Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0253100-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:8067630:8071826:-1 gene:Os03g0253100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phosphomevalonate kinase, ERG8 domain containing protein. (Os03t0253100-01)
Sequence	ATGGAAGTGGTGGCGTCGGCGCCGGGGAAGGTGCTCGTCGCGGGAGGCTACCTCGTGCTG GAGCGGCCCAACGCCGGCCTCGTCCTCAGCACCAGCGCGCGCTTCTACGCCATCGTCCGC CCGCTCCGCGACGAGCTCAGCCACGACTCCTGGGCATGGGCGTGGACGGATGTGAAAGTG ACCTCTCCTCAGCTCTCCCGGGAGGCCACCTACAAGCTCTCCCTGAAGAAATCAACGCTC CAGTTGACGTCTTCAAGGGAATCTGCAAACCCTTTTGTGGAGCAGGCAGTGCAATTCTCG GTAGCAGCTGCTAAAGTGACTGTCACTGACAAAGAGGGGAAGGAGGCACTGGACAAGTTG CTTTTGCAAGGTTTGCACATTACAATTTTGGGCTGCAATGATTTCTATTCTTATAGAAAA CAGATTGAAGCACGTGGCCTTCCTCTAACTCCAGAGGTATTGCTTTCGTTGCCTCCATTC TGTTCAATTACATTTAATTCAGAAGTTGCTAATGGAACAATGACTGGAGAAAATTGCAAA CCTGAAGTTGCCAAAACTGGACTTGGGTCATCAGCTGCCATGACCACATCAGTAGTTGCA GCTCTTCTTCACTATCTTGGAACTGTTAACCTTTCATGTTTGGGCCAATCTTCCGGTGGC AACGCAGCTGGACGAGATCTTGACTTGCTGCATGCTATTGCTCAAAGTGCACATTGTATA GCACAAGGAAAAATTGGCAGTGGGTTTGATGTTAGTGCTGCTGTCTATGGGAGTCAACGT TACACAAGGTTTTCTCCAGAAATATTATCCTCGGCTCAGGTTACAGGTGGGCACTGCATG GCAGATGTGGTGGCAGATATTGTTACACAGAGTTGGGATCATGAGAAGGTTAAGTTTTCC TTGCCTCCTCTAATGTCCCTTCTTCTAGGGGAACCTGGAACTGGAGGATCATCCACTCCA TCAATGGTTGGATCTGTGAAACAGTGGCAGAAGTCAGACCCTCAGAAATCCAAGGAGACA TGGAGTAAATTGGGGATTGCTAATTCAGTGCTTGAGAACCAACTGAGGAACCTAAACAAA CTTGCTGAAGATCACTGGGAAGCCTATGAATCTGTTTTACGATCCTGTAGTCGTCTCACG TGCAGTAAGTGGACAGAGGTGGCTACCAATCAACATCAAGAACTAATTGTTAGATCATTA CTGGCCGCAAGAGATGCTTTCCTTGAAATAAGGCTTCATATGCGAGAGATGGGCATAGCA GCTGGTGTTCCAATTGAGCCAGAATCACAAACTCAACTTCTGGATGCCACTATGAATATG GAGGGTGTTCTACTAGCTGGAGTTCCTGGGGCCGGTGGCTTTGATGCAGTTTTCTCAGTG ATTTTGGGTGAAGCAAGTGATGCTGTAGCCAAAGCTTGGAGCTCAGCTGGTGTTCTCCCT CTTCTTGTTCGAGAAGATCCCCGAGGTGTTTCATTGGAAGCTGGTGACCCAAGAACAAGG GAGGTGTCAACCGCTGTATCATCGATACAAATAAACTGA

Peptide Sequence

PEP ID	Os03t0253100-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:8067630:8071826:-1 gene:Os03g0253100 transcript:Os03t0253100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phosphomevalonate kinase, ERG8 domain containing protein. (Os03t0253100-01)
Sequence	MEVVASAPGKVLVAGGYLVLERPNAGLVLSTSARFYAIVRPLRDELSHDSWAWAWTDVKV TSPQLSREATYKLSLKKSTLQLTSSRESANPFVEQAVQFSVAAAKVTVTDKEGKEALDKL LLQGLHITILGCNDFYSYRKQIEARGLPLTPEVLLSLPPFCSITFNSEVANGTMTGENCK PEVAKTGLGSSAAMTTSVVAALLHYLGTVNLSCLGQSSGGNAAGRDLDLLHAIAQSAHCI AQGKIGSGFDVSAAVYGSQRYTRFSPEILSSAQVTGGHCMADVVADIVTQSWDHEKVKFS LPPLMSLLLGEPGTGGSSTPSMVGSVKQWQKSDPQKSKETWSKLGIANSVLENQLRNLNK LAEDHWEAYESVLRSCSRLTCSKWTEVATNQHQELIVRSLLAARDAFLEIRLHMREMGIA AGVPIEPESQTQLLDATMNMEGVLLAGVPGAGGFDAVFSVILGEASDAVAKAWSSAGVLP LLVREDPRGVSLEAGDPRTREVSTAVSSIQIN

