Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0271200-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:9068392:9073951:1 gene:Os03g0271200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TOC75 description:Similar to Chloroplastic outer envelope membrane protein (OEP75) precursor (Outer membrane protein). (Os03t0271200-01);Similar to Protein TOC75, chloroplastic. (Os03t0271200-02)
Sequence	ATGGCGCTCACCTCCCAGAGCCTCTTCTTCTCCCCGCTGGCCGCCGGCCCATCCCGGAGA GTCCGGGGGCGGGGCCGCTCCACCTCCGTGTCAGCCGCCGCCTCCGCCTCGTCGCACAAC TCGCAGCCCCACGGCCACCCCCAACAACCCCTCGCCGTCGCGTCGTCCAGCTCCAAATCC GAATCTAAGGGCTCGAAAACCTTCGCCCTCGCCTCCGCCATCACTGCCGCCGCCTCTGGT GCATTCCTTCTCGCGTCATCTGGTGGCGGGTTCGGGGGCGGCGCCGGGGGTCCTCTCGGC GGTGGAGGCGGTGGATGGGGCGCCGGAGGAGGAGGAGGTGGTGGTGGTGGTGGCGGCGGC GGCGGGTTCTGGTCGCGGATCTTCTCCGGCGGCGCGGCGCACGCGGATGAGAAGTCGTCG GGGGATTGGGACCCGCACGGGCTCCCGGCAAACATCAACGTGCCGATGACGAAGCTGAGC GGGCTGAAGAGGTACAAGATCTCCGAGCTCAAGTTCTTCGACCGCGCCGCGGGAGGGGGA GGCGCGTTCACGGGGCCCGAGGATTCCTTCTTCGAGATGGTGACGCTGCAGCCCGGCGGC GTGTACACCAAGTCGCAGCTTCTGAAGGAGCTCGAGACGCTCGTGTCCTGTGGCATGTTC GAGAGGGTCGACCTCGAGGGGAAGGCCAAGCCCGATGGCACCCTTGGCCTCACCGTGTCT TTTGTCGAGAGCGTGTGGAGCGCTGCTAAGCAGTTCAAGTGCATCAATGTGGGGCTAATG TCGCAGTCGGGCCAGGTTGACTTCGACCAGGACATGACAGAGAGGGAGAAGATGGATTAC CTCCGGAAGCAGGAGCGTGATTACCAGCAGCGTGTTCGTGGTGCCAAGCCGTGCATATTG CCAGATAACGTGCGTGGGGAGGTGCTAGGAATGATGAAGAAGCAGGAGAAGGTGAGCGCT AGGCTCCTGCAGAGGATCAGGGACCATGTCCAGAAATGGTACCACAATGAGGGGTTCGTC TGCGCCCAGGTGGTGAACTTTGGAAACCTAAACACCAGTGAGGTTGTTTGCGAGGTGGTC GAGGGGGATATAACCAAAGTGGAGTACCAGTTCCAGGATAAGCTTGGAAATTTTGTTGAG GGGAATACCCAAATTCCTATCATAGACAGGGAGCTCCCACAGCAGCTTCGACCTGGCCAT ATCTTTAACATTGGAGCAGGGAAGCAAGCTCTGAAGAATATAAATTCACTTGCTTTATTC TCCAATATAGAGGTGAATCCACGCCCTGATGAAACAAAAGAAGGGGGCATTGTGGTTGAA ATCAAGCTTAAAGAATTAGAACCGAAGTCAGCTGAAGTAAGTACAGAGTGGAGCATCGTA CCTGGACGTGAAGGCCGACCAACTCTGGCATCCATTCAACCTGGAGGAACTGTGTCATTT GAGCACCGGAACATCTATGGTCTAAACAGATCCATTGTTGGTTCTGTTACATCCAGCAAC