Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0278800-00
CDS Infomation

cds chromosome:IRGSP-1.0:3:9489475:9490784:-1 gene:Os03g0278800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nucleotide-binding, alpha-beta plait domain containing protein. (Os03t0278800-00)
Sequence

ATGGCGCTCTCCTCCTCGCTGCTCCACCGCCTCCTCCGCGGCTCTACCCCCGTCTCTTCC
TCCTCCGCCGCCGCCTCCTCAATACTCCGCGCCACCTTCTGCTCCTCCTCCTCGTCCGCC
CCCTTGCCCACCGAGTCGCCCCTTTCCTCCGTCTTCGGCGACGGCGCCGAGGTCAGCAAC
GTGCCGCCGCTGACCGCCCCCAAGCTCTTCATCAGCGGCCTTTCAAGGTTAACGACGGAT
GAGAAGCTTAAAAATGCCTTTGCTCCCTTTGGGCAGCTACTTGAAGCAAAAGTCATTACA
GATAGGATTTCTGGAAGATCCAAGGGATTCGGTTTTGTTAGATATGCTACTTTAGAAGAA
GCTGAGAATGCTCGGCAGGAGATGAACGCAAAGTTTCTGGATGGATGGGTTATTTTCGTT
GATCCTGCTAAACCAAGGCAGCAGAAGCCTGCTCCTCGTCCTGACACTGATTCATCACAC
ACTGGCTTCACAACAAACAAAACTGTAGGATGGTGTGGTTAG

Peptide Sequence

PEP ID

Os03t0278800-00
PEP Infomation

pep chromosome:IRGSP-1.0:3:9489475:9490784:-1 gene:Os03g0278800 transcript:Os03t0278800-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nucleotide-binding, alpha-beta plait domain containing protein. (Os03t0278800-00)
Sequence

MALSSSLLHRLLRGSTPVSSSSAAASSILRATFCSSSSSAPLPTESPLSSVFGDGAEVSN
VPPLTAPKLFISGLSRLTTDEKLKNAFAPFGQLLEAKVITDRISGRSKGFGFVRYATLEE
AENARQEMNAKFLDGWVIFVDPAKPRQQKPAPRPDTDSSHTGFTTNKTVGWCG

Transcript Sequence

Transcript ID

Os03t0278800-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:9489475:9490784:-1 gene:Os03g0278800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nucleotide-binding, alpha-beta plait domain containing protein. (Os03t0278800-00)
Sequence

ACCGCACCAGAGCCAAGGCGGAGGTAGGGTTTTAGCCGGCGGCCATGGCGCTCTCCTCCT
CGCTGCTCCACCGCCTCCTCCGCGGCTCTACCCCCGTCTCTTCCTCCTCCGCCGCCGCCT
CCTCAATACTCCGCGCCACCTTCTGCTCCTCCTCCTCGTCCGCCCCCTTGCCCACCGAGT
CGCCCCTTTCCTCCGTCTTCGGCGACGGCGCCGAGGTCAGCAACGTGCCGCCGCTGACCG
CCCCCAAGCTCTTCATCAGCGGCCTTTCAAGGTTAACGACGGATGAGAAGCTTAAAAATG
CCTTTGCTCCCTTTGGGCAGCTACTTGAAGCAAAAGTCATTACAGATAGGATTTCTGGAA
GATCCAAGGGATTCGGTTTTGTTAGATATGCTACTTTAGAAGAAGCTGAGAATGCTCGGC
AGGAGATGAACGCAAAGTTTCTGGATGGATGGGTTATTTTCGTTGATCCTGCTAAACCAA
GGCAGCAGAAGCCTGCTCCTCGTCCTGACACTGATTCATCACACACTGGCTTCACAACAA
ACAAAACTGTAGGATGGTGTGGTTAGTCACTGTGGTGTTATAGCTAAAAAACTTGGATAC
ACATGTTTCCATGCCTCATTACATTCCACAGTTGTCTACATGTCTCATAATATTCTGTAG
TTGTCTGATAGATATGTCATTCACATGGATTATAAGATGTTCATGATCATTGTTCTAAAT
ATTGAACACC