Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0251500-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:7982396:7989433:1 gene:Os03g0251500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to T-cell immune regulator 1 transcript variant 3 (Fragment). (Os03t0251500-01)
Sequence	ATGGCGCGCGGCGGGGGCGGCGGGTGCTGCCCGCCGATGGATCTGATGCGGTCGGAGGCG ATGCAGCTGGTGCAGGTCATCATCCCCACGGAGTCGGCGCACCTCACCGTCTCCTACCTC GGCGAACTCGGCCTCCTCCAGTTGAAAGACCTTAACGCAGACAAGAGTCCTTTTCAACGA ACATATGCTGCCCAGATAAAAAGGTGTGGTGAAATGGCTCGCAAATTAAGATTTTTCAAA GAACAAATGTCCAAAGCTGGCATATCAACTTCTGCACAATTAACTGAAATTTCGTTGGAC TTTGATGATTTGGAGATAAAGCTTGGAGAACTGGAAGCTGAACTAGCTGAAGTTAATGCA AACAATGAAAAGTTAAAGCGGACCTACAATGAGCTGTTGGAGTACAGTACTGTTCTTCAA AAGGCTGGTGAATTTTTCTATTCGGCTCAAAGAAGTGCTGCGGCGCAACAGAGAGAAATG GAGGCAAATCAATCTGGTGAGAGTTCACTGGAGAGCCCTCTGCTGGAGCAGGATACGTTA ACAGATGCATCAAAACAAGTGAAGCTTGGATCATTGAGTGGTCTTGTACCAAAGGAAAAG GCAATGGCTTTTGAACGCATCTTATTCCGTGCCACGAGGGGAAACATTTTCCTCAGACAA GAGTCTGTTGATGAACCTGTCACTGACCCAGTCTCTGGAGAAAAGGTTGCCAAAAATGCA TTTGTTATTTTCTACTCTGGGGATAGAGCAAAAGCCAAAATTCTGAAGATATGTGATGCG TTCAACGCAAATCGCTACCCATTTCCAGAAGATGTTGCTAGACAATTACATGCTGTTCAG GAGGTATCTGCAAAGATATCAGAGTTAAAGGCAACAATTGACATGGGATTAGCACATCGT GACAATATATTGAAAAATATCGCGTCTGAGTTTGAGAATTGGAACCGTCTGGCAAATAAG GAAAAAATAATTTACCACACTTTGAACATGTTGAGTGTTGATGTGACAAAGAAATGCTTA GTTGGTGAGGGCTGGAGTCCAGTTTTTGCAACAACTCAGATCCAAGATGCGCTCCAGCGA GCTACTCTTGATAGCAAATCCCAAGTTGGTTCAATTTTTCAAGTTCTCAACACAACAGAA TCTCCCCCGACATATTTCCAGACAAATAAGTTCACTTCGGCTTTCCAGGAAATTGTTGAT GCATACGGGATAGCCAAATATCAAGAAGCAAACCCTGGTGTATTCACTATTGTCACTTTT CCTTTCTTATTTGCTGTCATGTTTGGAGATTGGGGACATGGAATTTGCATATTGGTTTCG ACACTCTATCTGATAATCCGAGAGAAGAAATTTGCTTCACAGAAACTTGGAGACATAATG GAGATGATGTTTGGTGGGCGCTATGTAATTATAATGATGGCACTCTTTTCAATCTATACA GGATTAATATACAATGAATTTTTCTCTGTTCCATTTGAGCTTTTTGGTAAATCTGCTTAT GCATGCCGTGATCCTTCTTGTGGAGATGCTGCAACAGAAGGATTACTCAAGGTAAGACGG ACATACCCTTTTGGTGTGGACCCTGTATGGCATGGCAGCCGCAGCGAGTTGCCGTTTCTC AACTCACTGAAGATGAAGATGTCAATTCTTCTTGGAGTTGCACAAATGAACCTTGGAATT GTGATTAGTTACTTTAATGCGAAATTCTTCAGGAACAGTGTTAATGTGTGGTACCAGTTC ATCCCCCAGCTGATCTTCTTGAACAGCTTATTTGGTTACTTATCCATGCTCATCATTATC AAGTGGAGCACGGGGGCAAAAGCAGATCTGTACCATACTATGATATATATGTTCCTCAGT CCAACAGATGAACTTGGGGAGAACCAATTATTTCCTGGACAGAAAACAGTGCAGCTTGTT TTACTTCTGCTTGCTCTGGTGTCTGTTCCCTGGATGCTGATCCCAAAGCCATTTTTCTTG AAGATGGAGCATGAGCGAAGGCATCAAGGACAACAATATGCAATGCTTCAGAGCACAGAT GACTCAGTGGTAGCGGAGATGGGACATCATAATGGCTCGAACCACCATGAGGAGTTCGAG