Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0249300-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:7881242:7884214:1 gene:Os03g0249300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nucleotide-sensitive chloride conductance regulator family protein. (Os03t0249300-01)
Sequence

ATGGCGCCAGGGCTCCAGCGCTTCACCGACATCGCCGGGGACGGCGGGCCCCGCCTCGAC
GCCGCCTCCGGCGAGGAGCTCCTCCGCATGGACCGCGCCGCCTCCGTCGCCCTCGGCCGC
CGCGCGCCGGAGCCCCCGGGTACCCTGTTCGTCACCACCAGGAGGGTGATTTGGCTTAGC
GAGACGGAGAAGGGCCAAGGCTATGCGGTGGACTTCCTCGCCATCACGCTCCATGCTGTG
TCGCGCGACCTGGAGGCGTACCCCTCCCCTTGCATCTACACGCAGATTGACGCAGAAGAT
GGCTCTGATGAGGAGGCTGGTGGATCAGATTTCGAAGCAAATGGTGATCTGCAGCTAGCA
AAAGTCTCTGAGATGCGCATTATACTTTCAGACCCTGGTCAACTTGATGCACTTTTCGAT
GTCTTCTGCCATTGTGCTGAACTGAACCCTGATCCTAATGCTGTGCGCAATGAAGAGAAT
GGCTGGTCCGGTGGTGAAAATATGGCTGAGGGTGGGTGGATTCATGGTGATGAAGACATG
ATTGATGGAAATGATCTTGAAGCCCACATGTTCTTTACGAACTTGATAGGCCAAAATGGT
CTACATGACCTTGGTCGTTCTGTACGTGAGCTTCAAATTGATGACCAGCGTTTCGAGGAT
GCTGAGGAAGAAGACGAGATCCAAGAAAATGGACATTAG

Peptide Sequence

PEP ID

Os03t0249300-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:7881242:7884214:1 gene:Os03g0249300 transcript:Os03t0249300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nucleotide-sensitive chloride conductance regulator family protein. (Os03t0249300-01)
Sequence

MAPGLQRFTDIAGDGGPRLDAASGEELLRMDRAASVALGRRAPEPPGTLFVTTRRVIWLS
ETEKGQGYAVDFLAITLHAVSRDLEAYPSPCIYTQIDAEDGSDEEAGGSDFEANGDLQLA
KVSEMRIILSDPGQLDALFDVFCHCAELNPDPNAVRNEENGWSGGENMAEGGWIHGDEDM
IDGNDLEAHMFFTNLIGQNGLHDLGRSVRELQIDDQRFEDAEEEDEIQENGH

Transcript Sequence

Transcript ID

Os03t0249300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:7881242:7884214:1 gene:Os03g0249300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nucleotide-sensitive chloride conductance regulator family protein. (Os03t0249300-01)
Sequence

TCGTAAGCAGAAGAAGCGCGCTGTCCACTGTCCACACCCGCACACGCCGCTTCCCACCAC
GGCGGCGCTAAACCCTTTCGAAAGAATCCCCAAATCTCCCACGCTCCAAAGCCCGAAACC
CTAGCTCCTGTTCACATGGCGCCAGGGCTCCAGCGCTTCACCGACATCGCCGGGGACGGC
GGGCCCCGCCTCGACGCCGCCTCCGGCGAGGAGCTCCTCCGCATGGACCGCGCCGCCTCC
GTCGCCCTCGGCCGCCGCGCGCCGGAGCCCCCGGGTACCCTGTTCGTCACCACCAGGAGG
GTGATTTGGCTTAGCGAGACGGAGAAGGGCCAAGGCTATGCGGTGGACTTCCTCGCCATC
ACGCTCCATGCTGTGTCGCGCGACCTGGAGGCGTACCCCTCCCCTTGCATCTACACGCAG
ATTGACGCAGAAGATGGCTCTGATGAGGAGGCTGGTGGATCAGATTTCGAAGCAAATGGT
GATCTGCAGCTAGCAAAAGTCTCTGAGATGCGCATTATACTTTCAGACCCTGGTCAACTT
GATGCACTTTTCGATGTCTTCTGCCATTGTGCTGAACTGAACCCTGATCCTAATGCTGTG
CGCAATGAAGAGAATGGCTGGTCCGGTGGTGAAAATATGGCTGAGGGTGGGTGGATTCAT
GGTGATGAAGACATGATTGATGGAAATGATCTTGAAGCCCACATGTTCTTTACGAACTTG
ATAGGCCAAAATGGTCTACATGACCTTGGTCGTTCTGTACGTGAGCTTCAAATTGATGAC
CAGCGTTTCGAGGATGCTGAGGAAGAAGACGAGATCCAAGAAAATGGACATTAGAAGCAG
AATGTTCATTTTACTTGTTCCGTTCCTTGAGGGGACTATGTCATTGGTTCGTCTGTAGAT
TACCACTGATGCTGCTTGGTTCGCAATACTTGCTTCTTCTACTTCCTTTCCCTCTTTCTT
GTTCTATAGGATCAACATCTCTAGGGAGCATCGATGGTAACTTTTGTGAGAAAAAGGTCT
TGCTGCTGGTCAAGAATGTAACTTGTAGAGCATGATGGTGAATCGAGTGAAATTAGTTCG
ATACTTTTGATCTGACAGATAGGAGGGGAAATCGGGAAAAGAAATATGTTCTCTTTTCCC
TTGTATATCATGGCACTGTTGTGTTATCATTTAGGATTTAAAGATTTAAATGCC