Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0272400-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:9138612:9143528:1 gene:Os03g0272400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os03t0272400-01)
Sequence

ATGGATCACAGCGGCAGCGTCAGCGCCGGCGGCAAGATGATGGTGAAGGCGGCGGCGGCG
GCGGAGTCGGCTTCTACCAACGAACGCACCCAGAGCTTCAGCGGCTGCAATTCAGAGAAA
TTTTACCATATCGAAAGCCCTCATAAGAAAAGGAAGTCTCAGTATGAGCTGAGTGATACT
AGGGTTTCATCACTGAAGTACAAGTTTCGGAACAGATTAGCTTGGCAGGAAGATGAATCT
TCAAGAACAGAAAGCTTAGGATGCAACAGTATTTTCGTCAACAGGAACTATGACATGGAT
ATGGTGAACAGAGTTGAAGAATTGGAGTCCTGTGACAACACCCAAAGCCTTATTGGTGGG
TGCATTGAAGTGGACTCTATAAACGGAATCGAGAGCCACAAAATGCTGAAGGTCCAGGCA
TTTTCATCCAGCAGCTCAAGCAACAACATTTCATCTGATGCCTTCACTTCTTCCCGTAGT
AATGGCACCAAAGATACTGACAGTTGGGATATGCAGCACCTGGAGTATGATCACCCTGGT
CTAATGCTGCTACCATATGATGATGACATAGAGGAGGCATACGATGTACTAGGACAATAT
GATGTTGTAATGAAAAATGATCTAGCGAGTGGTGATGTTGATGGTTCTGCTGCTGGTGTC
ATAGATGAGAAGCTTTACTCGAATGGAATAGAAGATTTACTCATATTGCCAAGAGGCCAG
AATAGCATTCATGACGAGAAGAATAAGCTGACGATCGATCAAGAGTTTGAGCAGTATTTT
ACAAGGCTCATGCTTTAG

Peptide Sequence

PEP ID

Os03t0272400-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:9138612:9143528:1 gene:Os03g0272400 transcript:Os03t0272400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os03t0272400-01)
Sequence

MDHSGSVSAGGKMMVKAAAAAESASTNERTQSFSGCNSEKFYHIESPHKKRKSQYELSDT
RVSSLKYKFRNRLAWQEDESSRTESLGCNSIFVNRNYDMDMVNRVEELESCDNTQSLIGG
CIEVDSINGIESHKMLKVQAFSSSSSSNNISSDAFTSSRSNGTKDTDSWDMQHLEYDHPG
LMLLPYDDDIEEAYDVLGQYDVVMKNDLASGDVDGSAAGVIDEKLYSNGIEDLLILPRGQ
NSIHDEKNKLTIDQEFEQYFTRLML

Transcript Sequence

Transcript ID

Os03t0272400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:9138612:9143528:1 gene:Os03g0272400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os03t0272400-01)
Sequence

ATATAGTATGTGCCTGCCTGCCCCTCGCCATCCCCATTTCCTCCACCTTCCTACTACAGC
TGCTTTCCGATGGATCACAGCGGCAGCGTCAGCGCCGGCGGCAAGATGATGGTGAAGGCG
GCGGCGGCGGCGGAGTCGGCTTCTACCAACGAACGCACCCAGAGCTTCAGCGGCTGCAAT
TCAGAGAAATTTTACCATATCGAAAGCCCTCATAAGAAAAGGAAGTCTCAGTATGAGCTG
AGTGATACTAGGGTTTCATCACTGAAGTACAAGTTTCGGAACAGATTAGCTTGGCAGGAA
GATGAATCTTCAAGAACAGAAAGCTTAGGATGCAACAGTATTTTCGTCAACAGGAACTAT
GACATGGATATGGTGAACAGAGTTGAAGAATTGGAGTCCTGTGACAACACCCAAAGCCTT
ATTGGTGGGTGCATTGAAGTGGACTCTATAAACGGAATCGAGAGCCACAAAATGCTGAAG
GTCCAGGCATTTTCATCCAGCAGCTCAAGCAACAACATTTCATCTGATGCCTTCACTTCT
TCCCGTAGTAATGGCACCAAAGATACTGACAGTTGGGATATGCAGCACCTGGAGTATGAT
CACCCTGGTCTAATGCTGCTACCATATGATGATGACATAGAGGAGGCATACGATGTACTA
GGACAATATGATGTTGTAATGAAAAATGATCTAGCGAGTGGTGATGTTGATGGTTCTGCT
GCTGGTGTCATAGATGAGAAGCTTTACTCGAATGGAATAGAAGATTTACTCATATTGCCA
AGAGGCCAGAATAGCATTCATGACGAGAAGAATAAGCTGACGATCGATCAAGAGTTTGAG
CAGTATTTTACAAGGCTCATGCTTTAGCATTGATGATGTCATAAATCTCCGCTCTGTTCA
ACATCGGAAGACGCTTTGCTCCCTGCAGTCAGTGTGTGATTTGAGCTTAGCCCTGCACGA
GCGAATGCGAGTGTTAGCTGCTATAGGAGCTAGGTGCCTATTTTTGTACATCTTCTTCAC
TGCTATGTATATATGTCTTCTGAGTTCTGAACGGACTAATGTACTCCTCTGAAGTCTGA