Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0276500-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:9370160:9373067:1 gene:Os03g0276500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:71.1 KDA CLASS I HEAT SHOCK PROTEIN description:Similar to Heat shock protein 70. (Os03t0276500-01)
Sequence	ATGGCCGGCAAGGGAGACGGGCCGGCGATCGGCATCGACCTCGGGACGACCTACTCGTGC GTCGGCGTGTGGCAGCACGACCGCGTCGAGATCATCGCCAACGACCAGGGGAACCGCACC ACGCCGTCGTATGTCGCGTTCACCGACTCCGAGAGGCTCATCGGCGACGCCGCCAAGAAC CAGGTCGCCATGAACCCCATCAACACCGTCTTCGATGCGAAGCGTCTCATCGGCCGGCGT TTCTCTGACACGTCGGTGCAGAGCGACGCGAAGCTGTGGCCGTTCAAGGTGCTACCCGGC CCCGGCGACAAGCCGATGATCGGCGTGCAGTACAAGGGAGAGGAGAAGCAGTTCTCCGCC GAGGAGATCTCGTCCATGGTGCTCAACAAGATGAAGGAGACGGCCGAGGCCTATCTCGGA AGCACCGTCAAGAACGCCGTCGTCACCGTCCCGGCCTACTTCAACGACTCCCAGCGCCAG GCCACCAAGGACGCCGGCGTCATCTCCGGCCTCAACGTCATGCGCATCATCAACGAGCCC ACCGCCGCCGCCATCGCCTACGGCCTCGACAAGAAGTCGAGCAGCGTCGGCGAGAAGAAC GTGCTCATCTTTGACCTCGGCGGCGGCACATTCGATGTCTCCCTCCTCACCATCGAGGAG GGCATCTTCGAGGTGAAGGCCACCGCCGGTGACACCCACCTTGGAGGCGAGGACTTCGAC AACCGGATGGTGAACCACTTCGTGCAGGAATTCAAGAGGAAGAACAAGAAGGACATCACG GGCAACCCGAGGGCGCTCAGGCGTCTGAGGACGGCGTGCGAGAGGGCGAAGAGGACGCTG TCCTCCACCGCCCAGACCACCATCGAGATCGACTCCCTCTACGAGGGCATCGACTTCTAC ACCACCATCACCCGCGCCAGGTTCGAGGAGCTCAACATGGACCTCTTCCGCAAGTGCATG GAGCCCGTGGAGAAGTGCCTCCGCGACGCCAAGATGGACAAGAGCACCGTCCACGACGTC GTGCTCGTCGGAGGCTCCACCCGTATCCCCCGCGTGCAGCAGCTGCTCCAGGACTTCTTC AACGGGAAGGAGCTCTGCAAGAGCATCAACCCCGACGAGGCCGTCGCGTACGGCGCCGCC GTGCAGGCCGCCATCCTCACCGGCGAGGGCAACGAGAAGGTCCAGGACCTGCTCCTCCTC GACGTCACGCCGCTGTCTCAGGGCCTCGAGACGGCCGGAGGCGTCATGACCGTGCTGATC CCCAGGAACACCACCATCCCCACCAAGAAGGAGCAGGTCTTCTCCACCTACTCCGACAAC CAGCCCGGCGTGCTCATCCAGGTGTACGAGGGTGAGAGGACGCGGACCAAGGACAACAAC CTGCTCGGCAAGTTCGAGCTCTCCGGCATTCCGCCGGCGCCCAGGGGTGTCCCCCAGATC ACCGTGTGCTTCGACATTGACGCGAACGGCATCCTGAACGTCTCGGCGGAGGACAAGACC ACCGGGCAGAAGAACAAGATCACCATCACCAACGACAAGGGCCGTCTGAGCAAGGAGGAT ATCGAGAAGATGGTGCAGGAGGCGGAGAAGTACAAGGCGGAGGACGAGGAGCACAAGAAG AAGGTCGACGCCAAGAACTCGCTCGAGAACTACGCCTACAACATGCGGAACACCATCAAG GACGACAAGATCGCGTCCAAGCTGCCGGAGGCCGACAAGAAGAAGATCGAGGACGCCATC GACGGTGCCATCAGCTGGCTCGACAGCAACCAGCTCGCCGAGGCCGAGGAGTTCGAGGAC AAGATGAAGGAGCTGGAGGGCGTCTGCAACCCCATCATCGCCAAGATGTACCAGGGCGCC GGAGCTGACATGGCCGGAGGCATGGACGAGGATGCTCCGGCGGCCGCCGGCGGAAGCAGC GGACCAGGGCCCAAGATCGAGGAAGTCGACTAA

Peptide Sequence

PEP ID	Os03t0276500-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:9370160:9373067:1 gene:Os03g0276500 transcript:Os03t0276500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:71.1 KDA CLASS I HEAT SHOCK PROTEIN description:Similar to Heat shock protein 70. (Os03t0276500-01)
Sequence	MAGKGDGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKN QVAMNPINTVFDAKRLIGRRFSDTSVQSDAKLWPFKVLPGPGDKPMIGVQYKGEEKQFSA EEISSMVLNKMKETAEAYLGSTVKNAVVTVPAYFNDSQRQATKDAGVISGLNVMRIINEP TAAAIAYGLDKKSSSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFD NRMVNHFVQEFKRKNKKDITGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFY TTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPRVQQLLQDFF NGKELCKSINPDEAVAYGAAVQAAILTGEGNEKVQDLLLLDVTPLSQGLETAGGVMTVLI PRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTKDNNLLGKFELSGIPPAPRGVPQI TVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEDIEKMVQEAEKYKAEDEEHKK KVDAKNSLENYAYNMRNTIKDDKIASKLPEADKKKIEDAIDGAISWLDSNQLAEAEEFED KMKELEGVCNPIIAKMYQGAGADMAGGMDEDAPAAAGGSSGPGPKIEEVD

