Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0273200-02
CDS Infomation	cds chromosome:IRGSP-1.0:3:9167743:9170251:-1 gene:Os03g0273200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LACCASE 11 description:Similar to Laccase (EC 1.10.3.2). (Os03t0273200-01);Similar to Laccase (EC 1.10.3.2). (Os03t0273200-02)
Sequence	ATGGGAGCACGCTGCCTCGCATTGCTTCTCCTCTATGGCACGTTGCTGCTGCTGTTGCTG CTGCCACAGCTGCCGCTCGCCGGCGCGGCGACGAGATACTACACCTTCAATGTGAAGCTT CAGAATGTGACACGGCTGTGCAACACCCGGGCAATCCCGACGGTGAACGGCAAGTTCCCC GGGCCGAAAATAGTCACCAGGGAGGGAGACCGCGTCGTCGTCAAGGTGGTCAACAATATC AAGGACAACATTACCATCCACTGGCACGGGGTGAGGCAGATGCGGACGGGGTGGTCGGAC GGGCCGGCGTACGTGACGCAGTGCCCGATCCAGACGGGGCAGAGCTACGTGTACAACTTC ACCATCAACGGGCAGAGGGGCACCCTGTTCTGGCACGCGCACGTCTCCTGGCTGCGATCC ACGCTGTACGGCCCCATCATCATCCTCCCCAAGGCCGGCCTCCCGTTGCCCTTCACCGAG CCGCACAAGGACGTGCCCATCATCTTCGGAGAGTGGTTTAACGCGGACCCTGAGGCGATC GTCGCGCAGGCGCTTCAGACCGGCGGTGGGCCCAACGTCTCCGACGCCTACACCATCAAC GGGCTTCCCGGCCCATTGTACAACTGCTCAAGCAAAGACACGTTTAGGCTCAAGGTGCAG CCCGGAAAGATGTACCTGCTCCGGCTGATCAACGCTGCGCTCAACGACGAGCTCTTCTTC TCGGTGGCCAACCACACGCTCACCGTCGTCGACGTGGACGCCTCCTACGTCAAGCCGTTC GACACGGACGTGGTCCTCATCACGCCGGGGCAGACCACCAACGTGCTGCTCCGCGCCAAG CCGACGGCCGAGGCCGCCGGCGCCACGCACCTCATGATGGCGCGCCCCTACGCCACGGGC CGCCCCGGCACCTACGACAACACCACCGTTGCCGCCGTCCTGGAGTACGCGCCACCGGGG CACATCAAGAGCCTCCCGCTCCTCCGCCCGTCGCTGCCGGCGCTCAACGACACGGCCTTC GCCGCCGGCTTCGCCGCCAAGCTCCGCAGCCTGGCCTGCCCGGACTACCCGTCCAACGTG CCGCGCCGCGTCGACAAGCCCTTCTTCTTCGCCGTGGGGCTCGGCACCACCCCGTGCCCG GGCAGCAACAACCAGACGTGCCAGGGCCCCACCAACACCACCAAGTTCACGGCGTCCATC AACAACGTCTCCTTCGACATGCCCACCACCGCGCTCCTGCAGGCGCACTACACCGGCCAG TCCGCCGGCGTGTACACCGCCGACTTCCCCGCCTCGCCGCTGGAGCCGTTCAACTACACG GGCACGCCGCCCAACAACACCAACGTGTCGAACGGGACCAGGGTGGTGGTGCTGCCGTAC AACGCGAGCGTGGAGGTGGTGCTGCAGGACACCAGCATCCTGGGCGCCGAGAGCCACCCG CTGCACCTCCACGGCTTCGACTTCTTCGTCGTCGGGCAGGGCACCGGCAACTACGACCCG TCCAAGCACCCGGCGGAGTTCAACCTGGTCGACCCGGTGCAGAGGAACACCGTCGGCGTG CCGGCCGGCGGCTGGGTCGCCATCAGGTTCTTCGCGGATAACCCTGGTGTCTGGTTCATG CATTGCCACCTGGAGGTTCACACAACCTGGGGGTTGAAGATGGCATGGGTGGTCAACGAC GGCCCGTTGCCTGAGCAGAAGCTGATGCCTCCGCCGTCCGATCTTCCCATGTGCTAG

Peptide Sequence

PEP ID	Os03t0273200-02
PEP Infomation	pep chromosome:IRGSP-1.0:3:9167743:9170251:-1 gene:Os03g0273200 transcript:Os03t0273200-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LACCASE 11 description:Similar to Laccase (EC 1.10.3.2). (Os03t0273200-01);Similar to Laccase (EC 1.10.3.2). (Os03t0273200-02)
Sequence	MGARCLALLLLYGTLLLLLLLPQLPLAGAATRYYTFNVKLQNVTRLCNTRAIPTVNGKFP GPKIVTREGDRVVVKVVNNIKDNITIHWHGVRQMRTGWSDGPAYVTQCPIQTGQSYVYNF TINGQRGTLFWHAHVSWLRSTLYGPIIILPKAGLPLPFTEPHKDVPIIFGEWFNADPEAI VAQALQTGGGPNVSDAYTINGLPGPLYNCSSKDTFRLKVQPGKMYLLRLINAALNDELFF SVANHTLTVVDVDASYVKPFDTDVVLITPGQTTNVLLRAKPTAEAAGATHLMMARPYATG RPGTYDNTTVAAVLEYAPPGHIKSLPLLRPSLPALNDTAFAAGFAAKLRSLACPDYPSNV PRRVDKPFFFAVGLGTTPCPGSNNQTCQGPTNTTKFTASINNVSFDMPTTALLQAHYTGQ SAGVYTADFPASPLEPFNYTGTPPNNTNVSNGTRVVVLPYNASVEVVLQDTSILGAESHP LHLHGFDFFVVGQGTGNYDPSKHPAEFNLVDPVQRNTVGVPAGGWVAIRFFADNPGVWFM HCHLEVHTTWGLKMAWVVNDGPLPEQKLMPPPSDLPMC

