Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0253600-02
CDS Infomation

cds chromosome:IRGSP-1.0:3:8107052:8108260:-1 gene:Os03g0253600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os03t0253600-01);Conserved hypothetical protein. (Os03t0253600-02)
Sequence

ATGTCGTCGTATGACCAGATGCTCGCGCCGCTTCTTGGCGCCGGCCGGTCGGCGTGGACG
GCGCACGACGGCGGCGGCGGCGGCGGAGAAGCCGTGGTGAGGCAGATACTCAAGTGCACG
AGGTGGCAGCTGGAGGAGACGACGGACTTCGTCACCTGCCCGTACCACTACTACTGCGAC
AGCTCGTACCCGGGCGACTACCACGCCGCCGTCGGCGTGCTCGTCGCCGCCTTCGCCGCG
TACTGCTTCCTCTCGACGCTCGCGTTCACGGTGCTCGACCTGGCGAGGAGCGGCGGCGGC
GGCGGCGGCGCGGGCGGGGTGAGGGGGATCAGGAGGAAGTACCTGCTCCCGTCGGGGCCG
TTCCTGCTGCCGCTGGTGCTGCTCGTGCTCGCCAAGGGGCAGCGGATCAACGCCGTGTTC
CCGCTCGCGCAGCTCGGCCCGGCATTGCTGCTGCTGCTGCAGGCGTCGGCGCTGGCGTTC
CGGAACGAGGCCGACGGCGACATCCGGTACGCGGTGCTGGAGGCGTCCACCGTCTCCGGC
GTGCTGCACGCCAGCCTGTACCTCGACGCCGTCGTGCTCCCCTACTACACGGGGCTGGAG
GCGCTCCGGTGGTCGCAGTTTTCCGGCGAGTGCGCGACCTGCCTCTGCCGCATGGAGCCC
CTCGTCGTCGGCGGCACGGCGGTGCGGTACCGCGGCCTCTCCAAGACGGCGCTGGCGATC
ATCTTCGCGCTGTGCTCGCGGATGGTGTGCCGGATTTACGGCGAGGAGCGGCTCAGCGCG
TGGACGCGGTCGGCGCTGGAGGCCGCCGGCTGGGTGTTCGTGGCGGCCGACGCCGTCTAC
CTCGTCGGCTGGGTCGCCATCGAGGGCGGCGCCGTCGCCGTGCTGGCGTACAGCCTCGTC
GCCGGCCTCGTCTTCCTCAGCGTCTTCGGCAAGGTCTACAGATTCTTGGCATGGTTGGAG
ACGAGACAATCTCAATGGAAATCAAGCCTCTGCCATAGCGCTGTATGA

Peptide Sequence

PEP ID

Os03t0253600-02
PEP Infomation

pep chromosome:IRGSP-1.0:3:8107052:8108260:-1 gene:Os03g0253600 transcript:Os03t0253600-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os03t0253600-01);Conserved hypothetical protein. (Os03t0253600-02)
Sequence

MSSYDQMLAPLLGAGRSAWTAHDGGGGGGEAVVRQILKCTRWQLEETTDFVTCPYHYYCD
SSYPGDYHAAVGVLVAAFAAYCFLSTLAFTVLDLARSGGGGGGAGGVRGIRRKYLLPSGP
FLLPLVLLVLAKGQRINAVFPLAQLGPALLLLLQASALAFRNEADGDIRYAVLEASTVSG
VLHASLYLDAVVLPYYTGLEALRWSQFSGECATCLCRMEPLVVGGTAVRYRGLSKTALAI
IFALCSRMVCRIYGEERLSAWTRSALEAAGWVFVAADAVYLVGWVAIEGGAVAVLAYSLV
AGLVFLSVFGKVYRFLAWLETRQSQWKSSLCHSAV

Transcript Sequence

Transcript ID

Os03t0253600-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:8107052:8108260:-1 gene:Os03g0253600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os03t0253600-01);Conserved hypothetical protein. (Os03t0253600-02)
Sequence

AAGAAGAGGAGGAGGAGGAGGAGGAGGAGACAGCTGCTGCCATGTCGTCGTATGACCAGA
TGCTCGCGCCGCTTCTTGGCGCCGGCCGGTCGGCGTGGACGGCGCACGACGGCGGCGGCG
GCGGCGGAGAAGCCGTGGTGAGGCAGATACTCAAGTGCACGAGGTGGCAGCTGGAGGAGA
CGACGGACTTCGTCACCTGCCCGTACCACTACTACTGCGACAGCTCGTACCCGGGCGACT
ACCACGCCGCCGTCGGCGTGCTCGTCGCCGCCTTCGCCGCGTACTGCTTCCTCTCGACGC
TCGCGTTCACGGTGCTCGACCTGGCGAGGAGCGGCGGCGGCGGCGGCGGCGCGGGCGGGG
TGAGGGGGATCAGGAGGAAGTACCTGCTCCCGTCGGGGCCGTTCCTGCTGCCGCTGGTGC
TGCTCGTGCTCGCCAAGGGGCAGCGGATCAACGCCGTGTTCCCGCTCGCGCAGCTCGGCC
CGGCATTGCTGCTGCTGCTGCAGGCGTCGGCGCTGGCGTTCCGGAACGAGGCCGACGGCG
ACATCCGGTACGCGGTGCTGGAGGCGTCCACCGTCTCCGGCGTGCTGCACGCCAGCCTGT
ACCTCGACGCCGTCGTGCTCCCCTACTACACGGGGCTGGAGGCGCTCCGGTGGTCGCAGT
TTTCCGGCGAGTGCGCGACCTGCCTCTGCCGCATGGAGCCCCTCGTCGTCGGCGGCACGG
CGGTGCGGTACCGCGGCCTCTCCAAGACGGCGCTGGCGATCATCTTCGCGCTGTGCTCGC
GGATGGTGTGCCGGATTTACGGCGAGGAGCGGCTCAGCGCGTGGACGCGGTCGGCGCTGG
AGGCCGCCGGCTGGGTGTTCGTGGCGGCCGACGCCGTCTACCTCGTCGGCTGGGTCGCCA
TCGAGGGCGGCGCCGTCGCCGTGCTGGCGTACAGCCTCGTCGCCGGCCTCGTCTTCCTCA
GCGTCTTCGGCAAGGTCTACAGATTCTTGGCATGGTTGGAGACGAGACAATCTCAATGGA
AATCAAGCCTCTGCCATAGCGCTGTATGATACTACTACTCGTCAGAAAAAAAAAATCTGT
AAAAAGAAAAAGGAAACCATTTCTTAGCTCACCTTTTGTTCATTTGTACAATGATTCACA
CAATGAGAAAACCACAGTTGTAATTTTTTTTTCATGCTTATATATAAGTTCTCTGAAACA
AATTTGTTC