CTGCTCAACCCTCAGGATGATCTCTCATTCAAGCTTGAGTATGTTCATCCTTATCTGGAT GGTGTGGATGACCGTAATAAAAACCGCACCTTCAAAACTAGCTGCTTCAATACCAGGAAA TTGAGTCCTGTCTTTGTTGCTGGCCCCAATATGGATGAAGCTCCACCTGTTTGGGTTGAC AGAGTTGGATTCAAAGCCAACATAACAGAGAGCTTCACACGTCAGAGCAAATTCACATAT GGCCTTGTGGTAGAGGAGATTACAACGCGTGATGAAACCAACAGCATCTGCACTCATGGT TCTCGAGCAATGCCTAGTGGTGGCCTGAGTATGGATGGACCTCCCACAACCCTCAGTGGT ACTGGCATAGATCGGATGGCTTTTCTGCAAGCAAATATAACTAGAGACAATACAGAATTT GTAAATGGTGCAGTTATTGGCGACAGATGTATTTTCCAGTTGGATCAAGGTCTTGGCATT GGAAGCAAAAACCCATTCTTCAACCGTCACCAACTTACTTTGACAAAGTTTGTTAATTTA AACAAGCAGGAGAAAGGTGCTGGCAAGCCACTTCCAGCTGTTTTGGTTCTTCATGGTCAT TATGCAGGTTGTGTAGGAGATCTGCCAAGCTATGATGCATTTACACTTGGAGGACCTTAC TCAGTTAGGGGCTATGGTATGGGTGAACTGGGTGCTTCCAGGAATGTTCTTGAGGTTGCG AGTGAGTTGCGTATTCCTGTGAGGAACACATATGTGTATGGATTTGTTGAACATGGCACT GACCTTGGCAGTTCCAAGGATGTGAAAGGGAACCCCACAGAGTTCTTCCGACGGGTTGGT CATGGGTCATCATATGGTCTTGGCGTCAAGCTTGGCTTGGTAAGGGGAGAGTACATCGTA GATCACAATGCTGGTACTGGAACAGTTTTCTTCAGATTTGGCGAGAGATTTTGA

Peptide Sequence

PEP ID	Os03t0271200-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:9068392:9073951:1 gene:Os03g0271200 transcript:Os03t0271200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TOC75 description:Similar to Chloroplastic outer envelope membrane protein (OEP75) precursor (Outer membrane protein). (Os03t0271200-01);Similar to Protein TOC75, chloroplastic. (Os03t0271200-02)
Sequence	MALTSQSLFFSPLAAGPSRRVRGRGRSTSVSAAASASSHNSQPHGHPQQPLAVASSSSKS ESKGSKTFALASAITAAASGAFLLASSGGGFGGGAGGPLGGGGGGWGAGGGGGGGGGGGG GGFWSRIFSGGAAHADEKSSGDWDPHGLPANINVPMTKLSGLKRYKISELKFFDRAAGGG GAFTGPEDSFFEMVTLQPGGVYTKSQLLKELETLVSCGMFERVDLEGKAKPDGTLGLTVS FVESVWSAAKQFKCINVGLMSQSGQVDFDQDMTEREKMDYLRKQERDYQQRVRGAKPCIL PDNVRGEVLGMMKKQEKVSARLLQRIRDHVQKWYHNEGFVCAQVVNFGNLNTSEVVCEVV EGDITKVEYQFQDKLGNFVEGNTQIPIIDRELPQQLRPGHIFNIGAGKQALKNINSLALF SNIEVNPRPDETKEGGIVVEIKLKELEPKSAEVSTEWSIVPGREGRPTLASIQPGGTVSF