TTCAGTGAAGTTTTTGTTCACCAGTTGATCCACACAATTGAGTTTGTTCTTGGGGCAGTC TCAAATACAGCCTCATATCTTCGTCTCTGGGCTCTCAGTCTTGCACACTCGGAGTTGTCA AGTGTATTCTATGACAAGGTTCTCCTCCTAGCTTTCGGGTACAACAACATTCTTATCCGC ATCGCTGGCATTACCATCTTCATCTGTGCGACAGTTGGTGTCTTGCTTGTTATGGAGACC CTAAGTGCATTCCTTCACGCCTTAAGGCTACATTGGGTGGAGTTCCAGAACAAATTCTAT GAGGGCGATGGATACAAGTTTGCGCCCTTCTCTTTCGCACTGATCAGTGAAGAGGAAGAC TGA

Peptide Sequence

PEP ID	Os03t0251500-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:7982396:7989433:1 gene:Os03g0251500 transcript:Os03t0251500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to T-cell immune regulator 1 transcript variant 3 (Fragment). (Os03t0251500-01)
Sequence	MARGGGGGCCPPMDLMRSEAMQLVQVIIPTESAHLTVSYLGELGLLQLKDLNADKSPFQR TYAAQIKRCGEMARKLRFFKEQMSKAGISTSAQLTEISLDFDDLEIKLGELEAELAEVNA NNEKLKRTYNELLEYSTVLQKAGEFFYSAQRSAAAQQREMEANQSGESSLESPLLEQDTL TDASKQVKLGSLSGLVPKEKAMAFERILFRATRGNIFLRQESVDEPVTDPVSGEKVAKNA FVIFYSGDRAKAKILKICDAFNANRYPFPEDVARQLHAVQEVSAKISELKATIDMGLAHR DNILKNIASEFENWNRLANKEKIIYHTLNMLSVDVTKKCLVGEGWSPVFATTQIQDALQR ATLDSKSQVGSIFQVLNTTESPPTYFQTNKFTSAFQEIVDAYGIAKYQEANPGVFTIVTF PFLFAVMFGDWGHGICILVSTLYLIIREKKFASQKLGDIMEMMFGGRYVIIMMALFSIYT GLIYNEFFSVPFELFGKSAYACRDPSCGDAATEGLLKVRRTYPFGVDPVWHGSRSELPFL NSLKMKMSILLGVAQMNLGIVISYFNAKFFRNSVNVWYQFIPQLIFLNSLFGYLSMLIII KWSTGAKADLYHTMIYMFLSPTDELGENQLFPGQKTVQLVLLLLALVSVPWMLIPKPFFL KMEHERRHQGQQYAMLQSTDDSVVAEMGHHNGSNHHEEFEFSEVFVHQLIHTIEFVLGAV SNTASYLRLWALSLAHSELSSVFYDKVLLLAFGYNNILIRIAGITIFICATVGVLLVMET LSAFLHALRLHWVEFQNKFYEGDGYKFAPFSFALISEEED

Transcript Sequence

Transcript ID	Os03t0251500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:7982396:7989433:1 gene:Os03g0251500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to T-cell immune regulator 1 transcript variant 3 (Fragment). (Os03t0251500-01)
Sequence	GTCTCCCCGTTCAGCGAGCCAGAGAGGAAACGAACCGATCGATCAGGCCGTCGCTCCGCT CGCCGCCGCGCGACGCGACGCGACGCGACACGCCGGAGACGGACGACGAGCGCTTTGCCT TCCCCGCGCGCGCGCGCGCGCGCACGGAGGCGGACGCTGGTCGGTTTGGTCGGGTGCGAC CGGGAACGGCGGCCATGGCGCGCGGCGGGGGCGGCGGGTGCTGCCCGCCGATGGATCTGA TGCGGTCGGAGGCGATGCAGCTGGTGCAGGTCATCATCCCCACGGAGTCGGCGCACCTCA CCGTCTCCTACCTCGGCGAACTCGGCCTCCTCCAGTTGAAAGACCTTAACGCAGACAAGA GTCCTTTTCAACGAACATATGCTGCCCAGATAAAAAGGTGTGGTGAAATGGCTCGCAAAT TAAGATTTTTCAAAGAACAAATGTCCAAAGCTGGCATATCAACTTCTGCACAATTAACTG AAATTTCGTTGGACTTTGATGATTTGGAGATAAAGCTTGGAGAACTGGAAGCTGAACTAG CTGAAGTTAATGCAAACAATGAAAAGTTAAAGCGGACCTACAATGAGCTGTTGGAGTACA GTACTGTTCTTCAAAAGGCTGGTGAATTTTTCTATTCGGCTCAAAGAAGTGCTGCGGCGC