Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0254700-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:8165841:8174895:-1 gene:Os03g0254700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TOPLESS-RELATED PROTEIN 3 description:WD40 repeat-like domain containing protein. (Os03t0254700-01);Similar to predicted protein. (Os03t0254700-02)
Sequence	ATGTCGTCGCTGAGCCGGGAGCTGGTATTCCTCATCCTGCAGTTCCTCGATGAGGAGAAG TTCAAGGAGACTGTTCACAAGCTTGAGCAGGAGTCTGGGTTCTACTTCAACATGAAGTAC TTCGAAGACGAGGTGATCAATGGGAATTGGGATGAGGTTGAGCGCTACCTCGGTGGCTTT ACCAAGGTTGATGACAACCGCTACTCGATGAAGATATTCTTTGAGATCCGCAAACAGAAG TATCTTGAGGCCCTTGATAAGCATGATCGTTCGAAGGCGGTTGAAATCTTGGTCAAGGAC CTGAAGGTCTTCGCGTCCTTTAACGAGGAGTTGTTTAAGGAGATCACACAGCTTTTGACG TTGGAAAACTTTAGGGAAAATGAGCAACTCTCCAAATACGGTGATACAAAATCTGCCAGA GCAATAATGCTTGTTGAACTAAAGAAGCTGATTGAAGCTAATCCCTTGTTCCGTGACAAG CTTCAGTTTCCAAATCTGAAGAGCTCCAGATTGCGGACACTTATAAACCAGAGCTTAAAC TGGCAGCACCAGCTTTGCAAAAATCCTAGACCTAACCCTGATATCAAGACTCTGTTTGTT GATCATTCTTGTGGACAACCAAATGGTGCTCGTGCTCCATCGCCAGCAAACAATCCATTA CTTGGATCTATACCAAAACCTGGAGGTTTCCCCCCATTGGGTGCTCACGCGCCATTTCAA CCTGCACCTACACCTGTCCCACCTCTGGCTGGCTGGATGTCAAACCCTCCAGCAGTAACA CATCCTGCTGTGTCTGGTGGAGCTATTGGATTTGGTACTCCTACAAATCCTGCTGCTATA TTAAAACATCCTAGAACACCAACAACTGCCAATCCTTCTATGGATTATCCATCAGGAGAT TCTGATCACGTCTCCAAGAGAACGAGACCAGTTGGGATGTCTGAGGAGGTGAATCTTCCA GTGAATATGTTACCTGTGACATATCCACAGAGTCATAGTTACCCGCAAGATGATTTTCAT AAAAATGTTGCACGGACATTGAGCCAAGGATCAACTCCAATGAGCATGGACTTCCATCCA GTTCAGCAAACTCTCCTTCTTGTTGGTACCAATGTTGGTGACATTGGATTATGGGATGTC GGTACCAAGGAACGACTTGTTTTAAGAAACTTCAAGGTTTGGGATCTTACAAAATGCTCA ATGGCCCTCCAGGCATCACTTGTCAAAGACCCTACTGTCTCAGTTAACCGCATAATATGG AGTCCTGATGGAACCTTGTTTGGTGTTGCTTATTCAAGGCATATTGTACAGATCTATTCA TACCATGGCGGTGATGATATCAGGCAGCACTTGGAGATTGATGCGCATGTCGGTGGTGTA AATGACATTGCATTTGCCCATCCAAATAAGCAGCTATGTATAATAACCTGCGGAGATGAC AAGACAATTAAGGTCTGGGAGGCCACTAGTGGAGCAAAGCAATTTACATTTGAAGGTCAT GAAGCTCCTGTTTACTCTGTTTGTCCACATTATAAGGAAAATATTCAGTTCATCTTCTCA ACTGCTTTGGATGGAAAGATAAAGGCTTGGCTATATGATAATTTGGGATCCAGAGTTGAC