Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0254400-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:8152539:8154731:1 gene:Os03g0254400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Patatin-related phospholipase A III alpha description:Patatin-related phospholipase A, Modulation of longitudinal growth of vegetative tissues and seeds (Os03t0254400-01);Similar to patatin-like protein 3. (Os03t0254400-02)
Sequence	ATGGAGGAGGCGGAGGAGATGCAGGTGGAGAGGATGCAGGAGGAGGTGGAGGGAGGCGGC GCGGATACGGATAAGCTCAGCTACGAGATTTTCTCCATCCTCGAGAGCAAGTTCCTGTTC GGGTACACGGACCCGCACCAGCTGTGGCTGCCCAAGGCGCCGGCGGCGCAGGCGTCGGCG GCGACGGCCGTGCCGTCGGGGAAGGCGGCGCAGCGTGGGAAGGTGTGCGTGCTGTGCGTG GATGGCGGCGGCGGCGGGCTGCGGGCGCTGCTCTCCGGCCGCGCGCTGGCGCACCTGGAG GCCGCGCTCCGGCGCGCGTCGGGCGACCCGGACGCCCGCGTCGCGGACTACTTCGACCTC GTCGCCGGTACGGGCGCCGGCGGCGTGTTCGCCGCGATGCTGTTCTCGACGCACTCGCGC GGCGCGCCTCTGTTCCACGCCGATGACACATGGCGCCTCGTGGCTGACCACGCTCCCCGG CTCTTCCGCAAGGCCGTCGGCGGCTCGACGTCGCTCTTCTGCCGACCCAAGAAGCGGCCC CTCGCGGCGCCGACGGCGGCGCTGGACGCGGCCATGAAGACGGCGTTCGGCGAGGAGCTC ACCCTGCGGGATACCATCAAGCCCGTGCTCATCTCCTGCTACGACCTCAAGTCGTCCGCG CCGCTCGTGTTCTCGCGCGCCGACGCCCTGGAGAGCGAGAGCTACGACTTCCGCCTCTGC GAGGTCGGCCGCGCGGCGTGGTCGGAGGCCGGCCGATTCGAGCCCGCCGAGGTCGCGTCG GTCGACGGCGCCACGTCCTGCGCCGCCGTGGACGGCGGGCCGATCATGGGCAGCCCCGCC GCCGCCGCAATCACGCACGTGCTTCACAACAAGCACGAGTTCCCGTTCGTGCGCGGCGTC GAGGACCTCCTCGTGCTCTCCATCGGGGGATGCTCCGCCGGTGGCACGGGGGCCGCGGCC GACGCCGACCTCCGACGCTTGCGCCGCTGGGGTCCCAAGGATTGGGCGCGCCCCATCGCG CGCATCGCCGCCGACGGCGCCGCCGACCTCGTCGACCACGCCGTGGCGCGCGCCTTCGGG CAGTGCCGCTCGTCCAACTACCTGCGCATTCAGGCGAAACGGGAGAGCATGCCGCCGTGC GGGCCGGACGGGGAGTACGACCCAACCCCGGCGAACGTGCACGCGCTGCTCGCGGCGGCG GACGAGATGCTGAAGCACCGGAACGTGGAGTCGGTGCTGTTCGAAGGGAGGCGTGTCGGC GAGCAGACGAACGCGGAGAGGCTGGACTGCTTCGCCGCCGAGCTCGTCGCCGAGCATCGC AGCAGGGGCTCCCGTATTGGCCCCACCGTGGCGTTCAAGCAGGCGCCGCGGAAGCAGCCG CCGGCGGCGGCGGTGGCGGCGATGGGCTGA

Peptide Sequence

PEP ID	Os03t0254400-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:8152539:8154731:1 gene:Os03g0254400 transcript:Os03t0254400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Patatin-related phospholipase A III alpha description:Patatin-related phospholipase A, Modulation of longitudinal growth of vegetative tissues and seeds (Os03t0254400-01);Similar to patatin-like protein 3. (Os03t0254400-02)
Sequence	MEEAEEMQVERMQEEVEGGGADTDKLSYEIFSILESKFLFGYTDPHQLWLPKAPAAQASA ATAVPSGKAAQRGKVCVLCVDGGGGGLRALLSGRALAHLEAALRRASGDPDARVADYFDL VAGTGAGGVFAAMLFSTHSRGAPLFHADDTWRLVADHAPRLFRKAVGGSTSLFCRPKKRP LAAPTAALDAAMKTAFGEELTLRDTIKPVLISCYDLKSSAPLVFSRADALESESYDFRLC EVGRAAWSEAGRFEPAEVASVDGATSCAAVDGGPIMGSPAAAAITHVLHNKHEFPFVRGV EDLLVLSIGGCSAGGTGAAADADLRRLRRWGPKDWARPIARIAADGAADLVDHAVARAFG QCRSSNYLRIQAKRESMPPCGPDGEYDPTPANVHALLAAADEMLKHRNVESVLFEGRRVG EQTNAERLDCFAAELVAEHRSRGSRIGPTVAFKQAPRKQPPAAAVAAMG

