Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0249900-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:7911693:7914268:1 gene:Os03g0249900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os03t0249900-01);Hypothetical conserved gene. (Os03t0249900-02)
Sequence

ATGGCCGGAGAAGACGCCGCCGCCGCCGCTTCCGCTGGCGCCGCAGCGGTCCAGAGGCGC
CCGAAGGTGGTGGAAGAAGACGACGATGAAGACGATTTCGTGCCGCTCTCGCATGCCCGG
GGAAGGAAGAAAGCGAGCGGTGCGGCCGCCCCCAAGTATAAAGAGGAGGAGGAGGAAGAC
GAGGATGACGATGAAGAGGACAACGTGCCGCTCGCGGTTTCTCGGGCCAAGAAGGCGGGC
AATGCGGGTGCCTCCAAGGCCAAGAAGGACGAGGACGACAGCGGCGACGATGACGACGAC
TACCACGTGCCGCTCTCGCGGTCCAATAAGGGAAAAGAGAAGCAGAAAAGCACCGTTAAG
GCTAAGGTTAAGAAGGAAGAAACCGATTCCGATGATGAACGCAAGCCAAAGGCGCAGAAG
AAAAGTTCAGCTGTGACCAAGACCTCCAAGGTTAAGAAAATAAAAGATGAGGATCTGGAA
ATCGATACCAAGAAAATAAAGAAGGGTGCTGCCACTAGAAAGGGAGATGCAGAGAAGGTG
AAGAAAGAGAAAAAGGTGTATGATTTGCCAGGGCAGAAGCATGATCCTCCTCAAGAAAGG
GATCCACTGAGGATATTCTATGAATCGCTCTATGAGCAGGTGCCCACTAGTGAAATGGCT
GCAATCTGGTTGATGGAATGGGGTTTACTCCCAGTGGATGTGGCTCAAAAGGTCTTTGAG
AAGAAACAGGGCCAGAAACTGAAGTCGCCAGTGAAAACAACCTCTGCAAAGAGAAGGCCA
GACACTCCAACCAAAAAGCCACAGTTGTCATCTGCTACAAAAACCAACTCAGCCGTAAAG
GATTCTGGAAAAACTACCGCGCAGAAGAAGAGGAGGGCAAGCAGTGACACAGATGATGAC
GATGATGACTTCATTGTTTCTAAGACGAAGACCAAAATGCAAAAGATGAATAGCTAG

Peptide Sequence

PEP ID

Os03t0249900-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:7911693:7914268:1 gene:Os03g0249900 transcript:Os03t0249900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os03t0249900-01);Hypothetical conserved gene. (Os03t0249900-02)
Sequence

MAGEDAAAAASAGAAAVQRRPKVVEEDDDEDDFVPLSHARGRKKASGAAAPKYKEEEEED
EDDDEEDNVPLAVSRAKKAGNAGASKAKKDEDDSGDDDDDYHVPLSRSNKGKEKQKSTVK
AKVKKEETDSDDERKPKAQKKSSAVTKTSKVKKIKDEDLEIDTKKIKKGAATRKGDAEKV
KKEKKVYDLPGQKHDPPQERDPLRIFYESLYEQVPTSEMAAIWLMEWGLLPVDVAQKVFE
KKQGQKLKSPVKTTSAKRRPDTPTKKPQLSSATKTNSAVKDSGKTTAQKKRRASSDTDDD
DDDFIVSKTKTKMQKMNS

Transcript Sequence

Transcript ID

Os03t0249900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:7911693:7914268:1 gene:Os03g0249900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os03t0249900-01);Hypothetical conserved gene. (Os03t0249900-02)
Sequence

GTCACGCTCGGCCTTGCGGTCTCGCTTCTCCCCCAATTCCAGCCGCGAAAAATCCGAAAA
CCCTCGCCCCCACCCTAGCGATGGCCGGAGAAGACGCCGCCGCCGCCGCTTCCGCTGGCG
CCGCAGCGGTCCAGAGGCGCCCGAAGGTGGTGGAAGAAGACGACGATGAAGACGATTTCG
TGCCGCTCTCGCATGCCCGGGGAAGGAAGAAAGCGAGCGGTGCGGCCGCCCCCAAGTATA
AAGAGGAGGAGGAGGAAGACGAGGATGACGATGAAGAGGACAACGTGCCGCTCGCGGTTT
CTCGGGCCAAGAAGGCGGGCAATGCGGGTGCCTCCAAGGCCAAGAAGGACGAGGACGACA
GCGGCGACGATGACGACGACTACCACGTGCCGCTCTCGCGGTCCAATAAGGGAAAAGAGA
AGCAGAAAAGCACCGTTAAGGCTAAGGTTAAGAAGGAAGAAACCGATTCCGATGATGAAC
GCAAGCCAAAGGCGCAGAAGAAAAGTTCAGCTGTGACCAAGACCTCCAAGGTTAAGAAAA
TAAAAGATGAGGATCTGGAAATCGATACCAAGAAAATAAAGAAGGGTGCTGCCACTAGAA
AGGGAGATGCAGAGAAGGTGAAGAAAGAGAAAAAGGTGTATGATTTGCCAGGGCAGAAGC
ATGATCCTCCTCAAGAAAGGGATCCACTGAGGATATTCTATGAATCGCTCTATGAGCAGG
TGCCCACTAGTGAAATGGCTGCAATCTGGTTGATGGAATGGGGTTTACTCCCAGTGGATG
TGGCTCAAAAGGTCTTTGAGAAGAAACAGGGCCAGAAACTGAAGTCGCCAGTGAAAACAA
CCTCTGCAAAGAGAAGGCCAGACACTCCAACCAAAAAGCCACAGTTGTCATCTGCTACAA
AAACCAACTCAGCCGTAAAGGATTCTGGAAAAACTACCGCGCAGAAGAAGAGGAGGGCAA
GCAGTGACACAGATGATGACGATGATGACTTCATTGTTTCTAAGACGAAGACCAAAATGC
AAAAGATGAATAGCTAGGGGTATCATCCTTGGCATAATTGCTGAATCAGGGTAACCTTAG
GAAAAGATGAGAGATTTTCCCTTTCCATGTACTGACATGCATGAGCATCTGGATACTGAA
GTGAAGGAATGCACTGCTTAGAAGTTCCACCTGTTGCTTAGTTCTGGAATGACAATGGTT
TTCCTGACCAGAATGAAGGGAAAATGTTTCAAATT