TATGATGCGCCAGGACATTGGTGCACAACAATGGCATATAGTGCAGATGGTTCAAGGTTA TTTTCTTGTGGGACTAGCAAGGATGGCGAATCACATCTAGTGGAATGGAATGAAAGTGAA GGAGCTGTCAAGAGAACTTACCAGGGATTTCGCAAGCGATCGATGGGTGTTGTCCAATTT GATACCACACGGAACAGGTTTTTGGCTGCTGGAGATGAATTCTTGATTAAGATATGGGAC ATGGACAACACAAGTCTTCTGACTACCATTGATGCCGATGGTGGTCTTCCTGCAAGTCCA CGGGTCCGATTCAACAAGGAAGGTACTCTGCTGGCTGTTTCTACCCATGAAAATGGTATC AAGATCTTAGCAAATGCTGATGGAGTACGGTTGCTGCGCACATTGGAAAATCGTTCATTT GATGCTTCTCGGAGTGCGTCTGAGACTGTAACAAAGCCCCTAATGAATCCATTGACTGCT GCTGCTGCTGCGGCGGCGTCAGCTGCTGCTGCCGGGACTAGTTCAGGAAATGCTGCTCCA CCGGCAATAACTGCACTGAATGGGGATAGCCGAAGCTTGGTTGATGTAAAGCCTAGAATA GCTGATGAGCCATTGGATAAATCAAAAGTCTGGAAACTTATGGAGATAACCGAGTCAAGT CAGTGCAGATCATTGAAATTAACAGATAATATGAGGACAAGCAAGATTTCAAGACTTATT TACACAAATTCTGGTGTCGCTATCTTGGCTTTAGCTTCAAATGCTGTTCATCTGCTCTGG AAATGGCCTCGCAATGACCGAAACTCAAGTGGAAAGGCTACTGCAAGTGTTTCTCCTCAA TTATGGCAACCTCCAAGCGGCATCCTCATGACTAATGACATAACTGACAACCCTGAAGAA GCTGTCCATTGCTTTGCTTTGTCAAAGAATGATTCATATGTCATGTCTGCATCTGGAGGG AAAATATCTCTGTTCAACATGATGACTTTTAAGACGATGACAACTTTTATGCCTCCGCCG CCGGCGGCAACGTTTCTTGCTTTCCATCCTCAAGATAACAACATTATAGCAATTGGAATG GATGACTCAACCATCCAAATCTACAATGTTCGAATTGATGAGGTCAAAAGCAAACTTCGA GGGCACTCTAAGAAAATTACTGGACTTGCTTTTTCAAATGTATTAAATGTGTTAGTCTCT TCTGGAGCTGATGCGCAGATATGTGTGTGGAGCACAGATGGGTGGGATAAATTAAAGAGC AGAATGTTACAGATACCATCAAGTCGTCCATCATCTATAATCTTAGACACACGTGTTCAG TTCCATCAGGATCAATTGCACTTTCTTGTTGTGCATGAGACCCAGATTGCCATATATGAA ACTACAAAATTAGAACCCGTGAAGCAGTGGCCTGTCCGGGAGAACTCTTCTCCAATAACG CATGCCATGTTCTCCTGCGATAGTCAATTGATTTATGCAAGCTTTCTGGATGCCACTGTT TGCATATTTAATGCATCGAGTTTGAGACTCCAATGTCGAATTCTTCCAGCATCCTATCTT CCTCAGAATATCAGCTCAAATGTTTATCCTGTCGTTGTGGCGGCACATCCTTCGGAAGCA AATCAGTTTGCTCTAGGCCTGACTGATGGTGGTGTTTATGTATTGGAACCCTTGGAATCT GAGAGAAAATGGGGAAATCCTCCACCAGCAGAGAATGGATCAACCAGCGCTTTGTCCACA CCTCCTAATGGAGCATCAAGTTCTGATCAACCAGAAAGATAA

Peptide Sequence

