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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0267000-00
CDS Infomation

cds chromosome:IRGSP-1.0:3:8834869:8835576:1 gene:Os03g0267000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:18.0-KD CLASS I HEAT SHOCK PROTEIN description:Low molecular mass heat shock protein Oshsp18.0. (Os03t0267000-00)
Sequence

ATGTCGCTGATCCGCCGCAGCAACGTGTTCGACCCCTTCTCCCTCGACCTCTGGGACCCC
TTCGACGGCTTCCCCTTCGGCTCCGGCAGCAGAAGCAGCGGCAGCATCTTCCCGTCCTTC
CCCCGCGGCACCTCCTCCGAGACCGCGGCCTTCGCCGGCGCGCGCATCGACTGGAAGGAG
ACGCCGGAGGCGCACGTGTTCAAGGCGGACGTGCCGGGGCTGAAGAAGGAGGAGGTCAAG
GTGGAGGTGGAGGACGGCAACGTCCTCCAGATCAGCGGCGAGCGCAGCAAGGAGCAGGAG
GAGAAGACGGACAAGTGGCACCGCGTGGAGCGCAGCAGCGGCAAGTTCCTCCGCAGGTTC
CGGCTGCCGGAGAACACCAAGCCGGAGCAGATCAAGGCGTCCATGGAGAACGGCGTGCTC
ACCGTCACCGTGCCCAAGGAGGAGCCCAAGAAGCCCGACGTCAAGTCCATCCAGGTTACC
GGCTAG

Peptide Sequence

PEP ID

Os03t0267000-00
PEP Infomation

pep chromosome:IRGSP-1.0:3:8834869:8835576:1 gene:Os03g0267000 transcript:Os03t0267000-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:18.0-KD CLASS I HEAT SHOCK PROTEIN description:Low molecular mass heat shock protein Oshsp18.0. (Os03t0267000-00)
Sequence

MSLIRRSNVFDPFSLDLWDPFDGFPFGSGSRSSGSIFPSFPRGTSSETAAFAGARIDWKE
TPEAHVFKADVPGLKKEEVKVEVEDGNVLQISGERSKEQEEKTDKWHRVERSSGKFLRRF
RLPENTKPEQIKASMENGVLTVTVPKEEPKKPDVKSIQVTG

Transcript Sequence

Transcript ID

Os03t0267000-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:8834869:8835576:1 gene:Os03g0267000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:18.0-KD CLASS I HEAT SHOCK PROTEIN description:Low molecular mass heat shock protein Oshsp18.0. (Os03t0267000-00)
Sequence

CTTGAGAATTGAGATCACCCTCTTTCCATCTAGAACACAAACCAGACAACCAAAAAACAG
CAAGACACAATACACAATGTCGCTGATCCGCCGCAGCAACGTGTTCGACCCCTTCTCCCT
CGACCTCTGGGACCCCTTCGACGGCTTCCCCTTCGGCTCCGGCAGCAGAAGCAGCGGCAG
CATCTTCCCGTCCTTCCCCCGCGGCACCTCCTCCGAGACCGCGGCCTTCGCCGGCGCGCG
CATCGACTGGAAGGAGACGCCGGAGGCGCACGTGTTCAAGGCGGACGTGCCGGGGCTGAA
GAAGGAGGAGGTCAAGGTGGAGGTGGAGGACGGCAACGTCCTCCAGATCAGCGGCGAGCG
CAGCAAGGAGCAGGAGGAGAAGACGGACAAGTGGCACCGCGTGGAGCGCAGCAGCGGCAA
GTTCCTCCGCAGGTTCCGGCTGCCGGAGAACACCAAGCCGGAGCAGATCAAGGCGTCCAT
GGAGAACGGCGTGCTCACCGTCACCGTGCCCAAGGAGGAGCCCAAGAAGCCCGACGTCAA
GTCCATCCAGGTTACCGGCTAGTAAGAAACTTCGGGTGTGACATGCACGGTGGAGAGCTT
CGATTCGAGCCTTCGGTTTGTGATCAATTGCAGTAAATAAAAGCGTCAAATCTGGTCCTC
AGTGTTTATGCTGTGAAAAAGTTCAAAGCTATGTTGGAAGTGAGCAAT