AACAGAGAGAAATGGAGGCAAATCAATCTGGTGAGAGTTCACTGGAGAGCCCTCTGCTGG AGCAGGATACGTTAACAGATGCATCAAAACAAGTGAAGCTTGGATCATTGAGTGGTCTTG TACCAAAGGAAAAGGCAATGGCTTTTGAACGCATCTTATTCCGTGCCACGAGGGGAAACA TTTTCCTCAGACAAGAGTCTGTTGATGAACCTGTCACTGACCCAGTCTCTGGAGAAAAGG TTGCCAAAAATGCATTTGTTATTTTCTACTCTGGGGATAGAGCAAAAGCCAAAATTCTGA AGATATGTGATGCGTTCAACGCAAATCGCTACCCATTTCCAGAAGATGTTGCTAGACAAT TACATGCTGTTCAGGAGGTATCTGCAAAGATATCAGAGTTAAAGGCAACAATTGACATGG GATTAGCACATCGTGACAATATATTGAAAAATATCGCGTCTGAGTTTGAGAATTGGAACC GTCTGGCAAATAAGGAAAAAATAATTTACCACACTTTGAACATGTTGAGTGTTGATGTGA CAAAGAAATGCTTAGTTGGTGAGGGCTGGAGTCCAGTTTTTGCAACAACTCAGATCCAAG ATGCGCTCCAGCGAGCTACTCTTGATAGCAAATCCCAAGTTGGTTCAATTTTTCAAGTTC TCAACACAACAGAATCTCCCCCGACATATTTCCAGACAAATAAGTTCACTTCGGCTTTCC AGGAAATTGTTGATGCATACGGGATAGCCAAATATCAAGAAGCAAACCCTGGTGTATTCA CTATTGTCACTTTTCCTTTCTTATTTGCTGTCATGTTTGGAGATTGGGGACATGGAATTT GCATATTGGTTTCGACACTCTATCTGATAATCCGAGAGAAGAAATTTGCTTCACAGAAAC TTGGAGACATAATGGAGATGATGTTTGGTGGGCGCTATGTAATTATAATGATGGCACTCT TTTCAATCTATACAGGATTAATATACAATGAATTTTTCTCTGTTCCATTTGAGCTTTTTG GTAAATCTGCTTATGCATGCCGTGATCCTTCTTGTGGAGATGCTGCAACAGAAGGATTAC TCAAGGTAAGACGGACATACCCTTTTGGTGTGGACCCTGTATGGCATGGCAGCCGCAGCG AGTTGCCGTTTCTCAACTCACTGAAGATGAAGATGTCAATTCTTCTTGGAGTTGCACAAA TGAACCTTGGAATTGTGATTAGTTACTTTAATGCGAAATTCTTCAGGAACAGTGTTAATG TGTGGTACCAGTTCATCCCCCAGCTGATCTTCTTGAACAGCTTATTTGGTTACTTATCCA TGCTCATCATTATCAAGTGGAGCACGGGGGCAAAAGCAGATCTGTACCATACTATGATAT ATATGTTCCTCAGTCCAACAGATGAACTTGGGGAGAACCAATTATTTCCTGGACAGAAAA CAGTGCAGCTTGTTTTACTTCTGCTTGCTCTGGTGTCTGTTCCCTGGATGCTGATCCCAA AGCCATTTTTCTTGAAGATGGAGCATGAGCGAAGGCATCAAGGACAACAATATGCAATGC TTCAGAGCACAGATGACTCAGTGGTAGCGGAGATGGGACATCATAATGGCTCGAACCACC ATGAGGAGTTCGAGTTCAGTGAAGTTTTTGTTCACCAGTTGATCCACACAATTGAGTTTG TTCTTGGGGCAGTCTCAAATACAGCCTCATATCTTCGTCTCTGGGCTCTCAGTCTTGCAC ACTCGGAGTTGTCAAGTGTATTCTATGACAAGGTTCTCCTCCTAGCTTTCGGGTACAACA ACATTCTTATCCGCATCGCTGGCATTACCATCTTCATCTGTGCGACAGTTGGTGTCTTGC TTGTTATGGAGACCCTAAGTGCATTCCTTCACGCCTTAAGGCTACATTGGGTGGAGTTCC AGAACAAATTCTATGAGGGCGATGGATACAAGTTTGCGCCCTTCTCTTTCGCACTGATCA GTGAAGAGGAAGACTGAGTTTGCGCAATTATTGCATCTATTGTAGCGTGTAATTTCTTGG GGCGTCCTTTTTTCTCAAAGCGTCAAGTATTTATCACGGAAGAATCATAAACCTCCAGTT TGTTCCTTCATCAGGAAAGGGACTAGCAGCATCATTTTTTGCTTTGCTACGAATGATTCG TGGCAAGATGATTTTTTGGGTGGCCGTTGGCACATCGGGTGGCATCACCCTTATTTTGGT GTAAGGCTAATAAATAATAAGTAAATTCTGCACTCGGGTTGCCATTTGGGCAATTAGTTT TCTGCACATAAATAAACATTGTATCAAATGTTAATATTCCATTGGGTTCTTTTATTGTCA ATAAAGAGTGCGGCCTACATTCTTT