Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0249500-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:7889338:7891292:1 gene:Os03g0249500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:UDP-glucuronic acid 4-epimerase 1 description:Similar to Nucleotide sugar epimerase-like protein (UDP-D-glucuronate 4- epimerase) (EC 5.1.3.6). (Os03t0249500-01)
Sequence	ATGGCGCCGCAGCTGACCGGCGCGCCCGGCACGGCGGGGGCGGCGGGCGGCGCGGCGTCC GTCAAGCCGCAGTTCCACCACTTCCACCACCACCGCCTCGCCACGCGCCACCACCACCCC TCGCCGACCTCGCTCCTCTCCAAGCTCGCCTTCTGGTCCGTCTGCTCCCTCTCGCTCCTC CTCGCCTTCCTCCTCCTCTCCCCCTCCGCCGCGCCGGCCCCGCGGGCGGCGCCCGACTCC CCGCGCCGCTCCCTCCACACGTCCTCCCCGTCCGCCGCCGCCACGTGGGGCGGCGCCGCA TGGGAGAAGAAGGTGCGGGCGTCCGCGCGCGTCAGGCGGGCCAACGGGCGGGGGCTCACC GTCCTCGTCACGGGCGCCGCGGGCTTCGTCGGCTGCCACGCGGCCGCCGCCCTCCGCCGC CGCGGCGACGGCGTGCTTGGGCTGGACAACTTCAACGACTACTACGACCCCGCCCTCAAG CGGGGCCGCGCCGCGCTCCTCGCCCGCTCGGGGGTCTACGTCGTCGACGGCGACATCGCC GATGCGGAGCTCCTCGCCAAGCTGTTCGACGTCGTGCCGTTCACCCACGTCCTCCACCTC GCCGCTCAGGCGGGCGTTCGGCACGCGCTCGTTGACCCGATGTCCTACGTGCGCGCCAAC GTCGGCGGGTTCGTGGCGCTGCTCGAGGCGGCGCGCATGGCGAATCCCCAGCCGGCGATC GTCTGGGCGTCGTCGTCTTCAGTGTACGGGCTCAACTCCCATGTGCCTTTCTCCGAACAT GACAGGACGGACCGACCCGCCTCTCTGTATGCAGCGACCAAGAAGGCCGGTGAGGAGATC GCTCATGCCTACAACCACATCTATGGGCTCTCGCTCACGGCGCTCCGTTTCTTCACCGTG TATGGGCCGTGGGGGCGCCCAGACATGGCATACTTCTTCTTCACCCGGGACATTCTTGCT GGTCGGCCAATCACCGTGTATGAAAGTGCAGGTGGAGGCACACACCAGACCACCATTTCC CGAGATTTCACCTATATTGATGACATTGTGAAGGGGTGTGTTGGGGCATTGGATACAGCC GGGCGTAGCACAGGCAGTGGAGGCAAGAAGCGAGGGCCGGCACCATTCAGGACATACAAT TTGGGGAACACATCTCCTGTGCCGGTGACACAGCTGGTGGATTTACTGGAGAAGTTGCTC AAGGTGAAAGCGGTGAGGAAGATTGTCAAGATGCCAAGGAATGGTGATGTGCCATATACA CATGCTAACATCAGTCTTGCTCAGCGGGAGCTTGGGTACCGACCGTCAACTGATCTTCAA ACAGGGGTTAAGAAGTTTGTGCGGTGGTATCTCGAGTACTACATGCCTGGGTTTGCTGGT AAGCAGAAGCAGCATGGCAGTAGCAACAGCAAGTCTTCGCGAGGTCGGAGTGGCAACACA AGCAGTGCAAGATGA

Peptide Sequence

PEP ID	Os03t0249500-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:7889338:7891292:1 gene:Os03g0249500 transcript:Os03t0249500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:UDP-glucuronic acid 4-epimerase 1 description:Similar to Nucleotide sugar epimerase-like protein (UDP-D-glucuronate 4- epimerase) (EC 5.1.3.6). (Os03t0249500-01)
Sequence	MAPQLTGAPGTAGAAGGAASVKPQFHHFHHHRLATRHHHPSPTSLLSKLAFWSVCSLSLL LAFLLLSPSAAPAPRAAPDSPRRSLHTSSPSAAATWGGAAWEKKVRASARVRRANGRGLT VLVTGAAGFVGCHAAAALRRRGDGVLGLDNFNDYYDPALKRGRAALLARSGVYVVDGDIA DAELLAKLFDVVPFTHVLHLAAQAGVRHALVDPMSYVRANVGGFVALLEAARMANPQPAI VWASSSSVYGLNSHVPFSEHDRTDRPASLYAATKKAGEEIAHAYNHIYGLSLTALRFFTV YGPWGRPDMAYFFFTRDILAGRPITVYESAGGGTHQTTISRDFTYIDDIVKGCVGALDTA GRSTGSGGKKRGPAPFRTYNLGNTSPVPVTQLVDLLEKLLKVKAVRKIVKMPRNGDVPYT HANISLAQRELGYRPSTDLQTGVKKFVRWYLEYYMPGFAGKQKQHGSSNSKSSRGRSGNT SSAR

