Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0277100-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:9404128:9405129:1 gene:Os03g0277100 gene_biotype:protein_coding transcript_biotype:protein_coding description:HSP20-like chaperone domain containing protein. (Os03t0277100-01)
Sequence

TCATGGAGAAATCTTCCTAGCACAGATTTTGAGCTTGAGAGGCCAGCAACTACTGCTGCC
ACGAAGACTAGCTCACATGGCCATCACAAGAAGTTGCTCAACGGTTCTGGCCTTAACCTG
TCAACACAGCCATCGAATCACAGCTCTGGGGATGGTCTGGACATCCCAAATATTTGCAAC
AAGCGCCGGAAGGATTCCTCCCCCACAGCGATGGAAGAAGATTGCAGCAATTCAAATTCA
GACAAGGTCCAGGACATGGAAGTGAGCCACACGTTCGAGCCGTCATGGATGAATGACTTC
ACTGGTGTGATGCGCCATGCTTCTGGTCCAGTGACTGCAGCAAAAACAATCTATGAAGAT
AGCAAGGGGTACTTGATCATCATTAGCCTACCGTTTGCTGATATACAAAGGGTGAAGGTT
TCATGGAAGAATACTCTTACAAATGGGATAGTTAAGGTATCATGCACTAGTGTTGGCCGG
ATGCCATTCTTGAAGAGACATGACCGGACCTTCAAGTTAGTCGATCCTACACCTGAGCAT
TGTCCACCAGGAGAGTTTATTCGGGAAATTCCACTCCCTACTCGGATCCCGGAAGATGCT
ACTTTAGAAGCATACTGTGATGAATCAGGAACAGGCCTAGAGATTATTGTTCCAAAATAC
CGTGTTGGTCCTGAAGAACATGAAGTTCATGTGTCCATGAGGCCCCCCTCGTCATGGTGC
CAGTCTTAA

Peptide Sequence

PEP ID

Os03t0277100-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:9404128:9405129:1 gene:Os03g0277100 transcript:Os03t0277100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:HSP20-like chaperone domain containing protein. (Os03t0277100-01)
Sequence

SWRNLPSTDFELERPATTAATKTSSHGHHKKLLNGSGLNLSTQPSNHSSGDGLDIPNICN
KRRKDSSPTAMEEDCSNSNSDKVQDMEVSHTFEPSWMNDFTGVMRHASGPVTAAKTIYED
SKGYLIIISLPFADIQRVKVSWKNTLTNGIVKVSCTSVGRMPFLKRHDRTFKLVDPTPEH
CPPGEFIREIPLPTRIPEDATLEAYCDESGTGLEIIVPKYRVGPEEHEVHVSMRPPSSWC
QS

Transcript Sequence

Transcript ID

Os03t0277100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:9404128:9405129:1 gene:Os03g0277100 gene_biotype:protein_coding transcript_biotype:protein_coding description:HSP20-like chaperone domain containing protein. (Os03t0277100-01)
Sequence

GTCATGGAGAAATCTTCCTAGCACAGATTTTGAGCTTGAGAGGCCAGCAACTACTGCTGC
CACGAAGACTAGCTCACATGGCCATCACAAGAAGTTGCTCAACGGTTCTGGCCTTAACCT
GTCAACACAGCCATCGAATCACAGCTCTGGGGATGGTCTGGACATCCCAAATATTTGCAA
CAAGCGCCGGAAGGATTCCTCCCCCACAGCGATGGAAGAAGATTGCAGCAATTCAAATTC
AGACAAGGTCCAGGACATGGAAGTGAGCCACACGTTCGAGCCGTCATGGATGAATGACTT
CACTGGTGTGATGCGCCATGCTTCTGGTCCAGTGACTGCAGCAAAAACAATCTATGAAGA
TAGCAAGGGGTACTTGATCATCATTAGCCTACCGTTTGCTGATATACAAAGGGTGAAGGT
TTCATGGAAGAATACTCTTACAAATGGGATAGTTAAGGTATCATGCACTAGTGTTGGCCG
GATGCCATTCTTGAAGAGACATGACCGGACCTTCAAGTTAGTCGATCCTACACCTGAGCA
TTGTCCACCAGGAGAGTTTATTCGGGAAATTCCACTCCCTACTCGGATCCCGGAAGATGC
TACTTTAGAAGCATACTGTGATGAATCAGGAACAGGCCTAGAGATTATTGTTCCAAAATA
CCGTGTTGGTCCTGAAGAACATGAAGTTCATGTGTCCATGAGGCCCCCCTCGTCATGGTG
CCAGTCTTAACATGTTCAAGGTGTGTGGTGCATGCCCTTGTAGCTGGTAGAAATCGATTA
TTGTCAACTTCTGTTGACTGATGTTTTGCTGTCTGCTAACCCTCAGCTCGCAAGGAGACG
TTCAGAGACATAGCATACAAGAAAATTGCTCTCATTTTTGCTAATTGGAAAGGGAAAGGG
AAACAATCGTAATTGATTGAAGCATTCTGGTATTTGGCATTTGAAACATTTGTAGGACCA
TGCTACATATCACAAGGAACATATCTGGATTAATTCGATCTT