Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0260600-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:8458131:8461066:1 gene:Os03g0260600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 040 description:Helix-loop-helix DNA-binding domain containing protein. (Os03t0260600-01)
Sequence	ATGGGTGCTCATGGAGACCACCGCCACCACCACCACCATCAAGAAGCCGGGGTGCTCGTC GACGAGGAGGAGGAGGAGGTGATCGAGCAGGCTTGCGGTGGCCCGACGAGCGGCGTGGTG GAGCAAGAGGTGGGGGGAGACGGTGGTGGAGTGTGCCAAGATGCTGCCGGCATGGTGTTC GAGGCGACCAGTAGCGTCGGGAGCGTGAGCGCCACCATGGGGCCGCCGCCGATCATGTGC TGGCCACCGCCGGCGCAGCCTGTCCACGGTGCAATCCACCACCACCACAACCTAGGCGGC GGCGGCGGCCAGCAGAGCCCGTTCTTCCCGCTGCTGCCGCCCCTGCCCCCTCAGCCCCCG CCGCCACCCCCGTTCTTCGCCGACTTCTACGCGCGGCGGGCGCTCCAGTACGCGTACGAC CACTCCGGCGGCGCGTCGTCGTCGTCCGACCCGCTCGGCCTCGGCGGGCTCTACATGGGT CACCACGGCTCCCACGTCGCCGGCATGATGATGCCGCCGCCCTTCGCTCCGTCGCCGTTC GGCGACCTCGGCCGGATGACCGCGCAGGAGATCATGGACGCCAAGGCGCTGGCCGCGTCC AAGAGCCACAGCGAGGCCGAGCGCCGCCGCCGCGAGCGGATCAACGCGCACCTCGCCCGC CTCCGCAGCCTCCTCCCCAACACAACCAAGACGGACAAGGCGTCGCTGCTCGCGGAGGTG ATCCAGCACGTCAAGGAGCTGAAGCGGCAGACGTCGGAGATCACGGAGGAGGCGTGCCCG CTCCCCACCGAGTCGGACGAGCTCACCGTCGACGCGTCGAGCGACGAGGACGGGCGCCTC GTCGTGCGCGCGTCGCTCTGCTGCGACGACCGCACCGACCTCCTGCCGGACCTCATCCGC GCGCTCAAGGCGCTCCGGCTGCGCGCGCTCAAGGCCGAGATCACCACACTCGGCGGCCGC GTCAAGAACGTGCTCGTCGTCACCGGGGACGACAGCGCCGCCGCCGCCGCCTGCGCGGGG ACGGACGGGGACGGCGAGCAGCAGGAGGAGGCGATGCAGGCGCCCATGTCGCCGCAGCAC ACGGTCGCGTCCATCCAGGACGCGCTGCGCGCCGTCATGGAGCGGACGGCATCGGCCACC GAGGAGTCCGGGGGGTCGGGCGCCGGCGGTGGGCTCAAGCGGCAGCGCACCACGAGCCTC TCGGCGATCCTAGAGAACAGGTCTATCTAA

Peptide Sequence

PEP ID	Os03t0260600-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:8458131:8461066:1 gene:Os03g0260600 transcript:Os03t0260600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 040 description:Helix-loop-helix DNA-binding domain containing protein. (Os03t0260600-01)
Sequence	MGAHGDHRHHHHHQEAGVLVDEEEEEVIEQACGGPTSGVVEQEVGGDGGGVCQDAAGMVF EATSSVGSVSATMGPPPIMCWPPPAQPVHGAIHHHHNLGGGGGQQSPFFPLLPPLPPQPP PPPPFFADFYARRALQYAYDHSGGASSSSDPLGLGGLYMGHHGSHVAGMMMPPPFAPSPF GDLGRMTAQEIMDAKALAASKSHSEAERRRRERINAHLARLRSLLPNTTKTDKASLLAEV IQHVKELKRQTSEITEEACPLPTESDELTVDASSDEDGRLVVRASLCCDDRTDLLPDLIR ALKALRLRALKAEITTLGGRVKNVLVVTGDDSAAAAACAGTDGDGEQQEEAMQAPMSPQH TVASIQDALRAVMERTASATEESGGSGAGGGLKRQRTTSLSAILENRSI

