Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0265500-02
CDS Infomation	cds chromosome:IRGSP-1.0:3:8764065:8766853:1 gene:Os03g0265500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:coronatine insensitive 2 description:COI1 homolog, Jasmonate signaling (Os03t0265500-01);Similar to Coronatine-insensitive 1. (Os03t0265500-02)
Sequence	ATGGGAGGCGAGGCGGGGGAGCGGCGGCTGGGGAGGGCGATGAGCTTCGGGATCCCGGAC GTGGCGCTGGGGCTGGTGATGGGGTTCGTGGAGGACCCCTGGGACCGGGACGCCATCTCG CTCGTGTGCCGCCACTGGTGCAGGGTCGACGCGCTCAGCCGCAAGCACGTCACCGTCGCC ATGGCGTACTCCACCACGCCCGACCGGCTGTTCAGGCGGTTCCCCTGCCTCGAGTCGCTC AAGCTCAAGGCCAAGCCCCGGGCGGCCATGTTCAACCTCATCCCCGAGGACTGGGGCGGC TCCGCCTCGCCGTGGATCCGCCAGCTCTCGGCCTCGTTCCACTTCCTCAAGGCGCTCCAC CTCCGCAGGATGATCGTGTCCGACGACGACCTCGACGTCCTCGTCCGCGCCAAGGCGCAC ATGCTCTCCTCGTTCAAGCTTGACCGCTGCTCTGGCTTCTCAACATCCTCCCTCGCCCTC GTCGCCCGCACCTGCAAGAAACTTGAAACGTTATTCCTGGAGGATAGCATAATTGCTGAG AAAGAAAATGACGAATGGATTCGGGAGCTTGCTACCAACAATAGTGTCCTTGAGACACTG AATTTCTTTTTGACAGATCTCAGGGCATCCCCAGCATATCTTACCCTCCTTGTGCGCAAT TGTCGAAGGCTGAAAGTTTTGAAGATTAGTGAGTGCTTCATGCTTGACCTGGTTGATTTG TTCCGTACAGCAGAAATATTACAAGACTTTGCCGGTGGTTCCTTTGATGATCAGGGTCAA GTTGAAGAGAGTAGAAATTATGAAAACTACTATTTCCCTCCTTCATTGCTCCGCTTGAGT TTGCTCTACATGGGAACAAAAGAGATGCAAGTGCTATTTCCATATGGTGCTGCACTCAAG AAGTTGGATCTTCAATTCACATTCCTTTCCACAGAGGATCACTGTCAGCTGGTCCAGCGC TGCCCAAATCTGGAAATCTTAGAGGTGAGGGATGTCATAGGGGATCGTGGGTTAGAAGTT GTTGCACAAACCTGCAAGAAATTACAGAGACTTCGAGTAGAGAGAGGAGATGATGATCAA GGAGGTCTTGAGGATGAACATGGTATGGTTACACAGGTGGGGTTGATGGCTGTAGCTCAA GGCTGCCCTCATTTAGAATACTGGGCAGTGCATGTCACTGACATTACAAATGCTGCTCTA GAAGCCATCGGTACATACAGCAGCAGTCTTAACGATTTCCGGCTTGTCCTGCTTGATAGA GAAGCAAATATAACAGAATCACCCCTTGACAATGGGGTGCGTGCTTTACTGAGAGGCTGC ACCAAGCTCCGGAGGTTCGCATTTTATGTAAGACCTGGGGCTCTATCAGATGTTGGCCTT GGGTACATTGGTGAATTTAGTAAGACAATCCGTTACATGTTACTTGGGAATGTTGGGGAG TCTGACCAAGGACTGCTTCAACTCTCAACAGGATGCCCAAGCTTGCAGAAATTGGAGCTG AGGGGTTGTTTCTTCAGTGAACGTGCATTGGCTGTTGCTGTTTTACAACTTAAATCACTG AGATACCTATGGGTGCAAGGATACAAGGCATCTCCCAATGGCACTGATCTAATGGCAATG GTGCGACCCTTCTGGAACATTGAGATTATTGCCCCGAATCAAGATGAAGTTTGCCCGGAC GGTCAGGCACAGATTCTTGCATATTACTCACTTGCAGGAATGAGATCAGATTACCCTCAC TCAGTAATTCCCCTCTATCCTTCGGTTTGA

Peptide Sequence

PEP ID	Os03t0265500-02
PEP Infomation	pep chromosome:IRGSP-1.0:3:8764065:8766853:1 gene:Os03g0265500 transcript:Os03t0265500-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:coronatine insensitive 2 description:COI1 homolog, Jasmonate signaling (Os03t0265500-01);Similar to Coronatine-insensitive 1. (Os03t0265500-02)
Sequence	MGGEAGERRLGRAMSFGIPDVALGLVMGFVEDPWDRDAISLVCRHWCRVDALSRKHVTVA MAYSTTPDRLFRRFPCLESLKLKAKPRAAMFNLIPEDWGGSASPWIRQLSASFHFLKALH LRRMIVSDDDLDVLVRAKAHMLSSFKLDRCSGFSTSSLALVARTCKKLETLFLEDSIIAE KENDEWIRELATNNSVLETLNFFLTDLRASPAYLTLLVRNCRRLKVLKISECFMLDLVDL FRTAEILQDFAGGSFDDQGQVEESRNYENYYFPPSLLRLSLLYMGTKEMQVLFPYGAALK KLDLQFTFLSTEDHCQLVQRCPNLEILEVRDVIGDRGLEVVAQTCKKLQRLRVERGDDDQ GGLEDEHGMVTQVGLMAVAQGCPHLEYWAVHVTDITNAALEAIGTYSSSLNDFRLVLLDR EANITESPLDNGVRALLRGCTKLRRFAFYVRPGALSDVGLGYIGEFSKTIRYMLLGNVGE SDQGLLQLSTGCPSLQKLELRGCFFSERALAVAVLQLKSLRYLWVQGYKASPNGTDLMAM VRPFWNIEIIAPNQDEVCPDGQAQILAYYSLAGMRSDYPHSVIPLYPSV