Transcript Sequence

Transcript ID	Os03t0273200-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:9167743:9170251:-1 gene:Os03g0273200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LACCASE 11 description:Similar to Laccase (EC 1.10.3.2). (Os03t0273200-01);Similar to Laccase (EC 1.10.3.2). (Os03t0273200-02)
Sequence	AAGCGAGAAAAATGGGAGCACGCTGCCTCGCATTGCTTCTCCTCTATGGCACGTTGCTGC TGCTGTTGCTGCTGCCACAGCTGCCGCTCGCCGGCGCGGCGACGAGATACTACACCTTCA ATGTGAAGCTTCAGAATGTGACACGGCTGTGCAACACCCGGGCAATCCCGACGGTGAACG GCAAGTTCCCCGGGCCGAAAATAGTCACCAGGGAGGGAGACCGCGTCGTCGTCAAGGTGG TCAACAATATCAAGGACAACATTACCATCCACTGGCACGGGGTGAGGCAGATGCGGACGG GGTGGTCGGACGGGCCGGCGTACGTGACGCAGTGCCCGATCCAGACGGGGCAGAGCTACG TGTACAACTTCACCATCAACGGGCAGAGGGGCACCCTGTTCTGGCACGCGCACGTCTCCT GGCTGCGATCCACGCTGTACGGCCCCATCATCATCCTCCCCAAGGCCGGCCTCCCGTTGC CCTTCACCGAGCCGCACAAGGACGTGCCCATCATCTTCGGAGAGTGGTTTAACGCGGACC CTGAGGCGATCGTCGCGCAGGCGCTTCAGACCGGCGGTGGGCCCAACGTCTCCGACGCCT ACACCATCAACGGGCTTCCCGGCCCATTGTACAACTGCTCAAGCAAAGACACGTTTAGGC TCAAGGTGCAGCCCGGAAAGATGTACCTGCTCCGGCTGATCAACGCTGCGCTCAACGACG AGCTCTTCTTCTCGGTGGCCAACCACACGCTCACCGTCGTCGACGTGGACGCCTCCTACG TCAAGCCGTTCGACACGGACGTGGTCCTCATCACGCCGGGGCAGACCACCAACGTGCTGC TCCGCGCCAAGCCGACGGCCGAGGCCGCCGGCGCCACGCACCTCATGATGGCGCGCCCCT ACGCCACGGGCCGCCCCGGCACCTACGACAACACCACCGTTGCCGCCGTCCTGGAGTACG CGCCACCGGGGCACATCAAGAGCCTCCCGCTCCTCCGCCCGTCGCTGCCGGCGCTCAACG ACACGGCCTTCGCCGCCGGCTTCGCCGCCAAGCTCCGCAGCCTGGCCTGCCCGGACTACC CGTCCAACGTGCCGCGCCGCGTCGACAAGCCCTTCTTCTTCGCCGTGGGGCTCGGCACCA CCCCGTGCCCGGGCAGCAACAACCAGACGTGCCAGGGCCCCACCAACACCACCAAGTTCA CGGCGTCCATCAACAACGTCTCCTTCGACATGCCCACCACCGCGCTCCTGCAGGCGCACT ACACCGGCCAGTCCGCCGGCGTGTACACCGCCGACTTCCCCGCCTCGCCGCTGGAGCCGT TCAACTACACGGGCACGCCGCCCAACAACACCAACGTGTCGAACGGGACCAGGGTGGTGG TGCTGCCGTACAACGCGAGCGTGGAGGTGGTGCTGCAGGACACCAGCATCCTGGGCGCCG AGAGCCACCCGCTGCACCTCCACGGCTTCGACTTCTTCGTCGTCGGGCAGGGCACCGGCA ACTACGACCCGTCCAAGCACCCGGCGGAGTTCAACCTGGTCGACCCGGTGCAGAGGAACA CCGTCGGCGTGCCGGCCGGCGGCTGGGTCGCCATCAGGTTCTTCGCGGATAACCCTGGTG TCTGGTTCATGCATTGCCACCTGGAGGTTCACACAACCTGGGGGTTGAAGATGGCATGGG TGGTCAACGACGGCCCGTTGCCTGAGCAGAAGCTGATGCCTCCGCCGTCCGATCTTCCCA TGTGCTAGAGATCGATCAATCGTTGACATTATTTGACCAAGGCTGTGATTCGTTTATTCC GTTTGGTTTGCTACACATAATTTGTCAATGGATAATGCCGTACGTACATACCTGCAGGAT TGAGGTCTTGTTTTCCATTCTTCCAAAGGTGTTGTTTATTCTTGTAAGGGGTTTGCCATT GTTTTTTTTTTAAATTCTACAAGTACTTTTAGCTCGAAAGTTCGGCCGTATATGGTCAAT AAGAATAGTTTGACTCTTACATTTTG