Transcript Sequence

Transcript ID	Os03t0249500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:7889338:7891292:1 gene:Os03g0249500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:UDP-glucuronic acid 4-epimerase 1 description:Similar to Nucleotide sugar epimerase-like protein (UDP-D-glucuronate 4- epimerase) (EC 5.1.3.6). (Os03t0249500-01)
Sequence	AACCCCACCCAAATTCGCGAGATCCGACGAGGAGCTCAATCCACATTGCGGCAGATCGGG AGATGGCGCCGCAGCTGACCGGCGCGCCCGGCACGGCGGGGGCGGCGGGCGGCGCGGCGT CCGTCAAGCCGCAGTTCCACCACTTCCACCACCACCGCCTCGCCACGCGCCACCACCACC CCTCGCCGACCTCGCTCCTCTCCAAGCTCGCCTTCTGGTCCGTCTGCTCCCTCTCGCTCC TCCTCGCCTTCCTCCTCCTCTCCCCCTCCGCCGCGCCGGCCCCGCGGGCGGCGCCCGACT CCCCGCGCCGCTCCCTCCACACGTCCTCCCCGTCCGCCGCCGCCACGTGGGGCGGCGCCG CATGGGAGAAGAAGGTGCGGGCGTCCGCGCGCGTCAGGCGGGCCAACGGGCGGGGGCTCA CCGTCCTCGTCACGGGCGCCGCGGGCTTCGTCGGCTGCCACGCGGCCGCCGCCCTCCGCC GCCGCGGCGACGGCGTGCTTGGGCTGGACAACTTCAACGACTACTACGACCCCGCCCTCA AGCGGGGCCGCGCCGCGCTCCTCGCCCGCTCGGGGGTCTACGTCGTCGACGGCGACATCG CCGATGCGGAGCTCCTCGCCAAGCTGTTCGACGTCGTGCCGTTCACCCACGTCCTCCACC TCGCCGCTCAGGCGGGCGTTCGGCACGCGCTCGTTGACCCGATGTCCTACGTGCGCGCCA ACGTCGGCGGGTTCGTGGCGCTGCTCGAGGCGGCGCGCATGGCGAATCCCCAGCCGGCGA TCGTCTGGGCGTCGTCGTCTTCAGTGTACGGGCTCAACTCCCATGTGCCTTTCTCCGAAC ATGACAGGACGGACCGACCCGCCTCTCTGTATGCAGCGACCAAGAAGGCCGGTGAGGAGA TCGCTCATGCCTACAACCACATCTATGGGCTCTCGCTCACGGCGCTCCGTTTCTTCACCG TGTATGGGCCGTGGGGGCGCCCAGACATGGCATACTTCTTCTTCACCCGGGACATTCTTG CTGGTCGGCCAATCACCGTGTATGAAAGTGCAGGTGGAGGCACACACCAGACCACCATTT CCCGAGATTTCACCTATATTGATGACATTGTGAAGGGGTGTGTTGGGGCATTGGATACAG CCGGGCGTAGCACAGGCAGTGGAGGCAAGAAGCGAGGGCCGGCACCATTCAGGACATACA ATTTGGGGAACACATCTCCTGTGCCGGTGACACAGCTGGTGGATTTACTGGAGAAGTTGC TCAAGGTGAAAGCGGTGAGGAAGATTGTCAAGATGCCAAGGAATGGTGATGTGCCATATA CACATGCTAACATCAGTCTTGCTCAGCGGGAGCTTGGGTACCGACCGTCAACTGATCTTC AAACAGGGGTTAAGAAGTTTGTGCGGTGGTATCTCGAGTACTACATGCCTGGGTTTGCTG GTAAGCAGAAGCAGCATGGCAGTAGCAACAGCAAGTCTTCGCGAGGTCGGAGTGGCAACA CAAGCAGTGCAAGATGATTGGATATTCATTTTCTTCATGGCCTTCTTCTGACGGTGTGTA TCATTGTTCTAGATCCAGTGCTTAACTCATCAGGTCTGAGAGGCTCGTTTTGCTCAGCAC GTCCTTCAAGTGAAACAAAACGATCATTAATTAGCTTGTATTGAAAAAACCCTTCCACTC TATTGGCTTCCCCATAGCTGAGCGTTCAAATCCTAGTTCCATTAGCTGGTTCTTAGGATG ACAATTGTAGGAAGAACTGGGTTGGGTTCTGGGGCAGGCTGTGAGTTGCAAAGACTATAA TAGATTCTTTTAGTGACATTTTGTACCACGGGAGAGAAGGAAGTACACCATGACTGTTTC GTTTGTTCAATTGAAATAGCTCTGATCAACCTGCTATCTCTCTGTACTTTGCATTGTCAT GTTACTTTTATAGATGCTCGGTCTGTATTTACTGC