Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0266700-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:8819434:8824333:1 gene:Os03g0266700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Src homology-3 domain containing protein. (Os03t0266700-01)
Sequence

ATGGAGACGCTCAGGAAGCAGGCCAGCAAGCTCAGGGAGCACGTCGCCAAGCAGCAGCAG
GCTGTTCGGAAGCAGTTCAGTGCACGCTATAACCAGGATCCTTCTCTTGTCGATGAGGCG
GAACTTGAGTGCCACCAGAATCTTCAGAGGCTATACAACAGTACAAGAGCTGCTAAACAT
TTCCAACGAAGTATTGTACGAGGTGTCGAGGGTTTCATTGCTGTCAGCACCAAACAGATG
GAGATTGTGAAAAAGCTAGCTGAGGATTGTTGCAGATATGGAAACGACAATCAAAATTTT
GGTTTTATTCTTGCAAGGGCTTCAGTTGAGTTTGGTAATTCCCATAGCCAAATGGAGAAA
GAGCGGGAGAATCTTCTTAAATTTCTTGGAGAGCAGGTTTTTGAGCCTCTTCGAGAAATG
ATAATGAGTGCTCCTCTTGAAGATGCCCGCCTGTTAACTTACCGTTATCAACGGATCAGA
CAAGATATGGAATCTCAGATAGCTGATGTGATGAGAAAGCAACTGAAGTCCAAGGAGAGT
AGCGGTAATGCAGATAATTCTGTGAAACTGCAACATGCAGAATCAAAATTATCTGAGCTC
CGAACTACATTATCAGCATTAGGAAGAGAGGCAACTGCAGCTATGGAGGCTGTGGAGGTT
CAGCAACAACAGGTTACCTTTGACCGTCTCCTTGCAATGGTTGATGCTGAGAGAGCTTAT
CATCAGAATGCTGCTGATATTCTGAACAAACTTCACGACGAGATGGTCCAAGCAAAACAC
CATGATGAGCCGGAAAACCATTATGATGAGACATCATCAGATCCTAAAACAGCTGCAACA
CATGAGCATTCACGTAGCACATCCGAAGATCACATATTTACTAATACTAGTGAACCTACA
AGGACTGAAACCAGTGAACCTACAAGGACTGAAACTAGTGAACCTACAAGGAATGGTCAG
GAAGTGCATTATGTTGGAGAGGTAATCCATCCATTCGATGCTCAGGCTGATGGCGAGCTC
AGTATTTCCGTGGGAGATTATGTTGTGGTCCGGCAGGTGGCTCCCAATGGGTGGTCTGAA
GGGGAATGCAAAGGAAAAGCTGGCTGGTTCCCATCTGCCTATGTGGAGCAGAGGGACAAA
GCCCCGGCAAGTAAGGTGATAGAGCCTGGATTGCTGACTACTTAA

Peptide Sequence

PEP ID

Os03t0266700-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:8819434:8824333:1 gene:Os03g0266700 transcript:Os03t0266700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Src homology-3 domain containing protein. (Os03t0266700-01)
Sequence

METLRKQASKLREHVAKQQQAVRKQFSARYNQDPSLVDEAELECHQNLQRLYNSTRAAKH
FQRSIVRGVEGFIAVSTKQMEIVKKLAEDCCRYGNDNQNFGFILARASVEFGNSHSQMEK
ERENLLKFLGEQVFEPLREMIMSAPLEDARLLTYRYQRIRQDMESQIADVMRKQLKSKES
SGNADNSVKLQHAESKLSELRTTLSALGREATAAMEAVEVQQQQVTFDRLLAMVDAERAY
HQNAADILNKLHDEMVQAKHHDEPENHYDETSSDPKTAATHEHSRSTSEDHIFTNTSEPT
RTETSEPTRTETSEPTRNGQEVHYVGEVIHPFDAQADGELSISVGDYVVVRQVAPNGWSE
GECKGKAGWFPSAYVEQRDKAPASKVIEPGLLTT

Transcript Sequence

Transcript ID

Os03t0266700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:8819434:8824333:1 gene:Os03g0266700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Src homology-3 domain containing protein. (Os03t0266700-01)
Sequence

