Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0269100-02
CDS Infomation	cds chromosome:IRGSP-1.0:3:8950039:8952082:-1 gene:Os03g0269100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Senescence-associated Gene13 description:Short chain alcohol dehydrogenase-like. (Os03t0269100-01);Similar to tropinone reductase. (Os03t0269100-02)
Sequence	ATGGCCGAGGCGGTCGCAAGCGGCGCAGCGGGGAGATGGACCCTCCGCGGCAAGACGGCC CTCGTCACCGGCGGCACCCGCGGCATCGGGTACTCACCCCAACACCCTTCTCTGGTTCTC CCCTATCGCTACCCAGTGAGGAGTGAGACCTCCACCGCAGAGCCTTTGCTGCTCTTCCAC GATCAACGCGGGGAATTCATGCGCAGGCATGCGGTGGTGGACGAGCTGGCGGCGCTGGGG GCGGCCGTGCACACCTGCTCCAGGAAGGAGGCCGAGCTGGGCGAGCGCCTCAGGGAGTGG GAGGGCAAGGGCTTCCGCGTCACCGGCTCAGTCTGCGACGTCTCCGTGCGGGAGCAGCGG GAACGCATGCTCCGCGAGGTCGCCGGCCTCTACGGTGGCAAGCTCGACATCCTCGTGAAC AACGTGGGAACAAACTTTTCAAAACAAACCACTGAATACTCTGCAGATGATTACTCGTTC ATAATGGCCACCAATCTTGAATCTGCGTATCATCTGTGCCAACTTGCTCATCCTCTTCTC AAATCATCTGGGTCAGGAAGCGTTGTCTTCATATCGTCAGTCTCTGGAGTGGTGGCTGTA AGTTCTGGCTCTGTCTATGCGATGACAAAAGGTGCCATGAACCAGCTGGCCAAGAACCTG GCATGTGAGTGGGCGAAAGACAATATAAGAACCAATTCTGTTGCACCATGGTACATGAAG ACTTCACTTGTGGAAGATGAATTGGCAAGGAAGGACTTCGCTGACAGCGTCGTGCGTCGA ACAGCGCTGAAGCGCGTGGGAGAACCAGAAGAGGTGTCATCGCTGGTCGCGTTCCTGTGC ATGCCCGGCGCTTCCTACATCACCGGCCAGACGATCTCGGTCGACGGCGGCATGACCATA AACGGACTGTATCCAACTCAGGACTAG

Peptide Sequence

PEP ID	Os03t0269100-02
PEP Infomation	pep chromosome:IRGSP-1.0:3:8950039:8952082:-1 gene:Os03g0269100 transcript:Os03t0269100-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Senescence-associated Gene13 description:Short chain alcohol dehydrogenase-like. (Os03t0269100-01);Similar to tropinone reductase. (Os03t0269100-02)
Sequence	MAEAVASGAAGRWTLRGKTALVTGGTRGIGYSPQHPSLVLPYRYPVRSETSTAEPLLLFH DQRGEFMRRHAVVDELAALGAAVHTCSRKEAELGERLREWEGKGFRVTGSVCDVSVREQR ERMLREVAGLYGGKLDILVNNVGTNFSKQTTEYSADDYSFIMATNLESAYHLCQLAHPLL KSSGSGSVVFISSVSGVVAVSSGSVYAMTKGAMNQLAKNLACEWAKDNIRTNSVAPWYMK TSLVEDELARKDFADSVVRRTALKRVGEPEEVSSLVAFLCMPGASYITGQTISVDGGMTI NGLYPTQD

Transcript Sequence

Transcript ID	Os03t0269100-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:8950039:8952082:-1 gene:Os03g0269100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Senescence-associated Gene13 description:Short chain alcohol dehydrogenase-like. (Os03t0269100-01);Similar to tropinone reductase. (Os03t0269100-02)
Sequence	GCAAAATTATTCCCAGCCGCACCCTCGAGGCCGATGGCCGAGGCGGTCGCAAGCGGCGCA GCGGGGAGATGGACCCTCCGCGGCAAGACGGCCCTCGTCACCGGCGGCACCCGCGGCATC GGGTACTCACCCCAACACCCTTCTCTGGTTCTCCCCTATCGCTACCCAGTGAGGAGTGAG ACCTCCACCGCAGAGCCTTTGCTGCTCTTCCACGATCAACGCGGGGAATTCATGCGCAGG CATGCGGTGGTGGACGAGCTGGCGGCGCTGGGGGCGGCCGTGCACACCTGCTCCAGGAAG GAGGCCGAGCTGGGCGAGCGCCTCAGGGAGTGGGAGGGCAAGGGCTTCCGCGTCACCGGC TCAGTCTGCGACGTCTCCGTGCGGGAGCAGCGGGAACGCATGCTCCGCGAGGTCGCCGGC CTCTACGGTGGCAAGCTCGACATCCTCGTGAACAACGTGGGAACAAACTTTTCAAAACAA ACCACTGAATACTCTGCAGATGATTACTCGTTCATAATGGCCACCAATCTTGAATCTGCG TATCATCTGTGCCAACTTGCTCATCCTCTTCTCAAATCATCTGGGTCAGGAAGCGTTGTC TTCATATCGTCAGTCTCTGGAGTGGTGGCTGTAAGTTCTGGCTCTGTCTATGCGATGACA AAAGGTGCCATGAACCAGCTGGCCAAGAACCTGGCATGTGAGTGGGCGAAAGACAATATA AGAACCAATTCTGTTGCACCATGGTACATGAAGACTTCACTTGTGGAAGATGAATTGGCA AGGAAGGACTTCGCTGACAGCGTCGTGCGTCGAACAGCGCTGAAGCGCGTGGGAGAACCA GAAGAGGTGTCATCGCTGGTCGCGTTCCTGTGCATGCCCGGCGCTTCCTACATCACCGGC CAGACGATCTCGGTCGACGGCGGCATGACCATAAACGGACTGTATCCAACTCAGGACTAG ACCGAATAGGCAAACCGTATGGCCGTATGGGGATCGAAGAACTGTGTTTGGAGAGGTCAG AGGTGAGGCTCGAACGTCAGTAAAACTCAACTATCCCAAACAAACAGGAGATCGCAAATA GATGCTTGTGAACTTGATTGGTTTGCACTTGGGTATGCACCGCATGCTACTGTACTAAAT TAAAAAAAAACGTTTGTTGCGAGCAACAAAACGAAATACTGCGTGGATAGGGGGCCTACT GCATAGTGTTGTGTCGTTCGTATGCGCCATAGACAAACGGAATGCCCTTGAAAAAAAGTT TAATTGGATGC