Transcript Sequence

Transcript ID	Os03t0260600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:8458131:8461066:1 gene:Os03g0260600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 040 description:Helix-loop-helix DNA-binding domain containing protein. (Os03t0260600-01)
Sequence	CATCCATCTCCCTCCCACACGCAAGCCCCGGGTACTACGCTGCCCGTCCAGCGTTCAATC GATCGATCGATCCCCGCGGCTCGGTTTGTGTTGCGTTCTTCCAGATCGATTTGATAGATG GGTGCTCATGGAGACCACCGCCACCACCACCACCATCAAGAAGCCGGGGTGCTCGTCGAC GAGGAGGAGGAGGAGGTGATCGAGCAGGCTTGCGGTGGCCCGACGAGCGGCGTGGTGGAG CAAGAGGTGGGGGGAGACGGTGGTGGAGTGTGCCAAGATGCTGCCGGCATGGTGTTCGAG GCGACCAGTAGCGTCGGGAGCGTGAGCGCCACCATGGGGCCGCCGCCGATCATGTGCTGG CCACCGCCGGCGCAGCCTGTCCACGGTGCAATCCACCACCACCACAACCTAGGCGGCGGC GGCGGCCAGCAGAGCCCGTTCTTCCCGCTGCTGCCGCCCCTGCCCCCTCAGCCCCCGCCG CCACCCCCGTTCTTCGCCGACTTCTACGCGCGGCGGGCGCTCCAGTACGCGTACGACCAC TCCGGCGGCGCGTCGTCGTCGTCCGACCCGCTCGGCCTCGGCGGGCTCTACATGGGTCAC CACGGCTCCCACGTCGCCGGCATGATGATGCCGCCGCCCTTCGCTCCGTCGCCGTTCGGC GACCTCGGCCGGATGACCGCGCAGGAGATCATGGACGCCAAGGCGCTGGCCGCGTCCAAG AGCCACAGCGAGGCCGAGCGCCGCCGCCGCGAGCGGATCAACGCGCACCTCGCCCGCCTC CGCAGCCTCCTCCCCAACACAACCAAGACGGACAAGGCGTCGCTGCTCGCGGAGGTGATC CAGCACGTCAAGGAGCTGAAGCGGCAGACGTCGGAGATCACGGAGGAGGCGTGCCCGCTC CCCACCGAGTCGGACGAGCTCACCGTCGACGCGTCGAGCGACGAGGACGGGCGCCTCGTC GTGCGCGCGTCGCTCTGCTGCGACGACCGCACCGACCTCCTGCCGGACCTCATCCGCGCG CTCAAGGCGCTCCGGCTGCGCGCGCTCAAGGCCGAGATCACCACACTCGGCGGCCGCGTC AAGAACGTGCTCGTCGTCACCGGGGACGACAGCGCCGCCGCCGCCGCCTGCGCGGGGACG GACGGGGACGGCGAGCAGCAGGAGGAGGCGATGCAGGCGCCCATGTCGCCGCAGCACACG GTCGCGTCCATCCAGGACGCGCTGCGCGCCGTCATGGAGCGGACGGCATCGGCCACCGAG GAGTCCGGGGGGTCGGGCGCCGGCGGTGGGCTCAAGCGGCAGCGCACCACGAGCCTCTCG GCGATCCTAGAGAACAGGTCTATCTAAGCAAGCATCCACACATGATGAGATGTGCAAAAC GAAACGAAAAAAAAAAACAGTAAAAACAACGTACACCACACCACAGTCCACACTATCTCA AAGCTGATCATAATACCATGCAGCTAGCTAGCTAGATTATGGATCACATGTTCCCCAAGT ACAACCGTTTTCCATTTCTTTAATTTTAGTTTTCTCTCCCATTGATTTTATACTAGTACT GCTTTGTGTGTGTGAATCTTGGTGCTGTATATCTGCATGGCATCTCTCAGCAATCAATAC AAGGCCACACTCTTTGTTC