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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0279200-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:9498973:9499826:-1 gene:Os03g0279200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Histone H2A. (Os03t0279200-01)
Sequence

ATGGACGCCGCCGGAGCCGGAGCGGGTGGGAAGTTGAAGAAGGGAGCCGCCGGGAGGAAG
GCCGGCGGGCCGAGGAAGAAGGCGGTGTCGCGCTCCGTCAAGGCCGGGCTCCAGTTCCCC
GTCGGCCGTATCGGCCGCTACCTCAAGAAGGGCCGCTACGCCCAGCGCATCGGCACCGGC
GCCCCCGTCTACCTCGCCGCCGTCCTCGAGTACCTCGCTGCCGAGGTGCTGGAGCTCGCC
GGGAACGCGGCCAGGGACAACAAGAAGAACAGGATCATCCCGCGCCACGTGCTGCTGGCG
ATCAGGAACGACGAGGAGCTCGGCAAGCTGCTGGCCGGCGTGACCATCGCGCACGGAGGC
GTGCTGCCCAACATCAACCCGGTGCTGCTGCCCAAGAAGACGGCGGAGAAGGCCGCCGCC
GCCGGCAAGGAGGCCAAGTCGCCCAAGAAGGCCGCCGGGAAGTCCCCCAAGAAGGCCTAG

Peptide Sequence

PEP ID

Os03t0279200-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:9498973:9499826:-1 gene:Os03g0279200 transcript:Os03t0279200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Histone H2A. (Os03t0279200-01)
Sequence

MDAAGAGAGGKLKKGAAGRKAGGPRKKAVSRSVKAGLQFPVGRIGRYLKKGRYAQRIGTG
APVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGG
VLPNINPVLLPKKTAEKAAAAGKEAKSPKKAAGKSPKKA

Transcript Sequence

Transcript ID

Os03t0279200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:9498973:9499826:-1 gene:Os03g0279200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Histone H2A. (Os03t0279200-01)
Sequence

ATCGCCATATCGCATTCGACTAAAGAAAAGGGAAAAAAAAATCCTCCTCGCCTTCGACAG
CAGCAGCAACCAGCTTAGCTAGGCTAGCCATGGACGCCGCCGGAGCCGGAGCGGGTGGGA
AGTTGAAGAAGGGAGCCGCCGGGAGGAAGGCCGGCGGGCCGAGGAAGAAGGCGGTGTCGC
GCTCCGTCAAGGCCGGGCTCCAGTTCCCCGTCGGCCGTATCGGCCGCTACCTCAAGAAGG
GCCGCTACGCCCAGCGCATCGGCACCGGCGCCCCCGTCTACCTCGCCGCCGTCCTCGAGT
ACCTCGCTGCCGAGGTGCTGGAGCTCGCCGGGAACGCGGCCAGGGACAACAAGAAGAACA
GGATCATCCCGCGCCACGTGCTGCTGGCGATCAGGAACGACGAGGAGCTCGGCAAGCTGC
TGGCCGGCGTGACCATCGCGCACGGAGGCGTGCTGCCCAACATCAACCCGGTGCTGCTGC
CCAAGAAGACGGCGGAGAAGGCCGCCGCCGCCGGCAAGGAGGCCAAGTCGCCCAAGAAGG
CCGCCGGGAAGTCCCCCAAGAAGGCCTAGGCGTCGGCGCCTCGCTTTGCTTGTTTAGCTG
GAGTAGATTGGACGGGATGTGTGTCTGTTAGTAGTCTAATGCTGTTGATTTAATCTATGG
TGGTGTCGTTGAACCTTGTGATCTGTGCTTGTGTCTGTTCAAGAAGATAAATTTAAGAGA
TGTTAAATTTTTCTTCAGAGATGTTTCCATTCT