCAGAAAAACTGTTGCACTTGTTGGTAG AAACGGCTCAGGGAAAAGTAGCATAATTCCTCTAATGGAGAGATTCTATGATCCAACCTT AGGAGAAGTACTTTTGGATGGGGAAAATATAAAAAATTTGAAAGTAGAATGGTTGAGAAG CCAAATTGGTCTAGTGACCCAAGAACCCGCATTGTTGAGTTTGAGCATTCGGGAAAATAT TGCTTACGGAAGATCTGCTACCTTTGATCAGATAGAAGAGGCAGCTAAGACAGCACATGC CCATGGGTTCATTAGTTCACTTGAAAAGGGATATGAAACCCAGGTGGGTCGAGCTGGTAT GGCCCTGAGTGATGAACAAAAGATCAAAATTTCTATTGCCCGGGCCGTGCTTTCAAACCC TTCAATTCTTTTGCTTGATGAGGTCACAGGAGGGCTTGATTTTGAAGCTGAAAAAGCTGT GCAAGAAGCATTAGATGTTCTCATGTTGGGAAGGTCAACCATTATAATAGCTCGGCGTCT CAGCCTCATTAAAAATGCTGATTACATAGCTGTGATGGAGGAGGGACATCTTGTTGAAAT GGGGACACATGATGAACTCCTGAACTTGGATGGCCTTTATGCTGAGCTTTTAAGGTGTGA GGAAGCAACAAAGCTTCCCAAGAGGATGCCAACCAAGAATGGCAAGGAGCGTAAGTCACT CCAAATTGAGGATCTGTCGGCCAGCCAAAGTTTTCAAGAATCATCCTCTCCCAAGATGGC CAAATCACCTTCTCTTCAAAGAACACATGGAATGCTTCAGTTTTGGCGATCAGACACAAA CAAAAACTCTCATGATTCCCCGAAGGATCAGAGCCCACCTTCAGAACAAACTATAGACAA CGGGATACCTTTGGTTGCAACCGAGAGAGTGCCATCCATCAAGAGACAGGATAGTTTTGA AATGAAATTGCCCGATCTTCCAAAAGTTGACATCCATCCCATTCAACGACAGTCTTCAAA AAATTCAGAACCTGACTCACCTATATCTCCTCTCTTAACTTCTGATCCAAAGAACGAGCG ATCACATTCACAAACTTTTAGTAGGCCGCAGAGTGAACGGGATGATACAAGTTCTGAACA GAGTGAACCAGAAGAGTTGCAACACCATAAACCTCCATCCTTTTGGAGACTTGCAGCACT TAGTATTGCTGAATGGCCCTATGCACTTTTAGGCACAATCGGTGCGGCTATATTTGGTTC CTTCAATCCACTGCTTGCTTACACAATAGCACTAATAGTGTCAGCATATTACCGAATAGA TGTTAGCGACATGCACCATGAAGTGAACAGGTGGTGCTTATTCATAGTAGGCATGGGTGT TATTACAGTGCTGGTCAACTGGTTGCAACATTTCTATTTTGGAATAATGGGAGAGAAGAT GACCGAGCGCATAAGAAGAATGATGTTCTCTGCAATTCTGCGCAATGAAGTTGGATGGTT TGACAAAGAGGAGAACAGTGCTGATACACTATCCATGCGCTTGGCAAATGATGCTACATT TGTCCGTGCCGCATTCAGTAATCGCCTTTCCATATTCATACAAGACACCGCTGCAGTTTC AGTGGCTCTTCTTATTGGAATGCTGTTGGGATGGCGGGTTGCACTTGTTGCTCTTGCAAC TTTACCTGTTCTTGTCATCTCTGCTATTGCTCAGAAATTGTGGCTTGCTGGCTTCTCAAA AGGAATCCAGGAAATGCATAGAAAGGCCTCACTAGTTCTTGAAGACGCAGTCCGAAACAT TTACACTGTTGTAGCCTTCTGTGCTGGGAACAAGATAATGGAACTATACAGGTTACATCT TTGTAAGATACTGAAGCAGAGTCTATTGCAAGGATTGGCCATAGGTTTTGGCTTTGGATT CTCGCAGTTTCTTCTTTTTGCCTGCAATGCCCTTCTTCTTTGGTACACTGCCATTTCAGT GGACAAGCAGCGACTCACAATTGCCACAGGGTTAAAAGAGTACATTCTCTTTTCATTTGC ATCATTTGCATTGGTGGAGCCTTTTGGACTCGCTCCTTACATTCTTAAAAGGCGGAAGTC TCTCATTTCAGTGTTTCAAATCATTGACCGGGAACCAAAGATTGATCCTGATGATAACAC CGGTTTAAAACCACCTAATGTTTACGGGAGCATTGAATTCAAGAATGTTGATTTCTCTTA TCCAGCTCGTCCTGAAATTCTTGTGCTGAGCAATTTTAATCTTAAAGTGAGTGGTGGACA AACAGTTGCCGTGGTAGGGGTTTCAGGATCGGGGAAGAGCACTATAATTTCTTTAATTGA GAGATTCTATGACCCAGTGACTGGCCAAGTTCTGTTGGATGGCCGAGATATAAAATCATT CAACCTGAGATGGTTGCGAAGTCACATGGGCCTAATTCAGCAAGAGCCAGTTATTTTCTC GACAACGATAAGAGAGAACATTATTTATGCAAGGCACAATGCAACAGAGGCTGAGATGAA GGAAGCTGCGAGGATAGCAAATGCCCACCATTTCATTAGCAGCTTGCCACATGGCTACGA CACTCATGTTGGAATGAGGGGGGTTGACCTTACAGCTGGGCAGAAGCAACGAATTGCAAT TGCTAGGGTGGTTTTGAAGAATGCACCTATTTTGTTGTTAGATGAGGCCAGCTCCGCAAT TGAGTCTGAATCAAGTAGGGTGGTGCAGGAAGCTCTTGACACATTGGTCATGGGGAACAA AACAACCATCCTCATTGCGCACAGGGCAGCGATGATGAAGCATGTGGATAACATTGTCGT CCTAAATGGTGGTAGGATAGTTGAGCAGGGTACACATGACTCTCTGATGGACCTGAATGG TCTCTATGTTAGATTGATGCAACCCCATTTTGGCAAGGGCCTTCGCCAGCATCGGCTAAT GTAATTAGTGTTGAGTTTGTTAGGTGTAAATTATCCTAGCGCGTGATCAAGTTCCTTTTC GCTCTGTTCAGCCAGGGGTCATGGTTCTGTGGCTTACCGTTTTGTCGGAGGAAAAATGTT AGGTGTCGCTGGCGCTGCTCTGAATGAGCGGAATGGTGACCTGGTCTTGACAACAAAATT TTAGTCTGAAGATTCAGATGACTAGCTTTGTTGAAACTCTAGGAACTTATTCTGGAAATA GTTAGCGGGTTTGGAGGGGAACTTATTCTGGAAATAGTTAGCAAGTTTGGAGGGCATTGT AATTGTTGTAATATATGAGTTGCAAACATTCTTTCTGAGGCCTGTGTACTTGATTCCTTT CGCCTCTGTAATGTATTGGTTTGATCGTGC