PEP ID	Os03t0254700-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:8165841:8174895:-1 gene:Os03g0254700 transcript:Os03t0254700-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TOPLESS-RELATED PROTEIN 3 description:WD40 repeat-like domain containing protein. (Os03t0254700-01);Similar to predicted protein. (Os03t0254700-02)
Sequence	MSSLSRELVFLILQFLDEEKFKETVHKLEQESGFYFNMKYFEDEVINGNWDEVERYLGGF TKVDDNRYSMKIFFEIRKQKYLEALDKHDRSKAVEILVKDLKVFASFNEELFKEITQLLT LENFRENEQLSKYGDTKSARAIMLVELKKLIEANPLFRDKLQFPNLKSSRLRTLINQSLN WQHQLCKNPRPNPDIKTLFVDHSCGQPNGARAPSPANNPLLGSIPKPGGFPPLGAHAPFQ PAPTPVPPLAGWMSNPPAVTHPAVSGGAIGFGTPTNPAAILKHPRTPTTANPSMDYPSGD SDHVSKRTRPVGMSEEVNLPVNMLPVTYPQSHSYPQDDFHKNVARTLSQGSTPMSMDFHP VQQTLLLVGTNVGDIGLWDVGTKERLVLRNFKVWDLTKCSMALQASLVKDPTVSVNRIIW SPDGTLFGVAYSRHIVQIYSYHGGDDIRQHLEIDAHVGGVNDIAFAHPNKQLCIITCGDD KTIKVWEATSGAKQFTFEGHEAPVYSVCPHYKENIQFIFSTALDGKIKAWLYDNLGSRVD YDAPGHWCTTMAYSADGSRLFSCGTSKDGESHLVEWNESEGAVKRTYQGFRKRSMGVVQF DTTRNRFLAAGDEFLIKIWDMDNTSLLTTIDADGGLPASPRVRFNKEGTLLAVSTHENGI KILANADGVRLLRTLENRSFDASRSASETVTKPLMNPLTAAAAAAASAAAAGTSSGNAAP PAITALNGDSRSLVDVKPRIADEPLDKSKVWKLMEITESSQCRSLKLTDNMRTSKISRLI YTNSGVAILALASNAVHLLWKWPRNDRNSSGKATASVSPQLWQPPSGILMTNDITDNPEE AVHCFALSKNDSYVMSASGGKISLFNMMTFKTMTTFMPPPPAATFLAFHPQDNNIIAIGM DDSTIQIYNVRIDEVKSKLRGHSKKITGLAFSNVLNVLVSSGADAQICVWSTDGWDKLKS RMLQIPSSRPSSIILDTRVQFHQDQLHFLVVHETQIAIYETTKLEPVKQWPVRENSSPIT HAMFSCDSQLIYASFLDATVCIFNASSLRLQCRILPASYLPQNISSNVYPVVVAAHPSEA NQFALGLTDGGVYVLEPLESERKWGNPPPAENGSTSALSTPPNGASSSDQPER

Transcript Sequence

Transcript ID	Os03t0254700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:8165841:8174895:-1 gene:Os03g0254700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TOPLESS-RELATED PROTEIN 3 description:WD40 repeat-like domain containing protein. (Os03t0254700-01);Similar to predicted protein. (Os03t0254700-02)
