Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0249100-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:7871494:7873366:1 gene:Os03g0249100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os03t0249100-01)
Sequence

ATGGTCTCCTCTCCCTCGCCTTCCTCTCCCTTCCCCGCCGCAGCAGTATCCGACGCGAGG
CGGGCCGGCGGTGGCAGGACGACGGCCTCGGAGGTGGACGAGAAGTACGCGCACGTCGCG
ACGCCACTCCACAACCACCGCGGGGGGAGCGGGGGTGCCAAGAAGACGCCGCGGCGAGCG
AAGAGCGAAGGAGGAGGCGGAGCGGACCCCGCGGCGTACGTCGCGGCGGTGTCCTGCTCT
GACTGCCGCTTCAAGCAGCGGCTCCACGCGCCGGCGTCGCCTGGCCCTGGGGCGGTCATC
CGCTCGCTGTTCGTGTCACTCACCCGACGATCCACGCCGCGGTCGTCGCCGTCGCCGACG
TCGGCGTCCGGTGGGGACGGAGGGGAGAGCGAGCAGTGGCGCCTGGCCGCGGCCGACCTC
TCGCGGCGGCTCGCGGCGGCGACGCGCACGCGGGACGAGGCGCTGGAGGAGACCACGCGG
CTGAAGCACTCCCTCACCGAGCTGGAGATGAAGCTCGCGCGCCTCGAGGCCCGCGTGCTC
CCCACTCCCACGGCCGCCGCCTTCCCCGTCGAGTCGTTCCTCCGGGCGGTGTCGACAGCG
CGAGCCGCCGTGCGGAGCCTCACGCGGGCTCTCTCCAATCACCTCCGCAGCCCGGTGAAC
CCCGGCCCGAACCTCGAGAGCTTCCTGAACCGCGCGTTCCACGCCGACTTCGAGCTCGAC
ACCGAGGGCGACGTGCACACGGCGGACCCGGCGGGCCGCTGCGAGGCCAACCTCGCGGCG
TACCACTCCATCGCGGCGCTGACGTGGGAGGAGGTCCTCCTCCACGGTACCAAGCACTAC
AGCGAGGGCCTGAGCCGGTTCTGCGACGCCAAGATGAGCGAGGTGGTTTCCTCCCTCGGT
TGGGCGCGCGCCCGCGCCTGGCCGGAGCCGCTGCTGCAGGCGTTCTTCCTGGCCGCCAAG
GGCGTGTGGGGGGTGCGCCTCCTCGCGCGGTCCGTCCACCCGCCGCTGCCCGTGGTGCGC
GTCGACCGCGGCGCGCGCTTCGACTCGCGGTTCATGGAGGACGCGGCCGCCGGGCGCGCC
GGGAAGCTGGAGCCGGCAAGCGTGAAGATGATGGTGGCGCCGGGGTTCCACGTGTACGTC
GCCTGCGCCGGCGTGGTGAAGTGCAAGGTGGTGTGCTTCTACAGCAGCAGCAGCAGCAGC
CGCACCGGCGGCCACAGAGATGGCGGGAGCATCGCCAACGGGTCTGTGGGGTTGGGGAGT
AGCTGTAGCGATGTGAATGGGAGTGCTACAGACGCGGTGGATGGTTGTAATAATCAGAGC
AGTAGCGTAGTTACATAG

Peptide Sequence

PEP ID

Os03t0249100-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:7871494:7873366:1 gene:Os03g0249100 transcript:Os03t0249100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os03t0249100-01)
Sequence

MVSSPSPSSPFPAAAVSDARRAGGGRTTASEVDEKYAHVATPLHNHRGGSGGAKKTPRRA
KSEGGGGADPAAYVAAVSCSDCRFKQRLHAPASPGPGAVIRSLFVSLTRRSTPRSSPSPT
SASGGDGGESEQWRLAAADLSRRLAAATRTRDEALEETTRLKHSLTELEMKLARLEARVL
PTPTAAAFPVESFLRAVSTARAAVRSLTRALSNHLRSPVNPGPNLESFLNRAFHADFELD
TEGDVHTADPAGRCEANLAAYHSIAALTWEEVLLHGTKHYSEGLSRFCDAKMSEVVSSLG
WARARAWPEPLLQAFFLAAKGVWGVRLLARSVHPPLPVVRVDRGARFDSRFMEDAAAGRA
GKLEPASVKMMVAPGFHVYVACAGVVKCKVVCFYSSSSSSRTGGHRDGGSIANGSVGLGS
SCSDVNGSATDAVDGCNNQSSSVVT