Transcript Sequence

Transcript ID	Os03t0276500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:9370160:9373067:1 gene:Os03g0276500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:71.1 KDA CLASS I HEAT SHOCK PROTEIN description:Similar to Heat shock protein 70. (Os03t0276500-01)
Sequence	ACTCACAAATCGATCTCTCTCCTGCCATCTTCAGATCGCATCGATTTTCTCCTTTTCGAG TTTTTTTCCCCTTCGCTTGAGAGCTTTCGACGAGAGCGAGGGAGAGGGAGATCATGGCCG GCAAGGGAGACGGGCCGGCGATCGGCATCGACCTCGGGACGACCTACTCGTGCGTCGGCG TGTGGCAGCACGACCGCGTCGAGATCATCGCCAACGACCAGGGGAACCGCACCACGCCGT CGTATGTCGCGTTCACCGACTCCGAGAGGCTCATCGGCGACGCCGCCAAGAACCAGGTCG CCATGAACCCCATCAACACCGTCTTCGATGCGAAGCGTCTCATCGGCCGGCGTTTCTCTG ACACGTCGGTGCAGAGCGACGCGAAGCTGTGGCCGTTCAAGGTGCTACCCGGCCCCGGCG ACAAGCCGATGATCGGCGTGCAGTACAAGGGAGAGGAGAAGCAGTTCTCCGCCGAGGAGA TCTCGTCCATGGTGCTCAACAAGATGAAGGAGACGGCCGAGGCCTATCTCGGAAGCACCG TCAAGAACGCCGTCGTCACCGTCCCGGCCTACTTCAACGACTCCCAGCGCCAGGCCACCA AGGACGCCGGCGTCATCTCCGGCCTCAACGTCATGCGCATCATCAACGAGCCCACCGCCG CCGCCATCGCCTACGGCCTCGACAAGAAGTCGAGCAGCGTCGGCGAGAAGAACGTGCTCA TCTTTGACCTCGGCGGCGGCACATTCGATGTCTCCCTCCTCACCATCGAGGAGGGCATCT TCGAGGTGAAGGCCACCGCCGGTGACACCCACCTTGGAGGCGAGGACTTCGACAACCGGA TGGTGAACCACTTCGTGCAGGAATTCAAGAGGAAGAACAAGAAGGACATCACGGGCAACC CGAGGGCGCTCAGGCGTCTGAGGACGGCGTGCGAGAGGGCGAAGAGGACGCTGTCCTCCA CCGCCCAGACCACCATCGAGATCGACTCCCTCTACGAGGGCATCGACTTCTACACCACCA TCACCCGCGCCAGGTTCGAGGAGCTCAACATGGACCTCTTCCGCAAGTGCATGGAGCCCG TGGAGAAGTGCCTCCGCGACGCCAAGATGGACAAGAGCACCGTCCACGACGTCGTGCTCG TCGGAGGCTCCACCCGTATCCCCCGCGTGCAGCAGCTGCTCCAGGACTTCTTCAACGGGA AGGAGCTCTGCAAGAGCATCAACCCCGACGAGGCCGTCGCGTACGGCGCCGCCGTGCAGG CCGCCATCCTCACCGGCGAGGGCAACGAGAAGGTCCAGGACCTGCTCCTCCTCGACGTCA CGCCGCTGTCTCAGGGCCTCGAGACGGCCGGAGGCGTCATGACCGTGCTGATCCCCAGGA ACACCACCATCCCCACCAAGAAGGAGCAGGTCTTCTCCACCTACTCCGACAACCAGCCCG GCGTGCTCATCCAGGTGTACGAGGGTGAGAGGACGCGGACCAAGGACAACAACCTGCTCG GCAAGTTCGAGCTCTCCGGCATTCCGCCGGCGCCCAGGGGTGTCCCCCAGATCACCGTGT GCTTCGACATTGACGCGAACGGCATCCTGAACGTCTCGGCGGAGGACAAGACCACCGGGC AGAAGAACAAGATCACCATCACCAACGACAAGGGCCGTCTGAGCAAGGAGGATATCGAGA AGATGGTGCAGGAGGCGGAGAAGTACAAGGCGGAGGACGAGGAGCACAAGAAGAAGGTCG ACGCCAAGAACTCGCTCGAGAACTACGCCTACAACATGCGGAACACCATCAAGGACGACA AGATCGCGTCCAAGCTGCCGGAGGCCGACAAGAAGAAGATCGAGGACGCCATCGACGGTG CCATCAGCTGGCTCGACAGCAACCAGCTCGCCGAGGCCGAGGAGTTCGAGGACAAGATGA AGGAGCTGGAGGGCGTCTGCAACCCCATCATCGCCAAGATGTACCAGGGCGCCGGAGCTG ACATGGCCGGAGGCATGGACGAGGATGCTCCGGCGGCCGCCGGCGGAAGCAGCGGACCAG GGCCCAAGATCGAGGAAGTCGACTAAATGATCGATCTTTTATCGCTTTTAGTTATACCTG CAATAATTTGTCGTTCGTTTTACACCGAATTCTTGAGTGCTCCTGCAACTTTTTTGGTAC GGGCTTTCATTATGGCCCCGGTTTTGCTTTACTTGTTAAAGTTTGGATTATTATGGTTTT ATTAATATAGTATTGAGTAGCAATTTATACC