Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0268100-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:8892244:8895472:-1 gene:Os03g0268100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to T-snare. (Os03t0268100-01)
Sequence

ATGGAAGCCAATCACGCCTCGCGGGGGCGCCGCACCCTGGAGGAGATCCGGCAGAAGAGA
GCCGCCGAGAGGATGCAGCAGCAGCACAACCCGGCCGCCGCGGCGTCCCTTGTCGACCCT
TACGGGAACCCAGGAGCCGGAGCTGAGCTTCTTGGTCGAGTTAGAGAACTTGAAAATGGG
AACATAGCATTGGAGAGGGAAAACCAAATGCTGTTATCCAAGATTGCTGAGAAGGAAGTC
GAGAAGGATTCCCTCGTTAACCGCTTGAACGACCTTGAGCGGAATATAGTACCCTCCTTG
AAAAAGGCTGTGAATGACATTTCTTTGGAGAAAGATGCCGCAGCTGTTGCTAAGGAGGAT
GCTCTCGCACAACTAAGGAGCATGAAGAAACGACTGAAGGAGGCAGAAGAGGAGCAATAC
AGGGCAGAAGAGGACTCTGCATCATTGAGAGCACAGTTAAATACCCTGCAGCAGCAAGTA
ATGAGCAACTCTTATACTGGATTTCCAGTTGGTGTATCAAATGAGCACATTCTTGCTATG
GAAAAGGAGGTAGAAAATTTGCAGGCTCAGCTGAAGCAAGAATCATTGCTAAGGCAGCAG
GAGCAACAGAAACTTTCTGAAGAGTCCCTATTAAGGCAACAAGAGCAACAAAAGCTAACT
GGAGAACAGTCTCATGCTGCTTCCTTGGTTGCGGAAAAGAAAGAGTTGGAAGAAAAAATT
GCTGCCTTGACGAAGAAAGCATCAGATGAAGCTTCTGAATTTGCTGCACGCAAGGCATTT
TCAATGGAAGATAGGGAAAAACTTGAAAGCCAATTGCATGATATGGCTTTGATGGTTGAG
AGGCTAGAGGGCAGCCGCCAAAAGTTGTTAATGGAGATTGATTCTCAATCATCAGAAATA
GAAAAGCTGTTTGAGGAGAACTCAGCCTTGTCTACTTCATACCAAGAAGCTGTAGCTGTT
ACAATGCAATGGGAAAACCAGGTAAAAGATTGTCTCAAGCAAAATGAAGAGCTACGCTCT
CACTTAGAGAAGTTAAGACTTGAGCAAGCTACTCTATTGAAAACAAGTAATACCACTATC
CAGCCAGATGGGCAGAACGAGACCAGCATTTCATTCCCGCCAGAGTTTGTAACTGAGAAT
CTCTCCCTAAAGGATCAGCTCATCAAAGAACAGAGCAGATCCGAGGGGTTGTCGGCAGAA
ATAATGAAACTTTCAGCTGAACTCAGAAAAGCGGTGCAAGCGCAGAATAACCTCGCACGC
CTATATAGACCTGTGTTAAGAGGCATAGAGAGCAACTTAATGAAAATGAAACAAGAAACA
TATGCAACGATCCAGTAA

Peptide Sequence

PEP ID

Os03t0268100-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:8892244:8895472:-1 gene:Os03g0268100 transcript:Os03t0268100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to T-snare. (Os03t0268100-01)
Sequence

MEANHASRGRRTLEEIRQKRAAERMQQQHNPAAAASLVDPYGNPGAGAELLGRVRELENG
NIALERENQMLLSKIAEKEVEKDSLVNRLNDLERNIVPSLKKAVNDISLEKDAAAVAKED
ALAQLRSMKKRLKEAEEEQYRAEEDSASLRAQLNTLQQQVMSNSYTGFPVGVSNEHILAM
EKEVENLQAQLKQESLLRQQEQQKLSEESLLRQQEQQKLTGEQSHAASLVAEKKELEEKI
AALTKKASDEASEFAARKAFSMEDREKLESQLHDMALMVERLEGSRQKLLMEIDSQSSEI
EKLFEENSALSTSYQEAVAVTMQWENQVKDCLKQNEELRSHLEKLRLEQATLLKTSNTTI
QPDGQNETSISFPPEFVTENLSLKDQLIKEQSRSEGLSAEIMKLSAELRKAVQAQNNLAR
LYRPVLRGIESNLMKMKQETYATIQ

