Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0263500-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:8660232:8663021:-1 gene:Os03g0263500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Splicing factor 3A subunit 2 (Spliceosome associated protein 62) (SAP 62) (SF3a66). (Os03t0263500-01)
Sequence	ATGGATCGCGAGTGGGGCTCCAAGCCCGGCAGCGGCGGCGCCGCCTCCGCCCAGAATGAG GCCATCGACCGGCGGGAGCGCCTCCGCCGCCTCGCCCTCGAGACCATCGACCTCGCCAAG GACCCCTACTTCATGCGCAACCACCTCGGCAGCTACGAGTGCAAGCTGTGCCTGACGCTG CACAACAACGAGGGGAACTACCTGGCTCACACGCAGGGGAAGCGGCACCAGACCAACCTC GCCAAGCGTGCCGCCCGCGAGGCCAAGGACGCGCCCGCGCAGCCCCAGCCCAACAAGAGA AAGTTCGCGCCCCGCAAGTCCGTTAAGATTGGAAGACCTGGGTATCAGGTGACTAAGCAG TATGATCCTGACATGAAGCAACACTCATTTCTTTTTGAGATTGGTTATCCTGAAATTGAA GAAAACAGCAAGCCAAGGCACCGTTTCATGGCATCATATGAACAGAAAGTCGAATCTTGG GATAAAAAGTATCAATATCTACTTTTTGCAGCAGAGCCCTATGAAATTATTGGCTTTAAG ATACCAAGCGCAGAGATCGACAAGTCAGCAGATAAATTCTTCAACTATTGGGATCCAGAC AAGAAACAGTACATTCTCCAACTATACTTCAAAACAAGACAACCAGAAGCTAATAAGCCG CCTGCGGCTCCTGGGACTTTGCCAAATGGATCTGGAGGTCCACCACGCCCACCCCCACCG CAGGTTCCGCCACCCCCGCCACAGGCTCCGCCGCCGCCTCCACCAAATGCACCTATGGGT ATGCCCCCAAGGATCCCACCCCCACCTGTTGGTGGTACTCAACCTCCACCACCACCGCCC CCACTTGCAAATGGACCTCCACGATCAATCCCACCCCCACCTATGACCGGTGGTGCAATG GCTAACTTCACTCCTGGAGCACCTCCTCGTCCTCCAATGCAAGGATTTCCTGGGCCGCAG CAGTAG

Peptide Sequence

PEP ID	Os03t0263500-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:8660232:8663021:-1 gene:Os03g0263500 transcript:Os03t0263500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Splicing factor 3A subunit 2 (Spliceosome associated protein 62) (SAP 62) (SF3a66). (Os03t0263500-01)
Sequence	MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL HNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPAQPQPNKRKFAPRKSVKIGRPGYQVTKQ YDPDMKQHSFLFEIGYPEIEENSKPRHRFMASYEQKVESWDKKYQYLLFAAEPYEIIGFK IPSAEIDKSADKFFNYWDPDKKQYILQLYFKTRQPEANKPPAAPGTLPNGSGGPPRPPPP QVPPPPPQAPPPPPPNAPMGMPPRIPPPPVGGTQPPPPPPPLANGPPRSIPPPPMTGGAM ANFTPGAPPRPPMQGFPGPQQ

Transcript Sequence

Transcript ID	Os03t0263500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:8660232:8663021:-1 gene:Os03g0263500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Splicing factor 3A subunit 2 (Spliceosome associated protein 62) (SAP 62) (SF3a66). (Os03t0263500-01)
Sequence	ATACGAGCAGGACAGCACAGGTCGAGACTCGAGAGGCGGCGAGACCGAGCGGGGACGCCA TGGATCGCGAGTGGGGCTCCAAGCCCGGCAGCGGCGGCGCCGCCTCCGCCCAGAATGAGG CCATCGACCGGCGGGAGCGCCTCCGCCGCCTCGCCCTCGAGACCATCGACCTCGCCAAGG ACCCCTACTTCATGCGCAACCACCTCGGCAGCTACGAGTGCAAGCTGTGCCTGACGCTGC ACAACAACGAGGGGAACTACCTGGCTCACACGCAGGGGAAGCGGCACCAGACCAACCTCG CCAAGCGTGCCGCCCGCGAGGCCAAGGACGCGCCCGCGCAGCCCCAGCCCAACAAGAGAA AGTTCGCGCCCCGCAAGTCCGTTAAGATTGGAAGACCTGGGTATCAGGTGACTAAGCAGT ATGATCCTGACATGAAGCAACACTCATTTCTTTTTGAGATTGGTTATCCTGAAATTGAAG AAAACAGCAAGCCAAGGCACCGTTTCATGGCATCATATGAACAGAAAGTCGAATCTTGGG ATAAAAAGTATCAATATCTACTTTTTGCAGCAGAGCCCTATGAAATTATTGGCTTTAAGA TACCAAGCGCAGAGATCGACAAGTCAGCAGATAAATTCTTCAACTATTGGGATCCAGACA AGAAACAGTACATTCTCCAACTATACTTCAAAACAAGACAACCAGAAGCTAATAAGCCGC CTGCGGCTCCTGGGACTTTGCCAAATGGATCTGGAGGTCCACCACGCCCACCCCCACCGC AGGTTCCGCCACCCCCGCCACAGGCTCCGCCGCCGCCTCCACCAAATGCACCTATGGGTA TGCCCCCAAGGATCCCACCCCCACCTGTTGGTGGTACTCAACCTCCACCACCACCGCCCC CACTTGCAAATGGACCTCCACGATCAATCCCACCCCCACCTATGACCGGTGGTGCAATGG CTAACTTCACTCCTGGAGCACCTCCTCGTCCTCCAATGCAAGGATTTCCTGGGCCGCAGC AGTAGATGACCCAAGCGACAACAACTGAGGTCGGGCTACAAATGTTGCAATGATTGCCTA GTTTGCTGTAGAATGCCTTTTGACCCAAATTTGTATGTTGTCAAATACATTATATATTTA CATGTACTCTTAGACTATAGTATTGTCGATTTTAAGAAATTTTCCACCTTGATACTTTTG ATACTTCTATTCAAAGCACTTGGTGTCT