EHRNIYGLNRSIVGSVTSSNLLNPQDDLSFKLEYVHPYLDGVDDRNKNRTFKTSCFNTRK LSPVFVAGPNMDEAPPVWVDRVGFKANITESFTRQSKFTYGLVVEEITTRDETNSICTHG SRAMPSGGLSMDGPPTTLSGTGIDRMAFLQANITRDNTEFVNGAVIGDRCIFQLDQGLGI GSKNPFFNRHQLTLTKFVNLNKQEKGAGKPLPAVLVLHGHYAGCVGDLPSYDAFTLGGPY SVRGYGMGELGASRNVLEVASELRIPVRNTYVYGFVEHGTDLGSSKDVKGNPTEFFRRVG HGSSYGLGVKLGLVRGEYIVDHNAGTGTVFFRFGERF

Transcript Sequence

Transcript ID	Os03t0271200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:9068392:9073951:1 gene:Os03g0271200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TOC75 description:Similar to Chloroplastic outer envelope membrane protein (OEP75) precursor (Outer membrane protein). (Os03t0271200-01);Similar to Protein TOC75, chloroplastic. (Os03t0271200-02)
Sequence	AGGGCTAGACGAGAAAAGCCCCCCCATCCGCCTCCTCCTCCTCCCCCAAATTCCTCTGCT TCCCCCGGCGGCAAGACCGAAGCCTCGCCACCATCCGCGGCGGCCGCAATGGCGCTCACC TCCCAGAGCCTCTTCTTCTCCCCGCTGGCCGCCGGCCCATCCCGGAGAGTCCGGGGGCGG GGCCGCTCCACCTCCGTGTCAGCCGCCGCCTCCGCCTCGTCGCACAACTCGCAGCCCCAC GGCCACCCCCAACAACCCCTCGCCGTCGCGTCGTCCAGCTCCAAATCCGAATCTAAGGGC TCGAAAACCTTCGCCCTCGCCTCCGCCATCACTGCCGCCGCCTCTGGTGCATTCCTTCTC GCGTCATCTGGTGGCGGGTTCGGGGGCGGCGCCGGGGGTCCTCTCGGCGGTGGAGGCGGT GGATGGGGCGCCGGAGGAGGAGGAGGTGGTGGTGGTGGTGGCGGCGGCGGCGGGTTCTGG TCGCGGATCTTCTCCGGCGGCGCGGCGCACGCGGATGAGAAGTCGTCGGGGGATTGGGAC CCGCACGGGCTCCCGGCAAACATCAACGTGCCGATGACGAAGCTGAGCGGGCTGAAGAGG TACAAGATCTCCGAGCTCAAGTTCTTCGACCGCGCCGCGGGAGGGGGAGGCGCGTTCACG GGGCCCGAGGATTCCTTCTTCGAGATGGTGACGCTGCAGCCCGGCGGCGTGTACACCAAG TCGCAGCTTCTGAAGGAGCTCGAGACGCTCGTGTCCTGTGGCATGTTCGAGAGGGTCGAC CTCGAGGGGAAGGCCAAGCCCGATGGCACCCTTGGCCTCACCGTGTCTTTTGTCGAGAGC GTGTGGAGCGCTGCTAAGCAGTTCAAGTGCATCAATGTGGGGCTAATGTCGCAGTCGGGC CAGGTTGACTTCGACCAGGACATGACAGAGAGGGAGAAGATGGATTACCTCCGGAAGCAG GAGCGTGATTACCAGCAGCGTGTTCGTGGTGCCAAGCCGTGCATATTGCCAGATAACGTG CGTGGGGAGGTGCTAGGAATGATGAAGAAGCAGGAGAAGGTGAGCGCTAGGCTCCTGCAG AGGATCAGGGACCATGTCCAGAAATGGTACCACAATGAGGGGTTCGTCTGCGCCCAGGTG GTGAACTTTGGAAACCTAAACACCAGTGAGGTTGTTTGCGAGGTGGTCGAGGGGGATATA