Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0265200-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:8741914:8744127:-1 gene:Os03g0265200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Josephin-like protein. (Os03t0265200-01)
Sequence

ATGGAATCGGGGCCCAAATCGGAAGCAAAACAAGACGAGGAGGGATCGAGTGCGATGGGC
GGCGGCGGCGGCAGCAGCAGAAGCAGCAAGGTGTATCACGAGAGGCAACGGCTGCAGTTC
TGTCTCCTCCACGCCCTCAACAACCTTATGCAGGAAAAGGAATCTTTCACCCGAGCTGAG
TTAGATGGGATTGCTGGAAATCTCGTCCAGATTGATCCAAATAAGGAGCACTGGACTCCT
ATGTCATTGATTTTTAAGCCCCACCACAACGTATTCACCGGGAACTATGATGTAAATGTA
CTCATCACAGCATTAGAAGCTAGAAAGAAGAAGGTAATCTGGCATGATCATCGGAAAGGG
GCTTCTTCAATCGATCTGGATGCAGATGCATTGTTTGGTCTGATGATCAATGTACCCGTC
AGGAGGTTCAGAGGGCTTTGGACTGGCCGGCATTGGGTGGCAATTCGAAGCATTAATGGC
ACTTGGTTTAATTTGGATAGTGATTTTTCTGCACCCAAGGAGTTTCAGGACAAAGAAAAA
CTTATTGCATTTCTAGACAGCATTCTCAGTCAAGGTGGAGAAGTCATGATAGTGCTGCAA
GATGAATAA

Peptide Sequence

PEP ID

Os03t0265200-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:8741914:8744127:-1 gene:Os03g0265200 transcript:Os03t0265200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Josephin-like protein. (Os03t0265200-01)
Sequence

MESGPKSEAKQDEEGSSAMGGGGGSSRSSKVYHERQRLQFCLLHALNNLMQEKESFTRAE
LDGIAGNLVQIDPNKEHWTPMSLIFKPHHNVFTGNYDVNVLITALEARKKKVIWHDHRKG
ASSIDLDADALFGLMINVPVRRFRGLWTGRHWVAIRSINGTWFNLDSDFSAPKEFQDKEK
LIAFLDSILSQGGEVMIVLQDE

Transcript Sequence

Transcript ID

Os03t0265200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:8741914:8744127:-1 gene:Os03g0265200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Josephin-like protein. (Os03t0265200-01)
Sequence

AAAGAAGGGAAGGACGACCCAGAAGTTCCTGCCGGGGGTAGCGGCGCGGCGGCCGTCGGG
CGGCGGCGAGAAGAAAGAGGAGGAATCTTGGGCCGCTGTAATCTTTCCTTCGAACCCGAA
CCCTCCTTCTCCTCCCTGCACCATCTCCGCATGGAATCGGGGCCCAAATCGGAAGCAAAA
CAAGACGAGGAGGGATCGAGTGCGATGGGCGGCGGCGGCGGCAGCAGCAGAAGCAGCAAG
GTGTATCACGAGAGGCAACGGCTGCAGTTCTGTCTCCTCCACGCCCTCAACAACCTTATG
CAGGAAAAGGAATCTTTCACCCGAGCTGAGTTAGATGGGATTGCTGGAAATCTCGTCCAG
ATTGATCCAAATAAGGAGCACTGGACTCCTATGTCATTGATTTTTAAGCCCCACCACAAC
GTATTCACCGGGAACTATGATGTAAATGTACTCATCACAGCATTAGAAGCTAGAAAGAAG
AAGGTAATCTGGCATGATCATCGGAAAGGGGCTTCTTCAATCGATCTGGATGCAGATGCA
TTGTTTGGTCTGATGATCAATGTACCCGTCAGGAGGTTCAGAGGGCTTTGGACTGGCCGG
CATTGGGTGGCAATTCGAAGCATTAATGGCACTTGGTTTAATTTGGATAGTGATTTTTCT
GCACCCAAGGAGTTTCAGGACAAAGAAAAACTTATTGCATTTCTAGACAGCATTCTCAGT
CAAGGTGGAGAAGTCATGATAGTGCTGCAAGATGAATAACAATGCTGCTTCAAATGCCAA
AAGTCTACAGCAATAGCTTGAAGCTTCTCATATGTGACTTGCAGTTGTTACTTGTTGTTA
CCCGTACATACTTCAGGACTGATTTTGTAGTGAGATGCATCTGCAGCTGCAATTCCTCTG
AAAACTTACCATTTTGTTGGTGAGCATAATGGATAGGGCCATTCAGTACATGGAAGGTCC
AATTCTCCAAACGTACAGCTGATGATTTTCTACTACTGTCACGGTCCATGGCCTTTCTGT
TTAATTGTTCAGCAAGTCAAATGCAAACAAGTAATGAGCAGAGACAGAAAACCTGCTTGC
TGAGACATCGACTGTGCACAATTACATGTTTCTTATGCCATAGTGCATGAAAACCACCTT
TTTTCTTGGCGGAGGGAGTAATATTGTGGTGTTAATCAATTGTCAATGAAAACATGTTGC
TTGTGCTGTTTGCATGGATATCACCTTTTTTTTTGGGGCGGAGGGGATTGTGTTGATAGA
GATAGTGTAGTTTTGCTGCAATAGTTGTATATGTTATGTGGAAAACCACATTAAGTCCGC
ATTTTGGGGCACTCATACAATTTGTTGATTCATCTTGTAAAATGGAAAGTTGTAGCTTTG
TTTTAAGTAGTGTTAGTTTTGCTGCAATAGTTGTATATGTTCTGTGGAAAACCATATTAA
GTCC