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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0262700-02
CDS Infomation

cds chromosome:IRGSP-1.0:3:8623354:8624549:1 gene:Os03g0262700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Harpin-induced 1 domain containing protein. (Os03t0262700-01);Harpin-induced 1 domain containing protein. (Os03t0262700-02)
Sequence

ATGACGACCCGATCCAACGGCGAGCACCACCACGGGCCGCCCTCGTACCAGCAGCGGCGC
CCGCACTACGGGGGCGGGTACGGCGGCGGGTCGGCCTCGTTCCGCGGCTGCTGCTGCTGC
ATCTTCCTGCTGCTCACCTTCCTGGCCCTCCTCGCGCTGGCCGTCGCGCTCGTCGTGGTG
CTGGTGGTGAAGCCGCGGAAGCCGCAGTTCGACCTCAACCAGGTGTCCGTCCAGTACCTC
CTCGTCACCCCGCCGTCCTCCGCCGCCTCCGCCGTGGGGGGGACCGTGGCCGCCGCGGTC
CCCGCCGCGGCCTACCTCTCCCTCAACATCACGCTCCTCTTCACCGCCGTGAACCCCAAC
AAGGTCGGCATCCGCTACGGCGCCACGGCGTTCGACGTCATGTACCACGGCGTGCCGCTC
GGGGTGGCGGCCGTGCCCGGGTTCGAGCAGCCGGCGCACAGCACCCGCCTGCTCCAGACC
CGCGTCATCGTCGACCGCTTCAACGTGCTCCAGGCCGACGCCCAGGACCTCGTCCGCGAC
GCCGCGATCAGCGACCGCGTCGACCTCCGCATCACCGGCGACGTCGGCGCCAAGATCCTC
GTGCTCGGCTTCTCCTCCCCAAAAGTCCAGGTGTCGGTGGATTGCGCGATCGCCATCAGT
CCGAGGAGGCAGTCACTGACATACAAGCAATGTGGCGTGGATGGCCTAAGCGTCTAG

Peptide Sequence

PEP ID

Os03t0262700-02
PEP Infomation

pep chromosome:IRGSP-1.0:3:8623354:8624549:1 gene:Os03g0262700 transcript:Os03t0262700-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Harpin-induced 1 domain containing protein. (Os03t0262700-01);Harpin-induced 1 domain containing protein. (Os03t0262700-02)
Sequence

MTTRSNGEHHHGPPSYQQRRPHYGGGYGGGSASFRGCCCCIFLLLTFLALLALAVALVVV
LVVKPRKPQFDLNQVSVQYLLVTPPSSAASAVGGTVAAAVPAAAYLSLNITLLFTAVNPN
KVGIRYGATAFDVMYHGVPLGVAAVPGFEQPAHSTRLLQTRVIVDRFNVLQADAQDLVRD
AAISDRVDLRITGDVGAKILVLGFSSPKVQVSVDCAIAISPRRQSLTYKQCGVDGLSV

Transcript Sequence

Transcript ID

Os03t0262700-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:8623354:8624549:1 gene:Os03g0262700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Harpin-induced 1 domain containing protein. (Os03t0262700-01);Harpin-induced 1 domain containing protein. (Os03t0262700-02)
Sequence

AAATGCTCCATTAGCTCCCGAAATCCAAACCACCCCCCTCCTCCCCTCACGGGCTCACGG
CCTCACCCACCCACCAACCCATCCATCCAACTCCGCGGCGGCGGCGGCGGCGATGACGAC
CCGATCCAACGGCGAGCACCACCACGGGCCGCCCTCGTACCAGCAGCGGCGCCCGCACTA
CGGGGGCGGGTACGGCGGCGGGTCGGCCTCGTTCCGCGGCTGCTGCTGCTGCATCTTCCT
GCTGCTCACCTTCCTGGCCCTCCTCGCGCTGGCCGTCGCGCTCGTCGTGGTGCTGGTGGT
GAAGCCGCGGAAGCCGCAGTTCGACCTCAACCAGGTGTCCGTCCAGTACCTCCTCGTCAC
CCCGCCGTCCTCCGCCGCCTCCGCCGTGGGGGGGACCGTGGCCGCCGCGGTCCCCGCCGC
GGCCTACCTCTCCCTCAACATCACGCTCCTCTTCACCGCCGTGAACCCCAACAAGGTCGG
CATCCGCTACGGCGCCACGGCGTTCGACGTCATGTACCACGGCGTGCCGCTCGGGGTGGC
GGCCGTGCCCGGGTTCGAGCAGCCGGCGCACAGCACCCGCCTGCTCCAGACCCGCGTCAT
CGTCGACCGCTTCAACGTGCTCCAGGCCGACGCCCAGGACCTCGTCCGCGACGCCGCGAT
CAGCGACCGCGTCGACCTCCGCATCACCGGCGACGTCGGCGCCAAGATCCTCGTGCTCGG
CTTCTCCTCCCCAAAAGTCCAGGTGTCGGTGGATTGCGCGATCGCCATCAGTCCGAGGAG
GCAGTCACTGACATACAAGCAATGTGGCGTGGATGGCCTAAGCGTCTAGCAGCAGCAACC
AACCACCACACCATCGCAGCAACAGCAGCAGCAGAAGAAGAAGAAGGATGCAGAAGGCTT
AATCTAATGGAGATAGATAAGTGGATGTGACCCGTGTTTGTCGATTCTAATCTCTCTTTC
TCTATCTAATCCTGGGTTCCGATTCCTGTACGTGGGGGGTAAATTTTGAGCTCTCTCACC
TCACCCTAGAGGAGGAGGTCGCCGCTGATTTTTGTGAATTACTGTCCGGTAATTATCACT
ATCGCCCAATTCGCC