Transcript Sequence

Transcript ID

Os03t0249100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:7871494:7873366:1 gene:Os03g0249100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os03t0249100-01)
Sequence

CAAAAAAAAATGGACGTCGTCACACACGCGGGCAGGCACCACCGCACCAGTACACCACCA
CCATCGCCCCGCCCCGCATCGCGCCCCACAGCGCCATCGCCTCGCCTGTCGCCACCAGCA
CACGGCAGGCACAGGCACCACCGCCCCTCTGAACCCGAGAAAACCCCTACTTGACTCGCC
ACGCTCCCCGCTAATCGCAACCAGACGGAGTTGTCCTTGGTGTAGTTGGCCAGCGCGCCC
AGGCAGGGGGTAGAGCGAGCTCGCCGAGCTCGAGCTCGATCCATCGCCCGCCAGCCATGG
TCTCCTCTCCCTCGCCTTCCTCTCCCTTCCCCGCCGCAGCAGTATCCGACGCGAGGCGGG
CCGGCGGTGGCAGGACGACGGCCTCGGAGGTGGACGAGAAGTACGCGCACGTCGCGACGC
CACTCCACAACCACCGCGGGGGGAGCGGGGGTGCCAAGAAGACGCCGCGGCGAGCGAAGA
GCGAAGGAGGAGGCGGAGCGGACCCCGCGGCGTACGTCGCGGCGGTGTCCTGCTCTGACT
GCCGCTTCAAGCAGCGGCTCCACGCGCCGGCGTCGCCTGGCCCTGGGGCGGTCATCCGCT
CGCTGTTCGTGTCACTCACCCGACGATCCACGCCGCGGTCGTCGCCGTCGCCGACGTCGG
CGTCCGGTGGGGACGGAGGGGAGAGCGAGCAGTGGCGCCTGGCCGCGGCCGACCTCTCGC
GGCGGCTCGCGGCGGCGACGCGCACGCGGGACGAGGCGCTGGAGGAGACCACGCGGCTGA
AGCACTCCCTCACCGAGCTGGAGATGAAGCTCGCGCGCCTCGAGGCCCGCGTGCTCCCCA
CTCCCACGGCCGCCGCCTTCCCCGTCGAGTCGTTCCTCCGGGCGGTGTCGACAGCGCGAG
CCGCCGTGCGGAGCCTCACGCGGGCTCTCTCCAATCACCTCCGCAGCCCGGTGAACCCCG
GCCCGAACCTCGAGAGCTTCCTGAACCGCGCGTTCCACGCCGACTTCGAGCTCGACACCG
AGGGCGACGTGCACACGGCGGACCCGGCGGGCCGCTGCGAGGCCAACCTCGCGGCGTACC
ACTCCATCGCGGCGCTGACGTGGGAGGAGGTCCTCCTCCACGGTACCAAGCACTACAGCG
AGGGCCTGAGCCGGTTCTGCGACGCCAAGATGAGCGAGGTGGTTTCCTCCCTCGGTTGGG
CGCGCGCCCGCGCCTGGCCGGAGCCGCTGCTGCAGGCGTTCTTCCTGGCCGCCAAGGGCG
TGTGGGGGGTGCGCCTCCTCGCGCGGTCCGTCCACCCGCCGCTGCCCGTGGTGCGCGTCG
ACCGCGGCGCGCGCTTCGACTCGCGGTTCATGGAGGACGCGGCCGCCGGGCGCGCCGGGA
AGCTGGAGCCGGCAAGCGTGAAGATGATGGTGGCGCCGGGGTTCCACGTGTACGTCGCCT
GCGCCGGCGTGGTGAAGTGCAAGGTGGTGTGCTTCTACAGCAGCAGCAGCAGCAGCCGCA
CCGGCGGCCACAGAGATGGCGGGAGCATCGCCAACGGGTCTGTGGGGTTGGGGAGTAGCT
GTAGCGATGTGAATGGGAGTGCTACAGACGCGGTGGATGGTTGTAATAATCAGAGCAGTA
GCGTAGTTACATAGGTAAAACAAACACGACCATTTTTTTTACTGTATTTGTGTGGTTAAA
ACAGGACCTGCATTTTTACTTTTGTGTGAATACGGGGGACTTTGTCCCAACTTTATGTTG
ATTTCGTTCGTGTTTGTAGCTTTGATTTGTTGAGTAAAGACAGTTTTTGTTTGGC