Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0275300-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:9296962:9300002:-1 gene:Os03g0275300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os03t0275300-01)
Sequence

ATGGGGCAGGGCGCCAGCTGCGGGCGGCCCAGCGAGGAGGTGGACTTCTTCGGCGCGGCG
CAGTCGGGCGACCTCGCCCGCCTCGCCGCCGCCGTCCGCTCCCGCCCTTCCCTCCTCGGC
CGCACCACGCTCTTCGACCGCCTCTCCGCCCTCCACATCGCCGCCGCCCACGGCCACCTC
CAGGTGGTGTCCATGGCGTTGGATCTTTGCGTGCACCCGGACGTCGTTAACCGCCACAAG
CAGACGGCGCTGATGCTCGCGGCGATGCACGGGAGGACCGAGTGCGTGCGGCGGCTGCTC
GACGCCGGCGCCAATATTGTGATGTTCGATTCGTCGCACGGGCGGACGTGCCTGCACTAC
GCGGCGTACTACGGCCACGCCGACTGCCTACGGGCCATCCTCTCGGCGGCGCAGTCGGCG
CCGGTGTCGCAATCCTGGGGTTTCGCGCGGTTCGTGAACGTGAGGGACGACACCGGAGCG
ACGCCGCTGCACCTCGCGGCGAGGCAGGGCTGGCGGCGCTGCGTCCACGTCCTGCTCGAG
AACGGCGCCATCGTGTCAGCCTCCAGTAGCGCCTTTGGATTCCCCGGGAGCACGCCGCTG
CATTTGGCCGCGCGCGGCGGCAGCCTCGACTGCGTCCGCCAGCTCCTCTCCTGGGGCGCC
GACCGCCTCCAGCGAGACTCCGTCGGGAGGATTCCGTACGAGGTGGCGATGAAGCGAGGG
CACGTCGCGTGCGCCGCGCTGCTGAACCCGTCGTCGGCGGAGCCCCTGGTGTGGCCGTCC
CCGCTCAAGTTCATCAGCGAGCTCGAGCCGGACGCCAAAGCCCTCCTGGAGGCGGCGCTC
ATGGAGGCCAACCGGGAGAGGGAGAAGAGGACCCTGAAAGGGGCCAGGAGCGCGTCGCCG
TTGGCGTTGCCATCGCCGTCGCGTTCAGACGACGGCGCGCACGACGCCGCCATCTCTGAG
GAGGCGGCGGCGGCCGGCGGCGGCGAGGTGTGCAGCATCTGCTTCGAGCAGGCGTGCACG
ATCGAGGTGCGGGAGTGTGGGCACCAGATGTGCGCGGCGTGCACGCTGGCGCTGTGCTGC
CACGCGAAGCCCAGCGCGGCGGCGGCGACGCCGTGCCAGCAGCCGCTGCCGACCTGCCCG
TTCTGCCGCGGCGGCATCTCCCGGCTGGTGGTGGCGACGACCAAGACCAGAGCAGGCGGC
GACGACGAGGAGGACGACGAGGAGGCGGGCAGCAGGCTGGCGTCGCCGCTGCACAGGAGG
TCTCGCCGGGCGGTGAACCACCCCAGCGGCGACGGCGGCAGCACCAGCAGCATCATGGGC
AGCATTGCGTCGTCGATCGGGAAGATGGGCAGACGGCGAACCGACAGCAGCGAACACGTC
GACGTCGACAAGCCCTAG

Peptide Sequence

PEP ID

Os03t0275300-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:9296962:9300002:-1 gene:Os03g0275300 transcript:Os03t0275300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os03t0275300-01)
Sequence

MGQGASCGRPSEEVDFFGAAQSGDLARLAAAVRSRPSLLGRTTLFDRLSALHIAAAHGHL
QVVSMALDLCVHPDVVNRHKQTALMLAAMHGRTECVRRLLDAGANIVMFDSSHGRTCLHY
AAYYGHADCLRAILSAAQSAPVSQSWGFARFVNVRDDTGATPLHLAARQGWRRCVHVLLE
NGAIVSASSSAFGFPGSTPLHLAARGGSLDCVRQLLSWGADRLQRDSVGRIPYEVAMKRG
HVACAALLNPSSAEPLVWPSPLKFISELEPDAKALLEAALMEANREREKRTLKGARSASP
LALPSPSRSDDGAHDAAISEEAAAAGGGEVCSICFEQACTIEVRECGHQMCAACTLALCC
HAKPSAAAATPCQQPLPTCPFCRGGISRLVVATTKTRAGGDDEEDDEEAGSRLASPLHRR
SRRAVNHPSGDGGSTSSIMGSIASSIGKMGRRRTDSSEHVDVDKP