Sequence	GTTGACTTACCATACTACCCCTCGCTCAGTCTCATCCTCCTCCAGGCTCGCCCTCGTTCC TCTCTCTCTCTCCTCGCAAAGCGATCGAGGCAAATCCGGAGCCGCCGCCGGGCCCTCGAT CTTCGCCGGCGGCCGCCCCCACCTCCGTCGACGAGCGAAGCGGCGCCGCCTCTCCCTTCT ACCGGGCCGACGTGGAGCTGAGCGGAGCGGCGGGGAGGGGGGGGGGGGTGGGGAGGGGGG TGAGGGGAGATCCACGCGAGCTGATCTCTTCCGTGGTGTGTGCGCCGTGCGGGACGGGGT CGGGTCGTTTTCTGTGACCTGTAGAATAGGGTAGGGTTTGAGGCTTTTGAGCAGAGGCGC ATCCGCCGCGTGGGTGGGTGGGTGCGGCGGTGGAGGGGAGGATGTCGTCGCTGAGCCGGG AGCTGGTATTCCTCATCCTGCAGTTCCTCGATGAGGAGAAGTTCAAGGAGACTGTTCACA AGCTTGAGCAGGAGTCTGGGTTCTACTTCAACATGAAGTACTTCGAAGACGAGGTGATCA ATGGGAATTGGGATGAGGTTGAGCGCTACCTCGGTGGCTTTACCAAGGTTGATGACAACC GCTACTCGATGAAGATATTCTTTGAGATCCGCAAACAGAAGTATCTTGAGGCCCTTGATA AGCATGATCGTTCGAAGGCGGTTGAAATCTTGGTCAAGGACCTGAAGGTCTTCGCGTCCT TTAACGAGGAGTTGTTTAAGGAGATCACACAGCTTTTGACGTTGGAAAACTTTAGGGAAA ATGAGCAACTCTCCAAATACGGTGATACAAAATCTGCCAGAGCAATAATGCTTGTTGAAC TAAAGAAGCTGATTGAAGCTAATCCCTTGTTCCGTGACAAGCTTCAGTTTCCAAATCTGA AGAGCTCCAGATTGCGGACACTTATAAACCAGAGCTTAAACTGGCAGCACCAGCTTTGCA AAAATCCTAGACCTAACCCTGATATCAAGACTCTGTTTGTTGATCATTCTTGTGGACAAC CAAATGGTGCTCGTGCTCCATCGCCAGCAAACAATCCATTACTTGGATCTATACCAAAAC CTGGAGGTTTCCCCCCATTGGGTGCTCACGCGCCATTTCAACCTGCACCTACACCTGTCC CACCTCTGGCTGGCTGGATGTCAAACCCTCCAGCAGTAACACATCCTGCTGTGTCTGGTG GAGCTATTGGATTTGGTACTCCTACAAATCCTGCTGCTATATTAAAACATCCTAGAACAC CAACAACTGCCAATCCTTCTATGGATTATCCATCAGGAGATTCTGATCACGTCTCCAAGA GAACGAGACCAGTTGGGATGTCTGAGGAGGTGAATCTTCCAGTGAATATGTTACCTGTGA CATATCCACAGAGTCATAGTTACCCGCAAGATGATTTTCATAAAAATGTTGCACGGACAT TGAGCCAAGGATCAACTCCAATGAGCATGGACTTCCATCCAGTTCAGCAAACTCTCCTTC TTGTTGGTACCAATGTTGGTGACATTGGATTATGGGATGTCGGTACCAAGGAACGACTTG TTTTAAGAAACTTCAAGGTTTGGGATCTTACAAAATGCTCAATGGCCCTCCAGGCATCAC TTGTCAAAGACCCTACTGTCTCAGTTAACCGCATAATATGGAGTCCTGATGGAACCTTGT TTGGTGTTGCTTATTCAAGGCATATTGTACAGATCTATTCATACCATGGCGGTGATGATA TCAGGCAGCACTTGGAGATTGATGCGCATGTCGGTGGTGTAAATGACATTGCATTTGCCC ATCCAAATAAGCAGCTATGTATAATAACCTGCGGAGATGACAAGACAATTAAGGTCTGGG AGGCCACTAGTGGAGCAAAGCAATTTACATTTGAAGGTCATGAAGCTCCTGTTTACTCTG TTTGTCCACATTATAAGGAAAATATTCAGTTCATCTTCTCAACTGCTTTGGATGGAAAGA TAAAGGCTTGGCTATATGATAATTTGGGATCCAGAGTTGACTATGATGCGCCAGGACATT GGTGCACAACAATGGCATATAGTGCAGATGGTTCAAGGTTATTTTCTTGTGGGACTAGCA AGGATGGCGAATCACATCTAGTGGAATGGAATGAAAGTGAAGGAGCTGTCAAGAGAACTT ACCAGGGATTTCGCAAGCGATCGATGGGTGTTGTCCAATTTGATACCACACGGAACAGGT