ACCAAAGTGGAGTACCAGTTCCAGGATAAGCTTGGAAATTTTGTTGAGGGGAATACCCAA ATTCCTATCATAGACAGGGAGCTCCCACAGCAGCTTCGACCTGGCCATATCTTTAACATT GGAGCAGGGAAGCAAGCTCTGAAGAATATAAATTCACTTGCTTTATTCTCCAATATAGAG GTGAATCCACGCCCTGATGAAACAAAAGAAGGGGGCATTGTGGTTGAAATCAAGCTTAAA GAATTAGAACCGAAGTCAGCTGAAGTAAGTACAGAGTGGAGCATCGTACCTGGACGTGAA GGCCGACCAACTCTGGCATCCATTCAACCTGGAGGAACTGTGTCATTTGAGCACCGGAAC ATCTATGGTCTAAACAGATCCATTGTTGGTTCTGTTACATCCAGCAACCTGCTCAACCCT CAGGATGATCTCTCATTCAAGCTTGAGTATGTTCATCCTTATCTGGATGGTGTGGATGAC CGTAATAAAAACCGCACCTTCAAAACTAGCTGCTTCAATACCAGGAAATTGAGTCCTGTC TTTGTTGCTGGCCCCAATATGGATGAAGCTCCACCTGTTTGGGTTGACAGAGTTGGATTC AAAGCCAACATAACAGAGAGCTTCACACGTCAGAGCAAATTCACATATGGCCTTGTGGTA GAGGAGATTACAACGCGTGATGAAACCAACAGCATCTGCACTCATGGTTCTCGAGCAATG CCTAGTGGTGGCCTGAGTATGGATGGACCTCCCACAACCCTCAGTGGTACTGGCATAGAT CGGATGGCTTTTCTGCAAGCAAATATAACTAGAGACAATACAGAATTTGTAAATGGTGCA GTTATTGGCGACAGATGTATTTTCCAGTTGGATCAAGGTCTTGGCATTGGAAGCAAAAAC CCATTCTTCAACCGTCACCAACTTACTTTGACAAAGTTTGTTAATTTAAACAAGCAGGAG AAAGGTGCTGGCAAGCCACTTCCAGCTGTTTTGGTTCTTCATGGTCATTATGCAGGTTGT GTAGGAGATCTGCCAAGCTATGATGCATTTACACTTGGAGGACCTTACTCAGTTAGGGGC TATGGTATGGGTGAACTGGGTGCTTCCAGGAATGTTCTTGAGGTTGCGAGTGAGTTGCGT ATTCCTGTGAGGAACACATATGTGTATGGATTTGTTGAACATGGCACTGACCTTGGCAGT TCCAAGGATGTGAAAGGGAACCCCACAGAGTTCTTCCGACGGGTTGGTCATGGGTCATCA TATGGTCTTGGCGTCAAGCTTGGCTTGGTAAGGGGAGAGTACATCGTAGATCACAATGCT GGTACTGGAACAGTTTTCTTCAGATTTGGCGAGAGATTTTGAAAACAGTTCAGTCAACCA CCAGTGGATAATAGATCATTGAGGTGGGCTGTTTAGCTCATTTGCAGGCATAGAATCCTG AAGCACCTATGCATGTTGTGTGAACCGTTGATGTTTCTGGATTCAACTTGAATAGGAACT TCTGTTCCCGCTGAAATAATGAAGCAATGTTGCTTCCATCCAAAGTGAGAAGTTAGCTTT CAGGATTAGTATTGTGTAGGAAGCAAGATTTGATCGCAGTCTGGTGCTTCTTTGACAGAA GTACTTGCTCCTGTCATTTTCAGTGCTAGAGTTTTTTTGTTTTGTTCTTTTGCTTTGGTT AGATAAAGTGTTCTAGCAGTTTTGTCCCATATTCGGGCTATAAATTTTAGTTGAACTATG GTAAGTTGGTAACTACTCCTATCTGTTGCTGCATTTTGTCGGCTCAGAGCTTCACCTGTT TATCTGAATCTTTTGGCACCGCTGAATTCAAACCTTGGACCTATCATACTGGTGTCAAGC GTTTCTTCT