Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0273800-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:9202541:9204642:1 gene:Os03g0273800 gene_biotype:protein_coding transcript_biotype:protein_coding description:HAD-superfamily hydrolase, subfamily IA, variant 3 domain containing protein. (Os03t0273800-01)
Sequence

ATGGAGTTCGAAGACCGCTGCCACAAGGTCCAGGAGCCCAAATTCGACTGCCTGCTGTTT
GACCTCGATGACACTCTGTACCCACTGAGCTCGGGGATCGCGTCCCATGTCAAGAAGAAC
ATTGGAGATTACATGGTTGAGAAGCTGGGTATTGAGGAGAGCAAGATTGAGAACCTTGGC
AATCTGCTGTACAAGAACTACGGCACGACGATGGCCGGACTCAGGGCAATAGGCTACAGC
TTCGATTACGATGAGTACCACAGTTTTGTCCATGGAAGACTGCCCTACGAGAACATCAAG
CCGGACCCTGTCCTGAAGCACATTCTCAAGAACCTGCGCATCCGCAAACTCATATTCACC
AACGGCGACAAGGACCACGCCGTGAGAGCCCTCAAGAGGCTGGGGCTGGAGGACTGCTTC
GAGGGGATCATCTGCTTCGAGACCCTCAACCCGCCGTGCCCGTCGCCGCCGTGCGACGGG
GAGGCCAGCATCTTCGACATCGCCGGACACTTCTCCATGCCCGGCGCCGCCGCCGACGAG
CTTCCCAGGACACCCGTCCTCTGCAAGCCCAACGTCGACGCCATGGAGGAGGCCCTCAGG
ATCGCCAACGTGAACCCTCACAAGGCGATTTTCTTCGACGACAGCGTGAGGAACATCCAG
GCGGGGAAGAGGATCGGGCTCCACACGGTGCTGGTGGGCACGCCGCAGCGGGTGAAGGGC
GCGGACCACGCGCTGGAGAGCATCCACAACATCAGGGAGGCGCTGCCGGAGCTGTGGGAG
GAGGCCGAGAAGGCGGAGGACGTGCTCATCTACTCCGACCGCGTCGCCATCGAGACATCG
GTGACCGCGTAG

Peptide Sequence

PEP ID

Os03t0273800-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:9202541:9204642:1 gene:Os03g0273800 transcript:Os03t0273800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:HAD-superfamily hydrolase, subfamily IA, variant 3 domain containing protein. (Os03t0273800-01)
Sequence

MEFEDRCHKVQEPKFDCLLFDLDDTLYPLSSGIASHVKKNIGDYMVEKLGIEESKIENLG
NLLYKNYGTTMAGLRAIGYSFDYDEYHSFVHGRLPYENIKPDPVLKHILKNLRIRKLIFT
NGDKDHAVRALKRLGLEDCFEGIICFETLNPPCPSPPCDGEASIFDIAGHFSMPGAAADE
LPRTPVLCKPNVDAMEEALRIANVNPHKAIFFDDSVRNIQAGKRIGLHTVLVGTPQRVKG
ADHALESIHNIREALPELWEEAEKAEDVLIYSDRVAIETSVTA

Transcript Sequence

Transcript ID

Os03t0273800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:9202541:9204642:1 gene:Os03g0273800 gene_biotype:protein_coding transcript_biotype:protein_coding description:HAD-superfamily hydrolase, subfamily IA, variant 3 domain containing protein. (Os03t0273800-01)
Sequence

TCCCCCCTCCGCCTCGCACTCTCTCTCGCTATAGCCTATAGCGTCTCTCCCGAAGGCTCG
AGACACCACACCTCTCTTCTCTTTGGCTCCTCTCCTCGCTGCATTGCGATCCCAAGAGCT
GTGAGCTTTAGGAGCTTGTTCATCACGACCTGAAAATCATGGAGTTCGAAGACCGCTGCC
ACAAGGTCCAGGAGCCCAAATTCGACTGCCTGCTGTTTGACCTCGATGACACTCTGTACC
CACTGAGCTCGGGGATCGCGTCCCATGTCAAGAAGAACATTGGAGATTACATGGTTGAGA
AGCTGGGTATTGAGGAGAGCAAGATTGAGAACCTTGGCAATCTGCTGTACAAGAACTACG
GCACGACGATGGCCGGACTCAGGGCAATAGGCTACAGCTTCGATTACGATGAGTACCACA
GTTTTGTCCATGGAAGACTGCCCTACGAGAACATCAAGCCGGACCCTGTCCTGAAGCACA
TTCTCAAGAACCTGCGCATCCGCAAACTCATATTCACCAACGGCGACAAGGACCACGCCG
TGAGAGCCCTCAAGAGGCTGGGGCTGGAGGACTGCTTCGAGGGGATCATCTGCTTCGAGA
CCCTCAACCCGCCGTGCCCGTCGCCGCCGTGCGACGGGGAGGCCAGCATCTTCGACATCG
CCGGACACTTCTCCATGCCCGGCGCCGCCGCCGACGAGCTTCCCAGGACACCCGTCCTCT
GCAAGCCCAACGTCGACGCCATGGAGGAGGCCCTCAGGATCGCCAACGTGAACCCTCACA
AGGCGATTTTCTTCGACGACAGCGTGAGGAACATCCAGGCGGGGAAGAGGATCGGGCTCC
ACACGGTGCTGGTGGGCACGCCGCAGCGGGTGAAGGGCGCGGACCACGCGCTGGAGAGCA
TCCACAACATCAGGGAGGCGCTGCCGGAGCTGTGGGAGGAGGCCGAGAAGGCGGAGGACG
TGCTCATCTACTCCGACCGCGTCGCCATCGAGACATCGGTGACCGCGTAGGCCACACCTA
CTGTCTCTCCCGACTCCGGCGAATCGCTCAGAACGAGCAACCATCCATCCATCCATGTCC
ATCCCTGGCCGGGCAGGTGATCATCAGGTGGGAATTCAGAATTGGCCGGGACAACAATAC
GTTCCAAGAAAAAAAGAGGAGGGTGTTCCGTGGAAGTTCAGGATTCAGAATGTAACAGCA
ATGTTGGAACGGGTCCTGTAGTATATATATGTATCGGTCAGATCTTTGCATGTAAATTAG
TACTCCTAGAAGCAATAATAATAATAATTAATAAAGAGAATG