TTTTGGCTGCTGGAGATGAATTCTTGATTAAGATATGGGACATGGACAACACAAGTCTTC TGACTACCATTGATGCCGATGGTGGTCTTCCTGCAAGTCCACGGGTCCGATTCAACAAGG AAGGTACTCTGCTGGCTGTTTCTACCCATGAAAATGGTATCAAGATCTTAGCAAATGCTG ATGGAGTACGGTTGCTGCGCACATTGGAAAATCGTTCATTTGATGCTTCTCGGAGTGCGT CTGAGACTGTAACAAAGCCCCTAATGAATCCATTGACTGCTGCTGCTGCTGCGGCGGCGT CAGCTGCTGCTGCCGGGACTAGTTCAGGAAATGCTGCTCCACCGGCAATAACTGCACTGA ATGGGGATAGCCGAAGCTTGGTTGATGTAAAGCCTAGAATAGCTGATGAGCCATTGGATA AATCAAAAGTCTGGAAACTTATGGAGATAACCGAGTCAAGTCAGTGCAGATCATTGAAAT TAACAGATAATATGAGGACAAGCAAGATTTCAAGACTTATTTACACAAATTCTGGTGTCG CTATCTTGGCTTTAGCTTCAAATGCTGTTCATCTGCTCTGGAAATGGCCTCGCAATGACC GAAACTCAAGTGGAAAGGCTACTGCAAGTGTTTCTCCTCAATTATGGCAACCTCCAAGCG GCATCCTCATGACTAATGACATAACTGACAACCCTGAAGAAGCTGTCCATTGCTTTGCTT TGTCAAAGAATGATTCATATGTCATGTCTGCATCTGGAGGGAAAATATCTCTGTTCAACA TGATGACTTTTAAGACGATGACAACTTTTATGCCTCCGCCGCCGGCGGCAACGTTTCTTG CTTTCCATCCTCAAGATAACAACATTATAGCAATTGGAATGGATGACTCAACCATCCAAA TCTACAATGTTCGAATTGATGAGGTCAAAAGCAAACTTCGAGGGCACTCTAAGAAAATTA CTGGACTTGCTTTTTCAAATGTATTAAATGTGTTAGTCTCTTCTGGAGCTGATGCGCAGA TATGTGTGTGGAGCACAGATGGGTGGGATAAATTAAAGAGCAGAATGTTACAGATACCAT CAAGTCGTCCATCATCTATAATCTTAGACACACGTGTTCAGTTCCATCAGGATCAATTGC ACTTTCTTGTTGTGCATGAGACCCAGATTGCCATATATGAAACTACAAAATTAGAACCCG TGAAGCAGTGGCCTGTCCGGGAGAACTCTTCTCCAATAACGCATGCCATGTTCTCCTGCG ATAGTCAATTGATTTATGCAAGCTTTCTGGATGCCACTGTTTGCATATTTAATGCATCGA GTTTGAGACTCCAATGTCGAATTCTTCCAGCATCCTATCTTCCTCAGAATATCAGCTCAA ATGTTTATCCTGTCGTTGTGGCGGCACATCCTTCGGAAGCAAATCAGTTTGCTCTAGGCC TGACTGATGGTGGTGTTTATGTATTGGAACCCTTGGAATCTGAGAGAAAATGGGGAAATC CTCCACCAGCAGAGAATGGATCAACCAGCGCTTTGTCCACACCTCCTAATGGAGCATCAA GTTCTGATCAACCAGAAAGATAATGATGAGGAGTTTGAAGTGTTACATTTTTTGTACTTG CACGGTACAAATTCACTAACCAAGACGATGCACTTCACTCTTACAGCTTCCCTTCCGTAG AGCTGGTTCCAAGGGGTAGTCGATGAACGGACGGAATAAAAAGACAAGCTTAACAGCAGT TCATTTGTTGCTTATATGTCTCACTGTTATCTGTATTAAGTGAGGGAAGAGTTAGTCCTA GTATTTAATTTTGCTGTCTGTCGTGCTGTGAAAAAAGATGTTTGCAAGTAGCTTAAGCTG TAGCAACAATTTGTCTGAACTTATTATCACCTTTTATTCACAACTAGAAAGTAAATTGCT GCTCC