Transcript Sequence

Transcript ID

Os03t0275300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:9296962:9300002:-1 gene:Os03g0275300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os03t0275300-01)
Sequence

AAGCTCCCCCCTCTCCCCTTTCGCCGTCGCGGTCTACTCCACCCACACATCCCCCCCCCC
CCCGCGCCCCGCCGCCGAGCTCGCCGGGCGGCCGGCGAGAGGGCGTGCGCGGCGATGGGG
CAGGGCGCCAGCTGCGGGCGGCCCAGCGAGGAGGTGGACTTCTTCGGCGCGGCGCAGTCG
GGCGACCTCGCCCGCCTCGCCGCCGCCGTCCGCTCCCGCCCTTCCCTCCTCGGCCGCACC
ACGCTCTTCGACCGCCTCTCCGCCCTCCACATCGCCGCCGCCCACGGCCACCTCCAGGTG
GTGTCCATGGCGTTGGATCTTTGCGTGCACCCGGACGTCGTTAACCGCCACAAGCAGACG
GCGCTGATGCTCGCGGCGATGCACGGGAGGACCGAGTGCGTGCGGCGGCTGCTCGACGCC
GGCGCCAATATTGTGATGTTCGATTCGTCGCACGGGCGGACGTGCCTGCACTACGCGGCG
TACTACGGCCACGCCGACTGCCTACGGGCCATCCTCTCGGCGGCGCAGTCGGCGCCGGTG
TCGCAATCCTGGGGTTTCGCGCGGTTCGTGAACGTGAGGGACGACACCGGAGCGACGCCG
CTGCACCTCGCGGCGAGGCAGGGCTGGCGGCGCTGCGTCCACGTCCTGCTCGAGAACGGC
GCCATCGTGTCAGCCTCCAGTAGCGCCTTTGGATTCCCCGGGAGCACGCCGCTGCATTTG
GCCGCGCGCGGCGGCAGCCTCGACTGCGTCCGCCAGCTCCTCTCCTGGGGCGCCGACCGC
CTCCAGCGAGACTCCGTCGGGAGGATTCCGTACGAGGTGGCGATGAAGCGAGGGCACGTC
GCGTGCGCCGCGCTGCTGAACCCGTCGTCGGCGGAGCCCCTGGTGTGGCCGTCCCCGCTC
AAGTTCATCAGCGAGCTCGAGCCGGACGCCAAAGCCCTCCTGGAGGCGGCGCTCATGGAG
GCCAACCGGGAGAGGGAGAAGAGGACCCTGAAAGGGGCCAGGAGCGCGTCGCCGTTGGCG
TTGCCATCGCCGTCGCGTTCAGACGACGGCGCGCACGACGCCGCCATCTCTGAGGAGGCG
GCGGCGGCCGGCGGCGGCGAGGTGTGCAGCATCTGCTTCGAGCAGGCGTGCACGATCGAG
GTGCGGGAGTGTGGGCACCAGATGTGCGCGGCGTGCACGCTGGCGCTGTGCTGCCACGCG
AAGCCCAGCGCGGCGGCGGCGACGCCGTGCCAGCAGCCGCTGCCGACCTGCCCGTTCTGC
CGCGGCGGCATCTCCCGGCTGGTGGTGGCGACGACCAAGACCAGAGCAGGCGGCGACGAC
GAGGAGGACGACGAGGAGGCGGGCAGCAGGCTGGCGTCGCCGCTGCACAGGAGGTCTCGC
CGGGCGGTGAACCACCCCAGCGGCGACGGCGGCAGCACCAGCAGCATCATGGGCAGCATT
GCGTCGTCGATCGGGAAGATGGGCAGACGGCGAACCGACAGCAGCGAACACGTCGACGTC
GACAAGCCCTAGCACGCAACTCATCGGATCGAGTCAGAGTGGACACGATCATCCTGGTAC
AAGCCATTGTCGTCGTCGTCGTAGTCTTCTTCAACCGATCGGCAAATGAGCTACTATTTT
TTGTAGATTATTACTATTATTTTTTCCTCAAGAAAATGAGCTATTCCATCTGTGTAGATT
TGAGCCATGCTGTATTACGCTGTGTAAATCCAAATAAGCAGTCCTTGCATGCTTGGTAGC
C