Transcript Sequence

Transcript ID	Os03t0253100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:8067630:8071826:-1 gene:Os03g0253100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phosphomevalonate kinase, ERG8 domain containing protein. (Os03t0253100-01)
Sequence	GCTCGCGATCCTCCTCGGTTCCTCCGCCTCCGTCAGCGACCTCGGAAGGCGGCGGCGCGC GTCGTCGTGCTGCTCTCCGCCGCGCGCCACCCGGCCTTCCCGCAGCTCCGGATCGCGTCC CCCCAGCTGAGCATGGAAGTGGTGGCGTCGGCGCCGGGGAAGGTGCTCGTCGCGGGAGGC TACCTCGTGCTGGAGCGGCCCAACGCCGGCCTCGTCCTCAGCACCAGCGCGCGCTTCTAC GCCATCGTCCGCCCGCTCCGCGACGAGCTCAGCCACGACTCCTGGGCATGGGCGTGGACG GATGTGAAAGTGACCTCTCCTCAGCTCTCCCGGGAGGCCACCTACAAGCTCTCCCTGAAG AAATCAACGCTCCAGTTGACGTCTTCAAGGGAATCTGCAAACCCTTTTGTGGAGCAGGCA GTGCAATTCTCGGTAGCAGCTGCTAAAGTGACTGTCACTGACAAAGAGGGGAAGGAGGCA CTGGACAAGTTGCTTTTGCAAGGTTTGCACATTACAATTTTGGGCTGCAATGATTTCTAT TCTTATAGAAAACAGATTGAAGCACGTGGCCTTCCTCTAACTCCAGAGGTATTGCTTTCG TTGCCTCCATTCTGTTCAATTACATTTAATTCAGAAGTTGCTAATGGAACAATGACTGGA GAAAATTGCAAACCTGAAGTTGCCAAAACTGGACTTGGGTCATCAGCTGCCATGACCACA TCAGTAGTTGCAGCTCTTCTTCACTATCTTGGAACTGTTAACCTTTCATGTTTGGGCCAA TCTTCCGGTGGCAACGCAGCTGGACGAGATCTTGACTTGCTGCATGCTATTGCTCAAAGT GCACATTGTATAGCACAAGGAAAAATTGGCAGTGGGTTTGATGTTAGTGCTGCTGTCTAT GGGAGTCAACGTTACACAAGGTTTTCTCCAGAAATATTATCCTCGGCTCAGGTTACAGGT GGGCACTGCATGGCAGATGTGGTGGCAGATATTGTTACACAGAGTTGGGATCATGAGAAG GTTAAGTTTTCCTTGCCTCCTCTAATGTCCCTTCTTCTAGGGGAACCTGGAACTGGAGGA TCATCCACTCCATCAATGGTTGGATCTGTGAAACAGTGGCAGAAGTCAGACCCTCAGAAA TCCAAGGAGACATGGAGTAAATTGGGGATTGCTAATTCAGTGCTTGAGAACCAACTGAGG AACCTAAACAAACTTGCTGAAGATCACTGGGAAGCCTATGAATCTGTTTTACGATCCTGT AGTCGTCTCACGTGCAGTAAGTGGACAGAGGTGGCTACCAATCAACATCAAGAACTAATT GTTAGATCATTACTGGCCGCAAGAGATGCTTTCCTTGAAATAAGGCTTCATATGCGAGAG ATGGGCATAGCAGCTGGTGTTCCAATTGAGCCAGAATCACAAACTCAACTTCTGGATGCC ACTATGAATATGGAGGGTGTTCTACTAGCTGGAGTTCCTGGGGCCGGTGGCTTTGATGCA GTTTTCTCAGTGATTTTGGGTGAAGCAAGTGATGCTGTAGCCAAAGCTTGGAGCTCAGCT GGTGTTCTCCCTCTTCTTGTTCGAGAAGATCCCCGAGGTGTTTCATTGGAAGCTGGTGAC CCAAGAACAAGGGAGGTGTCAACCGCTGTATCATCGATACAAATAAACTGATAATGTTGT TTGAATTCCGTTAGATTTATTCATGATGTGTACGTTTGGTGTCTCTTTCATGTAGCACTA GCCAAACATGATATGTTGAAGAGGCTACACGCGGACATGGTTAAATAAGTGCTGTGCACG GAGCAAGATATCATGTTGTGACAGATTGATATGATTTAGCCATGTG