Transcript Sequence

Transcript ID

Os03t0268100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:8892244:8895472:-1 gene:Os03g0268100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to T-snare. (Os03t0268100-01)
Sequence

TTTGGGTTTCTTCCCCTTCTCTTCTCCGGGCATCACAGGATCGAGGCGATACCGGAGGAG
CCCCCGCCATCGGCCATCCTCCTTCGCGTCGCGCCTCCGGATCCCGAGCTTCCAGAAAGC
CGACCGGTTCGTCGGCCGGTCGCCGGAGATGGAAGCCAATCACGCCTCGCGGGGGCGCCG
CACCCTGGAGGAGATCCGGCAGAAGAGAGCCGCCGAGAGGATGCAGCAGCAGCACAACCC
GGCCGCCGCGGCGTCCCTTGTCGACCCTTACGGGAACCCAGGAGCCGGAGCTGAGCTTCT
TGGTCGAGTTAGAGAACTTGAAAATGGGAACATAGCATTGGAGAGGGAAAACCAAATGCT
GTTATCCAAGATTGCTGAGAAGGAAGTCGAGAAGGATTCCCTCGTTAACCGCTTGAACGA
CCTTGAGCGGAATATAGTACCCTCCTTGAAAAAGGCTGTGAATGACATTTCTTTGGAGAA
AGATGCCGCAGCTGTTGCTAAGGAGGATGCTCTCGCACAACTAAGGAGCATGAAGAAACG
ACTGAAGGAGGCAGAAGAGGAGCAATACAGGGCAGAAGAGGACTCTGCATCATTGAGAGC
ACAGTTAAATACCCTGCAGCAGCAAGTAATGAGCAACTCTTATACTGGATTTCCAGTTGG
TGTATCAAATGAGCACATTCTTGCTATGGAAAAGGAGGTAGAAAATTTGCAGGCTCAGCT
GAAGCAAGAATCATTGCTAAGGCAGCAGGAGCAACAGAAACTTTCTGAAGAGTCCCTATT
AAGGCAACAAGAGCAACAAAAGCTAACTGGAGAACAGTCTCATGCTGCTTCCTTGGTTGC
GGAAAAGAAAGAGTTGGAAGAAAAAATTGCTGCCTTGACGAAGAAAGCATCAGATGAAGC
TTCTGAATTTGCTGCACGCAAGGCATTTTCAATGGAAGATAGGGAAAAACTTGAAAGCCA
ATTGCATGATATGGCTTTGATGGTTGAGAGGCTAGAGGGCAGCCGCCAAAAGTTGTTAAT
GGAGATTGATTCTCAATCATCAGAAATAGAAAAGCTGTTTGAGGAGAACTCAGCCTTGTC
TACTTCATACCAAGAAGCTGTAGCTGTTACAATGCAATGGGAAAACCAGGTAAAAGATTG
TCTCAAGCAAAATGAAGAGCTACGCTCTCACTTAGAGAAGTTAAGACTTGAGCAAGCTAC
TCTATTGAAAACAAGTAATACCACTATCCAGCCAGATGGGCAGAACGAGACCAGCATTTC
ATTCCCGCCAGAGTTTGTAACTGAGAATCTCTCCCTAAAGGATCAGCTCATCAAAGAACA
GAGCAGATCCGAGGGGTTGTCGGCAGAAATAATGAAACTTTCAGCTGAACTCAGAAAAGC
GGTGCAAGCGCAGAATAACCTCGCACGCCTATATAGACCTGTGTTAAGAGGCATAGAGAG
CAACTTAATGAAAATGAAACAAGAAACATATGCAACGATCCAGTAATTTTGGATGACCGA
TTATTTTCCCCCCTTACCTGCCTACACACAAAAGGCAGAGCTTACAGCAAGTAACGATCA
TTTGTAGAGTTACAATCAACTATAGTCAACATTGTTGTACGTGTACATTCGGTTCACTGT
TGTATTATATTGGAAATGGGGGC