Transcript Sequence

Transcript ID	Os03t0265500-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:8764065:8766853:1 gene:Os03g0265500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:coronatine insensitive 2 description:COI1 homolog, Jasmonate signaling (Os03t0265500-01);Similar to Coronatine-insensitive 1. (Os03t0265500-02)
Sequence	ACCACACCACACCACCCCATCTCCCATCTCACCATCCCCCTTTCCCACCCTCCCGTGCGA ACACACCCGCGGCGCGGAGCCCAGATCGGGATCGCGACGGATCGGCGGCGGCGGCGGCGA TGGGAGGCGAGGCGGGGGAGCGGCGGCTGGGGAGGGCGATGAGCTTCGGGATCCCGGACG TGGCGCTGGGGCTGGTGATGGGGTTCGTGGAGGACCCCTGGGACCGGGACGCCATCTCGC TCGTGTGCCGCCACTGGTGCAGGGTCGACGCGCTCAGCCGCAAGCACGTCACCGTCGCCA TGGCGTACTCCACCACGCCCGACCGGCTGTTCAGGCGGTTCCCCTGCCTCGAGTCGCTCA AGCTCAAGGCCAAGCCCCGGGCGGCCATGTTCAACCTCATCCCCGAGGACTGGGGCGGCT CCGCCTCGCCGTGGATCCGCCAGCTCTCGGCCTCGTTCCACTTCCTCAAGGCGCTCCACC TCCGCAGGATGATCGTGTCCGACGACGACCTCGACGTCCTCGTCCGCGCCAAGGCGCACA TGCTCTCCTCGTTCAAGCTTGACCGCTGCTCTGGCTTCTCAACATCCTCCCTCGCCCTCG TCGCCCGCACCTGCAAGAAACTTGAAACGTTATTCCTGGAGGATAGCATAATTGCTGAGA AAGAAAATGACGAATGGATTCGGGAGCTTGCTACCAACAATAGTGTCCTTGAGACACTGA ATTTCTTTTTGACAGATCTCAGGGCATCCCCAGCATATCTTACCCTCCTTGTGCGCAATT GTCGAAGGCTGAAAGTTTTGAAGATTAGTGAGTGCTTCATGCTTGACCTGGTTGATTTGT TCCGTACAGCAGAAATATTACAAGACTTTGCCGGTGGTTCCTTTGATGATCAGGGTCAAG TTGAAGAGAGTAGAAATTATGAAAACTACTATTTCCCTCCTTCATTGCTCCGCTTGAGTT TGCTCTACATGGGAACAAAAGAGATGCAAGTGCTATTTCCATATGGTGCTGCACTCAAGA AGTTGGATCTTCAATTCACATTCCTTTCCACAGAGGATCACTGTCAGCTGGTCCAGCGCT GCCCAAATCTGGAAATCTTAGAGGTGAGGGATGTCATAGGGGATCGTGGGTTAGAAGTTG TTGCACAAACCTGCAAGAAATTACAGAGACTTCGAGTAGAGAGAGGAGATGATGATCAAG GAGGTCTTGAGGATGAACATGGTATGGTTACACAGGTGGGGTTGATGGCTGTAGCTCAAG GCTGCCCTCATTTAGAATACTGGGCAGTGCATGTCACTGACATTACAAATGCTGCTCTAG AAGCCATCGGTACATACAGCAGCAGTCTTAACGATTTCCGGCTTGTCCTGCTTGATAGAG AAGCAAATATAACAGAATCACCCCTTGACAATGGGGTGCGTGCTTTACTGAGAGGCTGCA CCAAGCTCCGGAGGTTCGCATTTTATGTAAGACCTGGGGCTCTATCAGATGTTGGCCTTG GGTACATTGGTGAATTTAGTAAGACAATCCGTTACATGTTACTTGGGAATGTTGGGGAGT CTGACCAAGGACTGCTTCAACTCTCAACAGGATGCCCAAGCTTGCAGAAATTGGAGCTGA GGGGTTGTTTCTTCAGTGAACGTGCATTGGCTGTTGCTGTTTTACAACTTAAATCACTGA GATACCTATGGGTGCAAGGATACAAGGCATCTCCCAATGGCACTGATCTAATGGCAATGG TGCGACCCTTCTGGAACATTGAGATTATTGCCCCGAATCAAGATGAAGTTTGCCCGGACG GTCAGGCACAGATTCTTGCATATTACTCACTTGCAGGAATGAGATCAGATTACCCTCACT CAGTAATTCCCCTCTATCCTTCGGTTTGAGTGTATATGTCTGATACCAGGTTGCGAAACT CACACTCTAGTATAGGCCGATATTGTTCCAAATTCTACAGTTTGCTGCTCTTATTCTGTT TAGCAATGAGCACAGAACAAATGACAAATAAAAGCAGGATAGCTGTTAGTTCGAGGAACA TATTATAACATCTTGGGACTAAGAATTTTATTGCATATCTGAGGGGTATCACTTCTGCGA AAGCTCAGCTCAATTGGCCAGCACGGATATGTAAACTTCTCCATTTTGATTAGGATCGGA CACACAATTTTGTAATAATGTTCCTTGTTCAATGTTTAGTAGTATTATTTGACTCTTTAG CTTTGTGTCACATTGTCTCTTGGAAGATCGCCGCACTGTGTTCTAATAAGTCATTCGCTG TACAATATTTTTATCATCC