Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0279600-02
CDS Infomation

cds chromosome:IRGSP-1.0:3:9520046:9521042:-1 gene:Os03g0279600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os03t0279600-01);Conserved hypothetical protein. (Os03t0279600-02)
Sequence

ATGGCTTCGCCGCCGCCGCCGCCGCCGCAGCCACCTAGCCCCTCCGCCGCCACGGCGGGG
GCGGCAGCGGCGCCGGTGGACGCGCTGTTCCTCCAGAACCTGATGAGCCGGGTCCAGCTC
CGCCCGCCCTTCCTCGACACCAACTCCTTCCTCACCCAGGACCTCGACGAGTTCCTCCTC
AACGAGTTCGCCGCGCTGTCGGCCGCCGCGGGGGCCTCCGACGATGACGACGACGGCGAG
GATGGGGAAGGGGAGGGATCCGATGGGGAGGTGGTCTCCGGGGAGGCGAGGCGGCGGCGG
ACGCTGGCGAGGGAGGAGGCCAAGCTGGAGAAGGAGATCGTGCGGCTCGTGCTCGCCGGG
GAGGCGGAGGAGGCGCTCAAGCCCAACTCCGGCCAGTCCGTCGCCGTCGGCGACCACCAC
ATCTGCGTCGGCTTCCACGACGATTCCGGCGGTGTGTACCGCGTCTGGGAGTGGCACGGC
CACGTCATGATCTTCGACGACGAGGATGGCTATTCCGCGGAGTACATCTACGGCAACCAC
TTCGAGCCCCTCGCCGCCGCCACCGCCAGGGCGAAGGAGAAGGAGAGGGAGAAGAGGGAG
AAGGAGCTCAGCTCGGGCCTCCGCGATTTGATCCTGGGCGACACTGGCAGCGGCGCCAAT
GGCTCCAAGGAGAATGGCAAGGGTGGGGCACCCAGGGTGGTGCGCAGGAACGTCGTCAAT
GCCCCTGCGGCGCCTGCGAGGTAA

Peptide Sequence

PEP ID

Os03t0279600-02
PEP Infomation

pep chromosome:IRGSP-1.0:3:9520046:9521042:-1 gene:Os03g0279600 transcript:Os03t0279600-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os03t0279600-01);Conserved hypothetical protein. (Os03t0279600-02)
Sequence

MASPPPPPPQPPSPSAATAGAAAAPVDALFLQNLMSRVQLRPPFLDTNSFLTQDLDEFLL
NEFAALSAAAGASDDDDDGEDGEGEGSDGEVVSGEARRRRTLAREEAKLEKEIVRLVLAG
EAEEALKPNSGQSVAVGDHHICVGFHDDSGGVYRVWEWHGHVMIFDDEDGYSAEYIYGNH
FEPLAAATARAKEKEREKREKELSSGLRDLILGDTGSGANGSKENGKGGAPRVVRRNVVN
APAAPAR

Transcript Sequence

Transcript ID

Os03t0279600-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:9520046:9521042:-1 gene:Os03g0279600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os03t0279600-01);Conserved hypothetical protein. (Os03t0279600-02)
Sequence

CGAGCCCACCCAAAACCCAAAACCCTACTGCGCCCATGGCTTCGCCGCCGCCGCCGCCGC
CGCAGCCACCTAGCCCCTCCGCCGCCACGGCGGGGGCGGCAGCGGCGCCGGTGGACGCGC
TGTTCCTCCAGAACCTGATGAGCCGGGTCCAGCTCCGCCCGCCCTTCCTCGACACCAACT
CCTTCCTCACCCAGGACCTCGACGAGTTCCTCCTCAACGAGTTCGCCGCGCTGTCGGCCG
CCGCGGGGGCCTCCGACGATGACGACGACGGCGAGGATGGGGAAGGGGAGGGATCCGATG
GGGAGGTGGTCTCCGGGGAGGCGAGGCGGCGGCGGACGCTGGCGAGGGAGGAGGCCAAGC
TGGAGAAGGAGATCGTGCGGCTCGTGCTCGCCGGGGAGGCGGAGGAGGCGCTCAAGCCCA
ACTCCGGCCAGTCCGTCGCCGTCGGCGACCACCACATCTGCGTCGGCTTCCACGACGATT
CCGGCGGTGTGTACCGCGTCTGGGAGTGGCACGGCCACGTCATGATCTTCGACGACGAGG
ATGGCTATTCCGCGGAGTACATCTACGGCAACCACTTCGAGCCCCTCGCCGCCGCCACCG
CCAGGGCGAAGGAGAAGGAGAGGGAGAAGAGGGAGAAGGAGCTCAGCTCGGGCCTCCGCG
ATTTGATCCTGGGCGACACTGGCAGCGGCGCCAATGGCTCCAAGGAGAATGGCAAGGGTG
GGGCACCCAGGGTGGTGCGCAGGAACGTCGTCAATGCCCCTGCGGCGCCTGCGAGGTAAT
AAAACTCCTCTTTAGCTCTAGCGCGTGTATTGATGGAAGCGAGGCATCAATCCGAGAAAC
AGAAGCAAAATAATGATTTGATCTTTCCTTTTCTTCTGTAGTTGCCGCTGAGGGCGGTTT
CTTTTGTTCTGATCAGAAATGCTATATACTTTGCTTCTGTTATGATACACAGTGTACCCA
ACTGGGTTTTGAGATGGGAGTATTTGTTCCATATACT