Transcript Sequence

Transcript ID	Os03t0254400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:8152539:8154731:1 gene:Os03g0254400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Patatin-related phospholipase A III alpha description:Patatin-related phospholipase A, Modulation of longitudinal growth of vegetative tissues and seeds (Os03t0254400-01);Similar to patatin-like protein 3. (Os03t0254400-02)
Sequence	CAAAGGAGAGAGAGAGAGAGAGAGGAAGACGACGACGACCTTTGTTGTTGTTTCCTTCTT TCTCTTCTCTTCTCCTCATCCTCCTCTTTAGCTTCCTCTCGCGCTCGCCGTCTCTCTCTC TCTCTCTCTATCGGGCGCGCGCCTTTCTGTGTTGGTCGTCTCTTTCCTCGCGTGCTCTGC CGCTGCGCAAGAATCAAAAGGCGCCGGCCACTAGAGAGAGTGTGTGTTTGTGTGTGTGTG GCTTGAGTTGAGAGTTGAGAGACCAATCGACCATCGGCTGTGATCTCAAAAGAGAGAGAG GGGCAAAGCGAAGTGGGCAGACTTGGGCGGCAATCCTTGCGAATCATCAAGGGATTCTGT CTTTTCTTTGGTGCGATTCGATTGTTTCTTTGTAGGGGGAAGGGAGAGAGGAGGGGGGGG GGGGGTTTTGGCAATTGGCATGGAGGAGGCGGAGGAGATGCAGGTGGAGAGGATGCAGGA GGAGGTGGAGGGAGGCGGCGCGGATACGGATAAGCTCAGCTACGAGATTTTCTCCATCCT CGAGAGCAAGTTCCTGTTCGGGTACACGGACCCGCACCAGCTGTGGCTGCCCAAGGCGCC GGCGGCGCAGGCGTCGGCGGCGACGGCCGTGCCGTCGGGGAAGGCGGCGCAGCGTGGGAA GGTGTGCGTGCTGTGCGTGGATGGCGGCGGCGGCGGGCTGCGGGCGCTGCTCTCCGGCCG CGCGCTGGCGCACCTGGAGGCCGCGCTCCGGCGCGCGTCGGGCGACCCGGACGCCCGCGT CGCGGACTACTTCGACCTCGTCGCCGGTACGGGCGCCGGCGGCGTGTTCGCCGCGATGCT GTTCTCGACGCACTCGCGCGGCGCGCCTCTGTTCCACGCCGATGACACATGGCGCCTCGT GGCTGACCACGCTCCCCGGCTCTTCCGCAAGGCCGTCGGCGGCTCGACGTCGCTCTTCTG CCGACCCAAGAAGCGGCCCCTCGCGGCGCCGACGGCGGCGCTGGACGCGGCCATGAAGAC GGCGTTCGGCGAGGAGCTCACCCTGCGGGATACCATCAAGCCCGTGCTCATCTCCTGCTA CGACCTCAAGTCGTCCGCGCCGCTCGTGTTCTCGCGCGCCGACGCCCTGGAGAGCGAGAG CTACGACTTCCGCCTCTGCGAGGTCGGCCGCGCGGCGTGGTCGGAGGCCGGCCGATTCGA GCCCGCCGAGGTCGCGTCGGTCGACGGCGCCACGTCCTGCGCCGCCGTGGACGGCGGGCC GATCATGGGCAGCCCCGCCGCCGCCGCAATCACGCACGTGCTTCACAACAAGCACGAGTT CCCGTTCGTGCGCGGCGTCGAGGACCTCCTCGTGCTCTCCATCGGGGGATGCTCCGCCGG TGGCACGGGGGCCGCGGCCGACGCCGACCTCCGACGCTTGCGCCGCTGGGGTCCCAAGGA TTGGGCGCGCCCCATCGCGCGCATCGCCGCCGACGGCGCCGCCGACCTCGTCGACCACGC CGTGGCGCGCGCCTTCGGGCAGTGCCGCTCGTCCAACTACCTGCGCATTCAGGCGAAACG GGAGAGCATGCCGCCGTGCGGGCCGGACGGGGAGTACGACCCAACCCCGGCGAACGTGCA CGCGCTGCTCGCGGCGGCGGACGAGATGCTGAAGCACCGGAACGTGGAGTCGGTGCTGTT CGAAGGGAGGCGTGTCGGCGAGCAGACGAACGCGGAGAGGCTGGACTGCTTCGCCGCCGA GCTCGTCGCCGAGCATCGCAGCAGGGGCTCCCGTATTGGCCCCACCGTGGCGTTCAAGCA GGCGCCGCGGAAGCAGCCGCCGGCGGCGGCGGTGGCGGCGATGGGCTGAGCCGGTGGCCG CGTGCACTGTGGAGTAAGGACATGTAGGCCCTCTCTTTCTTCTTGCTTTCGCTGGAATCC TGCTGCATTTTTTACGTGGCAGAGTGGCATTGCTCCAAGAAGCATTTTGCCAATGGGAAA TTCGACTTGGAGAAAATATGAAAGAACATCTGTGATATATAATTTCAGCTTCATTTCAAT TTAGCATAGAATTGTACTAGTATCATCTTTCTTCAGAATCATATGCTTCTTTGTTTTCTC TTCACATA