GGCTGGCCTAGTGTAGTGCGCGCTGTACTGTTCCCACGTCGCGTCGAGGCATCGGTTCGA
GCGAGCGCGCGCGCGACGCGGGCGAGGCTCCGGCTCGATTCCGTCGCCACCCTGTGACAG
CAGCAGCCACCGCCCACCGCCGCCGCCGCTTTCTGGAGGCTTCCCGTTGGCTCGTGGTTG
CGGGGGGACTCGCGGAGTCGCGGTTGCGAGTTGGCTGCCTGCTACTCTGCTAGTGTGCTA
AGCCTGCCTTTTAGTTAGTCTGGGAGCACGCTACTGCTACTTTCCCCAATCCAATCCAAT
CCAATCCAATCCTCGCCGGCGTTGGTTCGCTCGATCGGCGCGGCGCGGATGGAGACGCTC
AGGAAGCAGGCCAGCAAGCTCAGGGAGCACGTCGCCAAGCAGCAGCAGGCTGTTCGGAAG
CAGTTCAGTGCACGCTATAACCAGGATCCTTCTCTTGTCGATGAGGCGGAACTTGAGTGC
CACCAGAATCTTCAGAGGCTATACAACAGTACAAGAGCTGCTAAACATTTCCAACGAAGT
ATTGTACGAGGTGTCGAGGGTTTCATTGCTGTCAGCACCAAACAGATGGAGATTGTGAAA
AAGCTAGCTGAGGATTGTTGCAGATATGGAAACGACAATCAAAATTTTGGTTTTATTCTT
GCAAGGGCTTCAGTTGAGTTTGGTAATTCCCATAGCCAAATGGAGAAAGAGCGGGAGAAT
CTTCTTAAATTTCTTGGAGAGCAGGTTTTTGAGCCTCTTCGAGAAATGATAATGAGTGCT
CCTCTTGAAGATGCCCGCCTGTTAACTTACCGTTATCAACGGATCAGACAAGATATGGAA
TCTCAGATAGCTGATGTGATGAGAAAGCAACTGAAGTCCAAGGAGAGTAGCGGTAATGCA
GATAATTCTGTGAAACTGCAACATGCAGAATCAAAATTATCTGAGCTCCGAACTACATTA
TCAGCATTAGGAAGAGAGGCAACTGCAGCTATGGAGGCTGTGGAGGTTCAGCAACAACAG
GTTACCTTTGACCGTCTCCTTGCAATGGTTGATGCTGAGAGAGCTTATCATCAGAATGCT
GCTGATATTCTGAACAAACTTCACGACGAGATGGTCCAAGCAAAACACCATGATGAGCCG
GAAAACCATTATGATGAGACATCATCAGATCCTAAAACAGCTGCAACACATGAGCATTCA
CGTAGCACATCCGAAGATCACATATTTACTAATACTAGTGAACCTACAAGGACTGAAACC
AGTGAACCTACAAGGACTGAAACTAGTGAACCTACAAGGAATGGTCAGGAAGTGCATTAT
GTTGGAGAGGTAATCCATCCATTCGATGCTCAGGCTGATGGCGAGCTCAGTATTTCCGTG
GGAGATTATGTTGTGGTCCGGCAGGTGGCTCCCAATGGGTGGTCTGAAGGGGAATGCAAA
GGAAAAGCTGGCTGGTTCCCATCTGCCTATGTGGAGCAGAGGGACAAAGCCCCGGCAAGT
AAGGTGATAGAGCCTGGATTGCTGACTACTTAATCTCTCTCATACTAATAGTTGCTTTCA
TCGCCCTGTTTCCCCTGTACATGGGGTTTTTCTTGAGTGAATAGCATTTTGTAGAACTTC
TACCTTTCTGTGCATATTCATGTGCTTCTAGGCTTGCTGTTACCCAATAATTGTATGTAA
AATTTATTGTTTTGCCTTTAGCATCTCGTTTTCTCTTTCTTTCACAATGTATAGAGCTAT
TGGTCCTGGGATGCTGTAACCTTCCCTTTCTTTTGTGGAAAGCGTGCTTCCTGCCAAAAT
TGTGAGATGGATTTCAGAACAGTCTCACTGGCCTTGTTCCTTC