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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0259400-00
CDS Infomation

cds chromosome:IRGSP-1.0:3:8406809:8408296:-1 gene:Os03g0259400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LEUCOANTHOCYANIDIN REDUCTASE description:Similar to Leucoanthocyanidin reductase (EC 1.17.1.3) (Leucocyanidin reductase). (Os03t0259400-00)
Sequence

ATGGCGCCTGCTGCTCAGGAGCTGCTGCTGCAAGAAGTGCCGCAGCCTCGCCGCACCGGC
GCGGCCCTCATCGTGGGCGCCACCGGCTACATCGGCCGTTTCGTCGCCGAGGCCTGCCTC
GACAGCGGCCGCGACACCTTCATCCTCGTCCGCCCCGGGAACGCCTGCCCCGCGCGCGCC
GCCTCCGTCGACGCGCTCCGCCAGAAAGGCGCCGTCGTCATCGAGGGCTGCGTCGGGGGG
AAGGAGGGGAGGAAGTCCGTGGAGGCGGCGCTCCGCGCGCGCGGCGTCGAGGTGGTGATC
TCGGTGATGGGCGGCGCCAGCATCCTCGACCAGCTCGGCCTCATCGAGGCCATCCGAGCT
GCAGGCACGGTCAAAAGGTTTCTGCCGTCGGAGTTCGGGCACGACGTGGACAGGGCGCGG
CCGGTGGGGGCGGGGCTGAGGTTCTACGAGGAGAAGCGGCTGGTGCGGCGGGCGGCGGAG
GCGTCGGGCGTGCCGTACACCTTCATCTGCTGCAACTCCATCGCCGGCTGGCCCTACCAC
GACAGCACGCACCCGTCCGAGCTGCCGCCGCCGCTCGACCGCTTCCAGATCTACGGCGAC
GGCGACGTCAGAGCTTTCTTCGTGGCTGGAAGCGACATTGGTAAGTTCACCATCAGGGCT
GCCTACGACGCCCGGAGCATCAACAAGATCGTGCACTTCCGTCCCGCCTGCAATCTCCTC
AGCACGAACGAGATGGCGTCGCTGTGGGAGAGCAAGATCGGCCGGACACTGCCACGCGTG
ACGCTTACCGAGGAGGACTTGATCGCCATGGCTGCAGATGACATCATCCCGGAGAGCATA
GTCGCTTCACTGACGCATGACATTTTTATAAACGGTTGCCAGACACATTTCTACATAGAC
GGGCCTAGAGACATTGAAATCTCAAGCCTTTACCCTGATATTCCCTTCAGAACAATAGAC
GAATGCTTCGACGACTACATACATGTCCTCAACCTAGCAGAGGAAGCTAAAGAAGAGGAG
GAGAAGAAGAACGCGCCAACAGTTGGGAGATTGGCAATACCACCTACTTGTGCTTAG

Peptide Sequence

PEP ID

Os03t0259400-00
PEP Infomation

pep chromosome:IRGSP-1.0:3:8406809:8408296:-1 gene:Os03g0259400 transcript:Os03t0259400-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LEUCOANTHOCYANIDIN REDUCTASE description:Similar to Leucoanthocyanidin reductase (EC 1.17.1.3) (Leucocyanidin reductase). (Os03t0259400-00)
Sequence

MAPAAQELLLQEVPQPRRTGAALIVGATGYIGRFVAEACLDSGRDTFILVRPGNACPARA
ASVDALRQKGAVVIEGCVGGKEGRKSVEAALRARGVEVVISVMGGASILDQLGLIEAIRA
AGTVKRFLPSEFGHDVDRARPVGAGLRFYEEKRLVRRAAEASGVPYTFICCNSIAGWPYH
DSTHPSELPPPLDRFQIYGDGDVRAFFVAGSDIGKFTIRAAYDARSINKIVHFRPACNLL
STNEMASLWESKIGRTLPRVTLTEEDLIAMAADDIIPESIVASLTHDIFINGCQTHFYID
GPRDIEISSLYPDIPFRTIDECFDDYIHVLNLAEEAKEEEEKKNAPTVGRLAIPPTCA

Transcript Sequence

Transcript ID

Os03t0259400-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:8406809:8408296:-1 gene:Os03g0259400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LEUCOANTHOCYANIDIN REDUCTASE description:Similar to Leucoanthocyanidin reductase (EC 1.17.1.3) (Leucocyanidin reductase). (Os03t0259400-00)
Sequence

ATGGCGCCTGCTGCTCAGGAGCTGCTGCTGCAAGAAGTGCCGCAGCCTCGCCGCACCGGC
GCGGCCCTCATCGTGGGCGCCACCGGCTACATCGGCCGTTTCGTCGCCGAGGCCTGCCTC
GACAGCGGCCGCGACACCTTCATCCTCGTCCGCCCCGGGAACGCCTGCCCCGCGCGCGCC
GCCTCCGTCGACGCGCTCCGCCAGAAAGGCGCCGTCGTCATCGAGGGCTGCGTCGGGGGG
AAGGAGGGGAGGAAGTCCGTGGAGGCGGCGCTCCGCGCGCGCGGCGTCGAGGTGGTGATC
TCGGTGATGGGCGGCGCCAGCATCCTCGACCAGCTCGGCCTCATCGAGGCCATCCGAGCT
GCAGGCACGGTCAAAAGGTTTCTGCCGTCGGAGTTCGGGCACGACGTGGACAGGGCGCGG
CCGGTGGGGGCGGGGCTGAGGTTCTACGAGGAGAAGCGGCTGGTGCGGCGGGCGGCGGAG
GCGTCGGGCGTGCCGTACACCTTCATCTGCTGCAACTCCATCGCCGGCTGGCCCTACCAC
GACAGCACGCACCCGTCCGAGCTGCCGCCGCCGCTCGACCGCTTCCAGATCTACGGCGAC
GGCGACGTCAGAGCTTTCTTCGTGGCTGGAAGCGACATTGGTAAGTTCACCATCAGGGCT
GCCTACGACGCCCGGAGCATCAACAAGATCGTGCACTTCCGTCCCGCCTGCAATCTCCTC
AGCACGAACGAGATGGCGTCGCTGTGGGAGAGCAAGATCGGCCGGACACTGCCACGCGTG
ACGCTTACCGAGGAGGACTTGATCGCCATGGCTGCAGATGACATCATCCCGGAGAGCATA
GTCGCTTCACTGACGCATGACATTTTTATAAACGGTTGCCAGACACATTTCTACATAGAC
GGGCCTAGAGACATTGAAATCTCAAGCCTTTACCCTGATATTCCCTTCAGAACAATAGAC
GAATGCTTCGACGACTACATACATGTCCTCAACCTAGCAGAGGAAGCTAAAGAAGAGGAG
GAGAAGAAGAACGCGCCAACAGTTGGGAGATTGGCAATACCACCTACTTGTGCTTAGGTC
CTCATAAGAAGTCCTGAAACAATTACCTTCTCGTGTTTCTT